Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32697 | Canola | nucleus | 97.79 | 100.0 |
| Bra020365.1-P | Field mustard | nucleus | 99.45 | 99.45 |
| CDY32977 | Canola | nucleus, plastid | 87.85 | 86.89 |
| CDY61050 | Canola | nucleus | 87.29 | 86.34 |
| AT5G58500.1 | Thale cress | nucleus | 86.74 | 86.26 |
| CDY10712 | Canola | cytosol, nucleus, plastid | 56.35 | 61.82 |
| CDY52287 | Canola | nucleus | 67.4 | 61.62 |
| CDY20312 | Canola | nucleus | 67.4 | 61.62 |
| CDX94980 | Canola | nucleus | 67.4 | 61.62 |
| CDY09940 | Canola | nucleus | 67.4 | 61.62 |
| CDY59064 | Canola | nucleus | 66.85 | 61.11 |
| CDY32978 | Canola | cytosol, nucleus, plastid | 62.98 | 60.96 |
| CDY10247 | Canola | nucleus, plastid | 66.3 | 60.61 |
| CDY06675 | Canola | nucleus, plastid | 66.3 | 60.61 |
| CDY02038 | Canola | cytosol | 54.7 | 60.37 |
| CDY69731 | Canola | plastid | 62.43 | 57.95 |
| CDY35523 | Canola | plastid | 61.88 | 57.44 |
| CDY47983 | Canola | nucleus | 55.8 | 57.39 |
| CDX85083 | Canola | plastid | 62.98 | 57.29 |
| KRH72732 | Soybean | nucleus | 69.06 | 57.08 |
| CDY14848 | Canola | nucleus | 55.8 | 57.06 |
| CDX77531 | Canola | plastid | 62.43 | 56.78 |
| OQU83235 | Sorghum | cytosol | 54.7 | 56.25 |
| CDY55387 | Canola | nucleus | 54.7 | 55.62 |
| VIT_06s0004g07090.t01 | Wine grape | nucleus | 70.72 | 55.41 |
| KRH17088 | Soybean | nucleus | 66.3 | 55.05 |
| PGSC0003DMT400078091 | Potato | nucleus | 67.4 | 54.71 |
| Solyc06g082210.1.1 | Tomato | nucleus | 66.85 | 54.5 |
| CDY57024 | Canola | nucleus, plastid | 57.46 | 54.17 |
| CDY52479 | Canola | nucleus, plastid | 56.35 | 53.68 |
| CDX86199 | Canola | plastid | 56.91 | 53.65 |
| CDY64755 | Canola | nucleus, plastid | 56.35 | 53.12 |
| CDY63294 | Canola | nucleus | 53.59 | 52.72 |
| KRG98226 | Soybean | nucleus | 67.4 | 52.59 |
| CDY10790 | Canola | nucleus | 62.43 | 52.56 |
| CDY52505 | Canola | nucleus, plastid | 55.25 | 52.36 |
| CDY05593 | Canola | nucleus, plastid | 55.25 | 52.36 |
| CDY24755 | Canola | nucleus, plastid | 61.33 | 51.63 |
| CDY57088 | Canola | nucleus | 61.88 | 51.61 |
| CDY57087 | Canola | nucleus | 61.88 | 51.61 |
| CDY15426 | Canola | nucleus | 61.88 | 51.61 |
| CDX74186 | Canola | nucleus, plastid | 54.14 | 51.58 |
| CDY06030 | Canola | nucleus | 51.38 | 51.38 |
| CDX87760 | Canola | nucleus | 50.83 | 51.11 |
| CDY21126 | Canola | nucleus, plastid | 53.59 | 51.05 |
| CDY30000 | Canola | nucleus, plastid | 53.59 | 51.05 |
| KRH30185 | Soybean | nucleus | 65.75 | 50.64 |
| CDY49331 | Canola | nucleus, plastid | 54.14 | 50.0 |
| CDY42932 | Canola | nucleus, plastid | 54.14 | 49.75 |
| CDX77619 | Canola | cytosol | 26.52 | 48.98 |
| CDX88480 | Canola | nucleus | 49.72 | 48.65 |
| CDY67351 | Canola | nucleus | 51.38 | 48.19 |
| CDX76510 | Canola | nucleus | 51.38 | 48.19 |
| CDY01557 | Canola | nucleus | 50.83 | 48.17 |
| CDY34056 | Canola | nucleus | 50.83 | 47.67 |
| CDX78877 | Canola | nucleus | 51.38 | 47.45 |
| CDX87432 | Canola | nucleus | 49.72 | 47.37 |
| CDY14588 | Canola | nucleus | 49.17 | 46.84 |
| CDY26881 | Canola | nucleus | 49.17 | 46.6 |
| GSMUA_Achr6P08720_001 | Banana | nucleus | 49.17 | 45.18 |
| GSMUA_Achr7P18300_001 | Banana | nucleus | 50.83 | 44.66 |
| TraesCS1B01G235800.1 | Wheat | nucleus | 65.19 | 41.7 |
| Os05t0347400-01 | Rice | nucleus | 65.19 | 41.55 |
| TraesCS1A01G222500.1 | Wheat | nucleus | 65.19 | 41.55 |
| TraesCS1D01G224100.1 | Wheat | nucleus | 65.19 | 41.55 |
| HORVU1Hr1G060250.1 | Barley | nucleus | 65.19 | 41.26 |
| Zm00001d038016_P001 | Maize | extracellular | 65.75 | 39.53 |
| Zm00001d010507_P001 | Maize | nucleus, plastid | 65.19 | 37.34 |
| EES19345 | Sorghum | nucleus, plastid | 65.75 | 36.62 |
Protein Annotations
| EnsemblPlants:CDY59510 | EnsemblPlantsGene:GSBRNA2T00026195001 | InterPro:ALOG_dom | InterPro:IPR006936 | PANTHER:PTHR31165 | PANTHER:PTHR31165:SF6 |
| PFAM:PF04852 | PFscan:PS51697 | ProteinID:CDY59510 | ProteinID:CDY59510.1 | SEG:seg | UniParc:UPI0004EC3EE4 |
| UniProt:A0A078J852 | MapMan:35.1 | : | : | : | : |
Description
BnaCnng35040DBnaCnng35040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J852]
Coordinates
chrLK033771:+:31154..31967
Molecular Weight (calculated)
19564.4 Da
IEP (calculated)
10.111
GRAVY (calculated)
-0.479
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGETAAKAA GSSSSSPSRY ESQKRRDWNT VLQYLKNHKP PLSLSRCSGA HVIEFLKYLD QFGKTKVHVL ACPFFGEPNP PAQCTCPLRQ AWGSLDALIG
101: RLRAAFEEIG GGLPESNPFA AKAVRIYLKE VRETQAKARG IPYDKKKRKR PLTAKATPNV DDGESSGGSG GAALVVSSTM V
101: RLRAAFEEIG GGLPESNPFA AKAVRIYLKE VRETQAKARG IPYDKKKRKR PLTAKATPNV DDGESSGGSG GAALVVSSTM V
001: MEGETAAKAA ASSSSSPSRY ESQKRRDWNT FLQYLRNHKP PLNLSRCSGA HVLEFLKYLD QFGKTKVHAT ACPFFGQPNP PSQCTCPLKQ AWGSLDALIG
101: RLRAAFEEIG GGLPESNPFA AKAVRIYLKE VRQTQAKARG IPYDKKKRKR PHTDTATPIA GDGDDAEGSG GAALVVTAAT TV
101: RLRAAFEEIG GGLPESNPFA AKAVRIYLKE VRQTQAKARG IPYDKKKRKR PHTDTATPIA GDGDDAEGSG GAALVVTAAT TV
Arabidopsis Description
LSH5LSH5 [Source:UniProtKB/TrEMBL;Acc:A0A178U8N9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.