Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400063366 | Potato | plastid | 13.52 | 99.3 |
| Solyc03g115390.2.1 | Tomato | nucleus | 85.9 | 99.23 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 30.48 | 87.19 |
| KRH54662 | Soybean | nucleus | 82.29 | 82.6 |
| VIT_17s0000g06950.t01 | Wine grape | nucleus | 82.38 | 82.07 |
| GSMUA_Achr4P23370_001 | Banana | nucleus | 56.95 | 79.73 |
| KRH69386 | Soybean | cytosol | 19.9 | 79.47 |
| KRH40933 | Soybean | cytosol | 46.0 | 79.31 |
| PGSC0003DMT400005723 | Potato | nucleus | 61.62 | 78.71 |
| Zm00001d049980_P001 | Maize | plasma membrane | 51.52 | 77.51 |
| KRH12910 | Soybean | cytosol, nucleus | 54.0 | 76.11 |
| KRH74752 | Soybean | nucleus | 72.57 | 73.84 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 72.95 | 73.23 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 72.86 | 73.14 |
| KXG30390 | Sorghum | nucleus | 72.48 | 72.75 |
| EES02741 | Sorghum | nucleus | 72.19 | 72.47 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 70.19 | 68.24 |
| PGSC0003DMT400038620 | Potato | cytosol, nucleus, plastid | 18.1 | 54.44 |
| PGSC0003DMT400023284 | Potato | nucleus | 33.81 | 49.1 |
| PGSC0003DMT400084916 | Potato | nucleus | 36.19 | 47.44 |
| PGSC0003DMT400046188 | Potato | nucleus | 30.29 | 46.09 |
| PGSC0003DMT400009842 | Potato | mitochondrion | 15.52 | 43.24 |
| PGSC0003DMT400039875 | Potato | nucleus | 33.24 | 37.81 |
| PGSC0003DMT400056692 | Potato | nucleus | 40.86 | 37.6 |
| PGSC0003DMT400018531 | Potato | nucleus | 37.05 | 30.27 |
| PGSC0003DMT400055058 | Potato | nucleus | 22.19 | 27.28 |
| PGSC0003DMT400055091 | Potato | mitochondrion | 23.71 | 21.39 |
| PGSC0003DMT400000297 | Potato | nucleus | 26.19 | 20.58 |
| PGSC0003DMT400041805 | Potato | nucleus | 22.86 | 14.8 |
| PGSC0003DMT400060759 | Potato | nucleus | 22.76 | 13.82 |
| PGSC0003DMT400041647 | Potato | cytosol | 0.19 | 0.54 |
Protein Annotations
| Gene3D:1.20.120.1080 | EntrezGene:102599135 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DNA/RNA_helicase_DEAH_CS |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | UniProt:M1CAK1 | InterPro:P-loop_NTPase | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| EnsemblPlantsGene:PGSC0003DMG402024649 | PGSC:PGSC0003DMG402024649 | EnsemblPlants:PGSC0003DMT400063370 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 |
| UniParc:UPI000294C776 | RefSeq:XP_006345152.1 | RefSeq:XP_006345153.1 | SEG:seg | : | : |
Description
EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase [Source:PGSC_GENE;Acc:PGSC0003DMG402024649]
Coordinates
chr3:-:55261783..55281426
Molecular Weight (calculated)
119964.0 Da
IEP (calculated)
5.181
GRAVY (calculated)
-0.626
Length
1050 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSELRMWVS DRLMSLLGYS QSTVVSYVLN LAKKASSAAN LTNQLVDDMG MSSSSETRVF AQEIFERVER KTTGPNLYLQ QEREAAMLAR KQKTYSLLEA
0101: DDEDENIVGV ESNSVPSQTR KEDTRTKKFR KRVETHEDED DEVVRDEEDD RRVRRRTSQD QDDSDNSESE EEILRDQRER EELERHIRER DAAGTRKLAE
0201: PKLTRREEEE AIRRADALEQ DDIGSLRKVS RREYLKKREQ KKLEELRDDL EDEQYLFEGV KLTEAEEREL RYKKEIYELV KKRSEDTGDM DEYRIPDAYD
0301: LEGGVNQEKR FSVASQRYRD PDAAEKMNPF AEQEAWEEHQ IGKANLKFGS KDRKSRSDDY QFVFEDQIEF IKAAVMDGVN VDQEPSIDSI EKTMAKSAFE
0401: KLQEDRKTLP MYPYRDDLLQ AINDHQVLVI VGETGSGKTT QIPQYLHEAG YTKRGKIGCT QPRRVAAMSV AARVSQEMGV KLGHEVGYSI RFEDCTSEKT
0501: ILKYMTDGML LREFLGEPDL ASYSVIMVDE AHERTLSTDI LFGLVKDISR FRPDLKLLIS SATLDAEKFS DYFDCAPIFK IPGRRFPVEI HYTKAPEADY
0601: LDAAVVTALQ IHVTQPPGDG DILIFLTGQE EIETAEEIIK HRIKGLGTKI AELIICPIYA NLPTELQAKI FEPTPEGARK VVLATNIAET SLTIDGIKYV
0701: IDPGFSKMKS YNPRTGMESL LVAPISKASA NQRAGRSGRT GPGKCFRLYT AYNYMNDLED NTVPEIQRTN LANVVLSLKS LGIHDLLNFD FMDPPPAEAL
0801: LKALELLFAL SALNKLGELT KVGRRMAEFP LDPMLSKMIV ASDKYKCSDE IISIAAMLSV GNSIFYRPKD KQVHADNARM NFHVGNVGDH IALLKVYSSW
0901: RETDFSTQWC YENYIQVRSM KRARDIRDQL EGLLERVEIE LTSNDNDYEA IKKAITSGFF PHSAKLQKNG SYRTIKHPQT VNVHPSSGLA QVLPRWVVYH
1001: ELVLTTKEYM RQVTELKPDW LVEIAPHYYQ LKDVEDSSSK KMPRGTGRAS
0101: DDEDENIVGV ESNSVPSQTR KEDTRTKKFR KRVETHEDED DEVVRDEEDD RRVRRRTSQD QDDSDNSESE EEILRDQRER EELERHIRER DAAGTRKLAE
0201: PKLTRREEEE AIRRADALEQ DDIGSLRKVS RREYLKKREQ KKLEELRDDL EDEQYLFEGV KLTEAEEREL RYKKEIYELV KKRSEDTGDM DEYRIPDAYD
0301: LEGGVNQEKR FSVASQRYRD PDAAEKMNPF AEQEAWEEHQ IGKANLKFGS KDRKSRSDDY QFVFEDQIEF IKAAVMDGVN VDQEPSIDSI EKTMAKSAFE
0401: KLQEDRKTLP MYPYRDDLLQ AINDHQVLVI VGETGSGKTT QIPQYLHEAG YTKRGKIGCT QPRRVAAMSV AARVSQEMGV KLGHEVGYSI RFEDCTSEKT
0501: ILKYMTDGML LREFLGEPDL ASYSVIMVDE AHERTLSTDI LFGLVKDISR FRPDLKLLIS SATLDAEKFS DYFDCAPIFK IPGRRFPVEI HYTKAPEADY
0601: LDAAVVTALQ IHVTQPPGDG DILIFLTGQE EIETAEEIIK HRIKGLGTKI AELIICPIYA NLPTELQAKI FEPTPEGARK VVLATNIAET SLTIDGIKYV
0701: IDPGFSKMKS YNPRTGMESL LVAPISKASA NQRAGRSGRT GPGKCFRLYT AYNYMNDLED NTVPEIQRTN LANVVLSLKS LGIHDLLNFD FMDPPPAEAL
0801: LKALELLFAL SALNKLGELT KVGRRMAEFP LDPMLSKMIV ASDKYKCSDE IISIAAMLSV GNSIFYRPKD KQVHADNARM NFHVGNVGDH IALLKVYSSW
0901: RETDFSTQWC YENYIQVRSM KRARDIRDQL EGLLERVEIE LTSNDNDYEA IKKAITSGFF PHSAKLQKNG SYRTIKHPQT VNVHPSSGLA QVLPRWVVYH
1001: ELVLTTKEYM RQVTELKPDW LVEIAPHYYQ LKDVEDSSSK KMPRGTGRAS
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.