Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g085910.2.1 | Tomato | mitochondrion | 93.04 | 93.73 |
| CDY34735 | Canola | nucleus | 41.76 | 60.64 |
| CDY54302 | Canola | cytosol, mitochondrion, nucleus | 32.6 | 60.14 |
| GSMUA_Achr4P06820_001 | Banana | cytosol, mitochondrion, plastid | 49.08 | 57.27 |
| GSMUA_Achr9P21360_001 | Banana | mitochondrion | 46.89 | 57.14 |
| CDX74249 | Canola | nucleus | 53.85 | 56.54 |
| GSMUA_Achr4P13790_001 | Banana | mitochondrion | 47.99 | 56.47 |
| Bra021433.1-P | Field mustard | nucleus | 54.58 | 56.44 |
| CDX91999 | Canola | nucleus | 53.48 | 56.15 |
| VIT_01s0011g03540.t01 | Wine grape | nucleus | 52.01 | 56.13 |
| AT3G02550.1 | Thale cress | nucleus | 52.75 | 54.75 |
| PGSC0003DMT400014630 | Potato | mitochondrion, nucleus, plastid | 48.72 | 54.51 |
| PGSC0003DMT400037711 | Potato | mitochondrion | 46.52 | 50.2 |
| GSMUA_Achr4P03700_001 | Banana | cytosol, mitochondrion, nucleus | 48.35 | 40.49 |
| PGSC0003DMT400064185 | Potato | nucleus | 30.77 | 39.62 |
| PGSC0003DMT400055393 | Potato | nucleus | 26.37 | 35.29 |
| PGSC0003DMT400066165 | Potato | mitochondrion, nucleus | 27.84 | 35.02 |
| Os01t0129600-00 | Rice | cytosol | 32.23 | 25.96 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400032938 | EnsemblPlantsGene:PGSC0003DMG400012653 | EntrezGene:102602683 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004883 | InterPro:LOB | PANTHER:PTHR31304 |
| PANTHER:PTHR31304:SF9 | PFAM:PF03195 | PFscan:PS50891 | PGSC:PGSC0003DMG400012653 | RefSeq:XP_006363116.1 | SEG:seg |
| UniParc:UPI000296AB63 | UniProt:M1AYC3 | MapMan:15.5.24 | : | : | : |
Description
LOB domain-containing protein 41 [Source:PGSC_GENE;Acc:PGSC0003DMG400012653]
Coordinates
chr2:-:41134238..41135334
Molecular Weight (calculated)
29557.1 Da
IEP (calculated)
7.375
GRAVY (calculated)
-0.392
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMSCNGCRV LRKGCSESCS IRPCLQWIKN PDSQSNATVF LAKFYGRAGL MNLINAGPDH LRPAIFRSLL YEACGRIVNP IYGSVGLLWS GNWQLCQNAV
101: EAVLKGTPIT PIASEIAVNN NGPPLKLPYD IRHINKDENS TKSSELHRVR TRCRFKRSGA NTKATKSNPV CSGSGDEFAH EKVNGSTSHE SSLSHQSEEE
201: AAAVAVALNV ECESPEMAEV EDSAKADGEV ELELTLGFSS LGTVEGKPKE TKRNKGVQLV DGAGECKIEL GLH
101: EAVLKGTPIT PIASEIAVNN NGPPLKLPYD IRHINKDENS TKSSELHRVR TRCRFKRSGA NTKATKSNPV CSGSGDEFAH EKVNGSTSHE SSLSHQSEEE
201: AAAVAVALNV ECESPEMAEV EDSAKADGEV ELELTLGFSS LGTVEGKPKE TKRNKGVQLV DGAGECKIEL GLH
001: MRMSCNGCRV LRKGCSEDCS IRPCLAWIKS PEAQANATVF LAKFYGRAGL MNLINAGPNH LRPGIFRSLL HEACGRIVNP IYGSVGLLWS GNWQLCQDAV
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
101: EAVMKGEPVK EIATDAATIG QGPPLKIYDI RHISKDDNSA AAATGSTDLK LAKTRRAKRV STVAIQAESE GKSDEASHDS SLSHQSEIVA AHEGESKESE
201: SNVSEVLAFS PPAVKGSGEI KLDLTLRLEP VSRAYHVVPV KKRRIGVFGT CQKESTCKTE LML
Arabidopsis Description
LBD41LOB domain-containing protein 41 [Source:UniProtKB/Swiss-Prot;Acc:Q9M886]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.