Factsheet for Os09t0383400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G199500.1	Wheat	mitochondrion	75.1	65.73
TraesCS5D01G206600.1	Wheat	mitochondrion	74.5	65.2
Zm00001d020357_P003	Maize	plastid	74.3	64.46
HORVU5Hr1G059860.2	Barley	cytosol, peroxisome	74.9	62.37
TraesCS5A01G200900.1	Wheat	mitochondrion	74.7	61.69
KXG35557	Sorghum	mitochondrion	73.69	61.58
Solyc05g006130.2.1	Tomato	mitochondrion, plastid	52.61	46.87
VIT_01s0026g00640.t01	Wine grape	plastid	53.82	45.19
GSMUA_Achr8P23590_001	Banana	mitochondrion	53.82	45.04
CDY69637	Canola	mitochondrion, plastid	47.79	43.99
KRG99241	Soybean	plastid	48.39	41.62
CDY61158	Canola	plastid	47.39	41.26
Bra035413.1-P	Field mustard	mitochondrion, plastid	47.39	41.26
AT1G59990.1	Thale cress	plastid	47.59	40.79
CDY64618	Canola	cytosol	9.04	34.35
CDY64619	Canola	cytosol	11.85	30.73
CDY24505	Canola	cytosol	9.04	29.22
Os01t0184500-01	Rice	mitochondrion	21.08	16.8
Os03t0108600-01	Rice	mitochondrion, plastid	21.08	16.38
HORVU2Hr1G060040.2	Barley	plastid	2.81	10.53

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0P0XMK3	ProteinID:BAT07869.1	InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004004	GO:GO:0004386
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0010501	GO:GO:0016787	InterPro:Helicase_ATP-bd	InterPro:Helicase_C
InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014014	EnsemblPlantsGene:Os09g0383400	EnsemblPlants:Os09t0383400-01	InterPro:P-loop_NTPase
PFAM:PF00270	PFAM:PF00271	PFscan:PS51192	PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031
PANTHER:PTHR24031:SF210	InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI0001B6637A
SEG:seg	:	:	:	:	:

Description

RNA helicase 22DEAD-like helicase, N-terminal domain containing protein. (Os09t0383400-01)

Coordinates

chr9:+:13018787..13023093

Molecular Weight (calculated)

54501.9 Da

IEP (calculated)

7.087

GRAVY (calculated)

-0.266

Length

498 amino acids

Sequence
(BLAST)

001: LHHLRHAPLA LRLARLPRLA PSPPPPAARL LLLLAPSQHP APPWRLLSRP RALATAAAEA DDAGAGGNGD GDGFFSEEST SWESLGVSDR LASALHGAGL
101: ARPSLVQAAC IPHVLTTNDV IVAAETGSGK THGYLVPLIE KLCSKSISAE DGNSQDVTSG SPNIALVLCP NVMLCEQVVR MANSLVDESG EPLKSAAAVC
201: GPKGWPTVRP DILVATPAAL LNYLFDYDPE KRRRERFLRN VKFIVFDEAD MLLCGSFENQ VIRLIHMLRF DEKLLSRMED SGKEISLGDT NEYREDSDSQ
301: SAELSADDEE NEDGLVQHRP VNVENAHIGA HKKDWRRVRK VYRRSKQYVF VAATLPQSGK KTAGGVLKRM FPNAVWVSGA YLHRHNPRLE RRWIEVTADT
401: QVSALLDAVK YGLKNEVHDT KLGPNRTMVF TNTVDAANSV SDILQRVGVP CILYHRDSSL EERAKNLQSF RENGGVLVCT DAAARGLDVP NVSHVIQV

Best Arabidopsis Sequence Match ( AT1G59990.1 )
(BLAST)

001: MILSRSVSVL HLCGVSSSAP SKLLSQRFKV SFALAYGSSV SFRLSSLNRS DRKWVRGFAS ATEAEVEKKG NDTFFADHTV SWKSLGLSDN VSIALRDSGF
101: DRPSLTQAVC IPSILSGKDV IVAAETGSGK THGYLAPIID QLTNTALDSE VTNREERPFP LKNISLILCP NVMLCEQVVR MVNGLVDEDG NPLLRVEAVC
201: GSQGWPDRLP DIIVSTPAAL LNNIEPKRNR RLEFLRCVKY VVFDEADMLL CGSFQNQIIR LINMLRFDEK QVSRLAKSNL GRPMEIDASV PQIDLENEDD
301: AEFDEGSISE EEDEEEEEEY LDDIAQMPSV EAEAGSDTKK GWRRVRKIYT RSKQYIFIAA TLPVNGKKTA GGILKHMFQD AVWVSGNFLH RNSPRLKQKW
401: VEVTVDSQVD ALIEAVKNNN NTNTERTMVF ANTVEAVEAV ADILEKASIQ CYRYHKNHKL DERANILADF RETGGVFVCT DAAARGVDVP NVSHVIQADF
501: ASSAVDFLHR IGRTARAGQY GTVTSLYTEA NRDLVEAIRE AVKMGQPVET AFSRKRGFRN KVKKRAFLKA EEAEEPQAVR Y

Arabidopsis Description

RH22DEAD-box ATP-dependent RNA helicase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q944S1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.