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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 4
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400079319 Potato mitochondrion 95.57 94.97
KRH49799 Soybean cytosol 82.28 81.76
Bra009692.1-P Field mustard cytosol 81.65 81.13
Bra026493.1-P Field mustard cytosol 81.65 81.13
CDX80371 Canola cytosol 81.65 81.13
CDX87168 Canola cytosol 81.65 81.13
CDX88034 Canola cytosol 81.65 81.13
CDY16856 Canola cytosol 81.65 81.13
AT5G23535.1 Thale cress cytosol 81.01 80.5
KRH05093 Soybean cytosol 80.38 79.87
HORVU4Hr1G026060.1 Barley cytosol 75.95 75.47
EES09222 Sorghum cytosol 75.95 75.47
GSMUA_AchrUn_... Banana cytosol 75.32 74.84
EES16542 Sorghum cytosol 74.68 74.21
Os11t0139100-01 Rice cytosol 74.68 74.21
Zm00001d052452_P001 Maize mitochondrion 74.68 74.21
Os12t0135900-00 Rice cytosol 74.05 73.58
TraesCS4A01G186300.1 Wheat cytosol 74.05 73.58
TraesCS4B01G132600.1 Wheat cytosol 74.05 73.58
TraesCS4D01G127400.1 Wheat cytosol 74.05 73.58
KRG99034 Soybean cytosol 59.49 68.12
VIT_07s0151g00660.t01 Wine grape cytosol 82.91 65.5
KRH71399 Soybean mitochondrion 79.75 56.25
GSMUA_Achr6P25160_001 Banana cytosol, plastid 24.05 27.74
PGSC0003DMT400049598 Potato plastid 25.32 21.16
PGSC0003DMT400064380 Potato plastid 24.68 14.94
Protein Annotations
EntrezGene:102590082MapMan:17.7.1.1.22Gene3D:2.30.30.30GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538InterPro:IPR014722
InterPro:KOWUniProt:M1BIY5HAMAP:MF_01326_BPFAM:PF00467PFAM:PF17136EnsemblPlantsGene:PGSC0003DMG400017984
PGSC:PGSC0003DMG400017984EnsemblPlants:PGSC0003DMT400046331PANTHER:PTHR12903PANTHER:PTHR12903:SF6InterPro:Rib_L2_dom2InterPro:Ribosomal_L24
SUPFAM:SSF50104TIGRFAMs:TIGR01079InterPro:Translation_prot_SH3-like_sfUniParc:UPI000296AACDRefSeq:XP_006364809.1:
Description
Ribosomal protein L24 [Source:PGSC_GENE;Acc:PGSC0003DMG400017984]
Coordinates
chr12:-:7468539..7469138
Molecular Weight (calculated)
17524.7 Da
IEP (calculated)
10.862
GRAVY (calculated)
-0.366
Length
158 amino acids
Sequence
(BLAST)
001: MGWKSFQKLI HQWRILRGDV MIIQGKDRGE TGIIKRVILS QNRVIVEGKN LVKKHIKQGQ GHEGGIFTVE APLHVSNVQV VDPVTGKPTK VGIRYLEDCS
101: KVRVSRGIGA SGSIIPRPEI LKIRTTPRPT VAGPKDTPME VVMERTYDPK TGKGMPDL
Best Arabidopsis Sequence Match ( AT5G23535.2 )
(BLAST)
001: MGWKAAEKLI RHWKILRGDN VMIIRGKDKG ETGTIKRVIR SQNRVIVEGK NLIKKHIKGG PDHEGGIFTV EAPLHASNVQ VVDPVTGRPC KVGVKYLEDG
101: TKVRVARGTG TSGSIIPRPE ILKIRATPRP TTAGPKDTPM EFVWEQTYDA KTGKGMPDL
Arabidopsis Description
50S ribosomal protein L24 [Source:UniProtKB/TrEMBL;Acc:Q9LT09]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.