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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g075850.2.1 Tomato mitochondrion 100.0 100.0
PGSC0003DMT400046331 Potato cytosol 94.97 95.57
KRH49799 Soybean cytosol 83.02 83.02
Bra009692.1-P Field mustard cytosol 82.39 82.39
Bra026493.1-P Field mustard cytosol 82.39 82.39
CDX80371 Canola cytosol 82.39 82.39
CDX87168 Canola cytosol 82.39 82.39
CDX88034 Canola cytosol 82.39 82.39
CDY16856 Canola cytosol 82.39 82.39
AT5G23535.1 Thale cress cytosol 81.76 81.76
KRH05093 Soybean cytosol 81.13 81.13
HORVU4Hr1G026060.1 Barley cytosol 76.73 76.73
EES09222 Sorghum cytosol 76.73 76.73
GSMUA_AchrUn_... Banana cytosol 75.47 75.47
Os11t0139100-01 Rice cytosol 75.47 75.47
EES16542 Sorghum cytosol 75.47 75.47
Zm00001d052452_P001 Maize mitochondrion 75.47 75.47
Os12t0135900-00 Rice cytosol 74.84 74.84
TraesCS4A01G186300.1 Wheat cytosol 74.84 74.84
TraesCS4B01G132600.1 Wheat cytosol 74.84 74.84
TraesCS4D01G127400.1 Wheat cytosol 74.84 74.84
KRG99034 Soybean cytosol 59.75 68.84
VIT_07s0151g00660.t01 Wine grape cytosol 84.28 67.0
KRH71399 Soybean mitochondrion 79.87 56.7
GSMUA_Achr6P25160_001 Banana cytosol, plastid 24.53 28.47
PGSC0003DMT400049598 Potato plastid 24.53 20.63
PGSC0003DMT400064380 Potato plastid 23.9 14.56
Protein Annotations
EntrezGene:102580372MapMan:17.7.1.1.22Gene3D:2.30.30.30GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538GO:GO:0030529
InterPro:IPR014722InterPro:KOWUniProt:M1D1L9HAMAP:MF_01326_BPFAM:PF00467PFAM:PF17136
EnsemblPlantsGene:PGSC0003DMG400030873PGSC:PGSC0003DMG400030873EnsemblPlants:PGSC0003DMT400079319ScanProsite:PS01108PANTHER:PTHR12903PANTHER:PTHR12903:SF6
InterPro:Rib_L2_dom2InterPro:Ribosomal_L24InterPro:Ribosomal_L24/26_CSSMART:SM00739SUPFAM:SSF50104TIGRFAMs:TIGR01079
InterPro:Translation_prot_SH3-like_sfUniParc:UPI000276BAC2RefSeq:XP_006364466.1RefSeq:XP_006364467.1::
Description
Ribosomal protein L24 [Source:PGSC_GENE;Acc:PGSC0003DMG400030873]
Coordinates
chr8:-:48174809..48178214
Molecular Weight (calculated)
17637.7 Da
IEP (calculated)
11.073
GRAVY (calculated)
-0.494
Length
159 amino acids
Sequence
(BLAST)
001: MGWKSYQKLI HQWRILRGDN VMIIRGKDRG ETGVVKRVVR SQNRVIVEGK NLVKKHIKQG QGHEGGIFTV EAPLHVSNVQ VVDPVTGKPT KVGIRYLEDG
101: SKVRVSRGIG ASGSIIPRPE ILKIRTTPRP TVAGPKDTPM EVVMERTYDP KTGKGMPDL
Best Arabidopsis Sequence Match ( AT5G23535.2 )
(BLAST)
001: MGWKAAEKLI RHWKILRGDN VMIIRGKDKG ETGTIKRVIR SQNRVIVEGK NLIKKHIKGG PDHEGGIFTV EAPLHASNVQ VVDPVTGRPC KVGVKYLEDG
101: TKVRVARGTG TSGSIIPRPE ILKIRATPRP TTAGPKDTPM EFVWEQTYDA KTGKGMPDL
Arabidopsis Description
50S ribosomal protein L24 [Source:UniProtKB/TrEMBL;Acc:Q9LT09]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.