Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g066310.2.1 | Tomato | plastid | 96.38 | 96.38 |
| GSMUA_Achr9P30450_001 | Banana | mitochondrion | 73.19 | 76.52 |
| Zm00001d049387_P001 | Maize | plastid | 64.49 | 69.53 |
| PGSC0003DMT400005956 | Potato | plastid | 58.7 | 67.5 |
| EES13497 | Sorghum | plastid | 63.77 | 66.67 |
| TraesCS6A01G358100.1 | Wheat | plastid | 59.42 | 64.57 |
| EER95861 | Sorghum | plastid | 63.77 | 64.23 |
| TraesCS6B01G390600.1 | Wheat | plastid | 58.7 | 63.78 |
| TraesCS6D01G340700.1 | Wheat | plastid | 58.7 | 63.78 |
| Os07t0147550-00 | Rice | plastid | 60.87 | 60.43 |
| TraesCS6A01G374400.2 | Wheat | plastid | 60.87 | 60.43 |
| TraesCS6B01G412100.1 | Wheat | plastid | 59.42 | 58.57 |
| TraesCS6D01G358900.1 | Wheat | plastid | 58.7 | 57.86 |
| Os07t0147500-01 | Rice | plastid | 56.52 | 56.93 |
| HORVU2Hr1G038940.4 | Barley | plastid | 58.7 | 54.73 |
| HORVU2Hr1G038960.1 | Barley | plastid | 55.07 | 45.78 |
| TraesCS2D01G253900.2 | Wheat | plastid | 56.52 | 45.09 |
| TraesCS2A01G253100.2 | Wheat | plastid | 51.45 | 43.83 |
| HORVU6Hr1G085170.3 | Barley | plastid | 37.68 | 37.14 |
| TraesCS2B01G272900.1 | Wheat | plastid | 34.78 | 18.39 |
Protein Annotations
| MapMan:1.1.1.2.9 | UniProt:A0A0C4B0N5 | ProteinID:AFW90561 | ProteinID:AFW90561.1 | ProteinID:AFW90606 | ProteinID:AFW90606.1 |
| ProteinID:AFX66996 | ProteinID:AFX66996.1 | ProteinID:CAA27989 | ProteinID:CAA27989.1 | ProteinID:CAA28450 | ProteinID:CAA28450.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009523 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009987 | GO:GO:0010270 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0042651 | EMBL:JX576205 |
| EMBL:JX576250 | EMBL:JX683432 | PFAM:PF04725 | EnsemblPlantsGene:PGSC0003DMG400022241 | PGSC:PGSC0003DMG400022241 | EnsemblPlants:PGSC0003DMT400057257 |
| InterPro:PSII_PsbR | PANTHER:PTHR34369 | PANTHER:PTHR34369:SF2 | TMHMM:TMhelix | UniParc:UPI000016DFB7 | EMBL:X04401 |
| EMBL:X04753 | SEG:seg | : | : | : | : |
Description
Photosystem II 10 kDa polypeptide, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400022241]
Coordinates
chr7:+:56364098..56365820
Molecular Weight (calculated)
14400.3 Da
IEP (calculated)
9.980
GRAVY (calculated)
-0.030
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTVMSSLS LKPTFTLEKT SVKGLPSLAR SSSPFKVVAS GVKKLKTDKP YGINGSMALR DGLDASGRKP KGKGVYQYVD KYGANVDGYS PIYNTDEWSP
101: SGDVYVGGTT GLAIWAVTLV GILAGGALLV YNTSALAQ
101: SGDVYVGGTT GLAIWAVTLV GILAGGALLV YNTSALAQ
001: MAASVMLSSV TLKPAGFTVE KTAARGLPSL TRARPSFKIV ASGVKKIKTD KPFGINGSMD LRDGVDASGR KGKGYGVYKY VDKYGANVDG YSPIYNENEW
101: SASGDVYKGG VTGLAIWAVT LAGILAGGAL LVYNTSALAQ
101: SASGDVYKGG VTGLAIWAVT LAGILAGGAL LVYNTSALAQ
Arabidopsis Description
PSBRPSBR [Source:UniProtKB/TrEMBL;Acc:A0A178WET2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.