Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 3
- extracellular 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063370 | Potato | nucleus | 99.3 | 13.52 |
| PGSC0003DMT400056692 | Potato | nucleus | 15.38 | 1.93 |
| PGSC0003DMT400018531 | Potato | nucleus | 11.19 | 1.25 |
| PGSC0003DMT400000297 | Potato | nucleus | 4.9 | 0.52 |
| PGSC0003DMT400005723 | Potato | nucleus | 2.8 | 0.49 |
| PGSC0003DMT400055091 | Potato | mitochondrion | 2.8 | 0.34 |
| PGSC0003DMT400039875 | Potato | nucleus | 2.1 | 0.33 |
| PGSC0003DMT400009842 | Potato | mitochondrion | 0.0 | 0.0 |
| PGSC0003DMT400023284 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400038620 | Potato | cytosol, nucleus, plastid | 0.0 | 0.0 |
| PGSC0003DMT400041647 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400041805 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400046188 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400055058 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400060759 | Potato | nucleus | 0.0 | 0.0 |
| PGSC0003DMT400084916 | Potato | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400063366 | EnsemblPlantsGene:PGSC0003DMG401024649 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | InterPro:IPR002483 | InterPro:PWI_dom | PFAM:PF01480 | PGSC:PGSC0003DMG401024649 | UniParc:UPI00029666D6 |
| UniProt:M1CAJ7 | MapMan:35.1 | : | : | : | : |
Description
EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase [Source:PGSC_GENE;Acc:PGSC0003DMG401024649]
Coordinates
chr3:-:55279182..55279793
Molecular Weight (calculated)
16276.0 Da
IEP (calculated)
4.660
GRAVY (calculated)
-0.790
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSELRMWVS DRLMSLLGYS QSTVVSYVLN LAKKASSAAN LTNQLVDDMG MSSSSETRVF AQEIFERVER KTTGPNLYLQ QEREAAMLAR KQKTYSLLEA
101: DDEDENIVGV ESNSVPSQTR KEDTRTKKFR KRVETHEDED DEA
101: DDEDENIVGV ESNSVPSQTR KEDTRTKKFR KRVETHEDED DEA
0001: MGSNDLNTWV SDKLMVLLGF SQTAVVQYLI AMAKQSKSPG ELVRELVECG FSLSGDTRAF AEEIYARAPR KTPGVNLYQQ QEAEAAMLLK KQKTFSLLEA
0101: DHDEDENNVK KQSASKTGKS DKGQKRFRKK SEQLEDDDDE VVIVREDKRN VRRKVSEDED DGTESEEERL RDQREREELE QHLRERDTAR TRKLTEPKMS
0201: KKEQEEFVRR DSAVDKGDIE SLRKFSWQEY MKKRKQKKVL ELKDDIEDEP YLFGDEKLTE REIREFRYKR EIYELIKKST QEEDNVGEYR MPDAYDQQGS
0301: VDQEKRFAVS VQRYRDMGSA EKMNPFAEQE AWEDHQIENA ALKFGAKNKE VSDNYEFVFE DQIDFIKASV LAGDNYEDEM HAKPSQDSAG KSAFHMLQED
0401: RKALPIYTYR DQLLNAVKDH QVLIIVGETG SGKTTQIPQY LHEAGYTKLG KVGCTQPRRV AAMSVAARVA QEMGGKLGHE VGYSIRFEDC TSEKTILKYM
0501: TDGMLLRELL GEPDLGSYSV IIVDEAHERT LRTDILFGLV KDIARARPDL KLLISSATMD AEKFSDFFDQ APIFRFPGRR YPVDICFTTA PEADYMDAAI
0601: TTVLTIHVKE PLGDVLVFLP GQEEIEAVEE NLKHKIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLVTPISK ASATQRTGRA GRTSPGKCYR LYTAFNYYND LEDNTVPEIQ RTNLASVVLS LKSLGIHNLL NFDFMDPPPS EALIKSLELL
0801: FALGALNQLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGPSIFYR PKDKQVHADN AMKNFHVGNV GDHIAFLKIY NSWKETNYST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDVSSNANE LDSIRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPAS GLSQVLPRWV VYHQLVLTSK
1001: EYMRQVTELK PEWLIEIAPH YYQLKDVEDA TSKKMPKTSG RAVV
0101: DHDEDENNVK KQSASKTGKS DKGQKRFRKK SEQLEDDDDE VVIVREDKRN VRRKVSEDED DGTESEEERL RDQREREELE QHLRERDTAR TRKLTEPKMS
0201: KKEQEEFVRR DSAVDKGDIE SLRKFSWQEY MKKRKQKKVL ELKDDIEDEP YLFGDEKLTE REIREFRYKR EIYELIKKST QEEDNVGEYR MPDAYDQQGS
0301: VDQEKRFAVS VQRYRDMGSA EKMNPFAEQE AWEDHQIENA ALKFGAKNKE VSDNYEFVFE DQIDFIKASV LAGDNYEDEM HAKPSQDSAG KSAFHMLQED
0401: RKALPIYTYR DQLLNAVKDH QVLIIVGETG SGKTTQIPQY LHEAGYTKLG KVGCTQPRRV AAMSVAARVA QEMGGKLGHE VGYSIRFEDC TSEKTILKYM
0501: TDGMLLRELL GEPDLGSYSV IIVDEAHERT LRTDILFGLV KDIARARPDL KLLISSATMD AEKFSDFFDQ APIFRFPGRR YPVDICFTTA PEADYMDAAI
0601: TTVLTIHVKE PLGDVLVFLP GQEEIEAVEE NLKHKIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLVTPISK ASATQRTGRA GRTSPGKCYR LYTAFNYYND LEDNTVPEIQ RTNLASVVLS LKSLGIHNLL NFDFMDPPPS EALIKSLELL
0801: FALGALNQLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGPSIFYR PKDKQVHADN AMKNFHVGNV GDHIAFLKIY NSWKETNYST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDVSSNANE LDSIRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPAS GLSQVLPRWV VYHQLVLTSK
1001: EYMRQVTELK PEWLIEIAPH YYQLKDVEDA TSKKMPKTSG RAVV
Arabidopsis Description
MEE29Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 [Source:UniProtKB/Swiss-Prot;Acc:F4IJV4]
SUBAcon: [endoplasmic reticulum,nucleus]
SUBAcon: [endoplasmic reticulum,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.