Factsheet for Zm00001d018775_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
plastid 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97956	Sorghum	mitochondrion, nucleus	86.72	78.17
TraesCS2A01G254700.1	Wheat	nucleus	60.55	59.62
HORVU2Hr1G060890.2	Barley	nucleus, plastid	59.77	58.85
TraesCS2B01G267400.1	Wheat	nucleus	58.98	58.75
Os07t0139300-01	Rice	nucleus	63.28	58.7
TraesCS2D01G255200.1	Wheat	nucleus	59.38	58.46
Zm00001d025863_P001	Maize	nucleus	37.89	57.74
Zm00001d003057_P001	Maize	nucleus	39.84	51.0
GSMUA_Achr9P30540_001	Banana	nucleus	36.72	50.81
PGSC0003DMT400054474	Potato	plastid	33.98	49.71
GSMUA_Achr5P00260_001	Banana	nucleus	39.45	49.51
Zm00001d017263_P001	Maize	nucleus	39.45	49.51
GSMUA_Achr4P31900_001	Banana	nucleus	36.33	49.47
Zm00001d043011_P001	Maize	nucleus	40.23	49.28
Zm00001d014032_P001	Maize	nucleus	40.23	49.05
Zm00001d051143_P001	Maize	nucleus	38.67	49.01
Solyc02g069510.1.1	Tomato	nucleus	34.38	48.62
GSMUA_AchrUn_...	Banana	nucleus	39.06	48.08
Zm00001d032696_P001	Maize	nucleus	39.84	47.89
Zm00001d012473_P001	Maize	nucleus	38.67	47.6
GSMUA_Achr11P...	Banana	nucleus	39.84	45.95
Zm00001d015342_P001	Maize	nucleus	42.97	44.53
KRH58368	Soybean	nucleus	39.84	43.22
Zm00001d018433_P001	Maize	nucleus	41.41	42.91
Zm00001d051966_P001	Maize	nucleus	41.02	42.68
KRH42251	Soybean	plastid	39.84	41.3
Zm00001d038442_P001	Maize	nucleus	39.45	40.89
Zm00001d046998_P001	Maize	nucleus	44.14	40.79
Zm00001d036617_P001	Maize	nucleus	43.75	40.43
Zm00001d010596_P001	Maize	nucleus	38.67	40.08
Zm00001d038016_P001	Maize	extracellular	38.67	32.89
Zm00001d010507_P001	Maize	nucleus, plastid	38.28	31.01
Zm00001d036993_P001	Maize	mitochondrion	14.84	21.97
Zm00001d020559_P001	Maize	mitochondrion	7.03	8.78

Protein Annotations

MapMan:35.1	UniProt:A0A1D6HS18	InterPro:ALOG_dom	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009299	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009909
GO:GO:0009987	GO:GO:0048449	GO:GO:0090698	InterPro:IPR006936	ProteinID:ONM51265.1	PFAM:PF04852
PFscan:PS51697	PANTHER:PTHR31165	PANTHER:PTHR31165:SF5	UniParc:UPI000220B47E	EnsemblPlantsGene:Zm00001d018775	EnsemblPlants:Zm00001d018775_P001
EnsemblPlants:Zm00001d018775_T001	SEG:seg	:	:	:	:

Description

G1 protein

Coordinates

chr7:-:4929975..4930745

Molecular Weight (calculated)

27261.5 Da

IEP (calculated)

10.276

GRAVY (calculated)

-0.390

Length

256 amino acids

Sequence
(BLAST)

001: MSTSGARSWS PPPRPSRYES QKRRDWQTFT RYLGAHRPPL ELCRCSGAHV LEFLRYLDRF GKTRVHAPSC AAYGGGGGGR PVEAAVACQC PLRQAWGSLD
101: ALVGRLRAAF EERHGARGIW TSSQQPDGGV GVGVGGGDGA NPFAARAVRL YLRDVRDAQS RARGISYSRK KKKRSKQQDG AAAAGCARPP VTSVTLMPAA
201: ALPHAPPPPC PPPPLPPPYC LTGVPFEFCD YGSVLGGVTA NGAPGFYLPS LFNTFG

Best Arabidopsis Sequence Match ( AT1G07090.1 )
(BLAST)

001: MESADSGRSD PVKGDDPGPS FVSSPPATPS RYESQKRRDW NTFLQYLKNH KPPLALSRCS GAHVIEFLKY LDQFGKTKVH VAACPYFGHQ QPPSPCSCPL
101: KQAWGSLDAL IGRLRAAYEE NGGRPDSNPF AARAVRIYLR EVRESQAKAR GIPYEKKKRK RPPTVTTVRV DVASSRQSDG DPCNVGAPSV AEAVPP

Arabidopsis Description

LSH6LSH6 [Source:UniProtKB/TrEMBL;Acc:A0A178WE41]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.