Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G374800.1 | Wheat | nucleus | 91.39 | 94.36 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 91.02 | 93.98 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 31.39 | 92.37 |
| Zm00001d049980_P001 | Maize | plasma membrane | 57.87 | 89.54 |
| KXG30390 | Sorghum | nucleus | 82.13 | 84.8 |
| EES02741 | Sorghum | nucleus | 81.76 | 84.42 |
| Bra040328.1-P | Field mustard | cytosol, mitochondrion | 15.56 | 78.5 |
| GSMUA_Achr4P23370_001 | Banana | nucleus | 52.78 | 76.0 |
| Solyc03g115390.2.1 | Tomato | nucleus | 62.31 | 74.04 |
| KRH54662 | Soybean | nucleus | 70.0 | 72.28 |
| VIT_17s0000g06950.t01 | Wine grape | nucleus | 70.28 | 72.01 |
| KRH40933 | Soybean | cytosol | 39.91 | 70.77 |
| KRH12910 | Soybean | cytosol, nucleus | 48.52 | 70.34 |
| PGSC0003DMT400063370 | Potato | nucleus | 68.24 | 70.19 |
| CDY37024 | Canola | cytosol, mitochondrion | 20.65 | 68.83 |
| AT1G32490.1 | Thale cress | cytosol | 65.74 | 68.01 |
| PGSC0003DMT400005723 | Potato | nucleus | 51.3 | 67.4 |
| Bra010168.1-P | Field mustard | nucleus | 64.91 | 67.15 |
| CDY26898 | Canola | nucleus | 64.81 | 67.05 |
| CDY32278 | Canola | endoplasmic reticulum | 64.54 | 66.76 |
| KRH74752 | Soybean | nucleus | 63.7 | 66.67 |
| KRH69386 | Soybean | cytosol | 15.93 | 65.4 |
| AT2G35340.1 | Thale cress | endoplasmic reticulum, nucleus | 63.06 | 65.23 |
| HORVU1Hr1G056370.1 | Barley | nucleus | 63.06 | 64.06 |
| HORVU1Hr1G056400.1 | Barley | nucleus | 63.06 | 63.94 |
| Solyc12g017700.1.1 | Tomato | nucleus | 51.02 | 62.19 |
| AT4G16680.2 | Thale cress | nucleus | 45.19 | 61.31 |
| CDY60185 | Canola | nucleus | 46.2 | 58.09 |
| CDY40514 | Canola | nucleus | 46.11 | 57.84 |
| Bra038498.1-P | Field mustard | nucleus | 47.69 | 57.16 |
| HORVU4Hr1G052730.3 | Barley | cytosol | 31.3 | 46.88 |
| HORVU3Hr1G028550.17 | Barley | cytosol | 26.3 | 40.75 |
| HORVU7Hr1G032080.3 | Barley | plastid | 29.91 | 39.44 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 39.72 | 34.54 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 35.09 | 30.01 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 22.78 | 26.03 |
| HORVU5Hr1G094990.5 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 21.39 | 20.09 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 23.24 | 19.5 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 21.94 | 19.01 |
| HORVU3Hr1G074660.7 | Barley | plastid | 19.26 | 16.33 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 22.04 | 13.93 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 21.76 | 12.88 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | UniProt:A0A287Q1F9 | ncoils:Coil | InterPro:DNA/RNA_helicase_DEAH_CS |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU4Hr1G088270 | EnsemblPlants:HORVU4Hr1G088270.17 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00271 | PFAM:PF04408 |
| PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI000B4635F3 | SEG:seg |
Description
No Description!
Coordinates
chrchr4H:+:640198228..640207965
Molecular Weight (calculated)
122584.0 Da
IEP (calculated)
6.065
GRAVY (calculated)
-0.636
Length
1080 amino acids
Sequence
(BLAST)
(BLAST)
0001: RRRPRPPHLS GRRNPPPLLP DVQTIQAGRR RTPSAPGASA YPTVTSSASA PTSTPNPSAV MASDKQLRDW VSDKLMSIQG FSTSVLVHYV IGLAKDCSSA
0101: GDLVGKLVDY GFSSSAETTS FAADIYAKVP RKGKSISNYQ KQERDAAKLV KKQSTYKLLA DEDDDEIDNH TTSSASASSK SRKHFRRKTQ DQDDGKDDDE
0201: TAAHISERSV RRRTEEVDDE DGNDTLDEEQ EILRDQQERA QLEKNMRERD AVHTRKLMER QLSKEEQEEL TRRSQALEKN DTSDLRDFSR QAYLQKRRDK
0301: KIDEIRDEIL DHEYLFQDVT LTEAEKNDFR YKKKIFDLVK QHVESADDVA EYKMPEAYDM GEGVNQEKRF SVAMQRYKDP EAKDKMNPFA EQEAWEEHQI
0401: GKSKLEFGSK DRKRSSNEYQ YVFDDQIDFV KSSVIEGTQF EDDSDQETID AKDILKRELQ DERKTLPIYK FRDDLLKAVD EYQVIVIVGE TGSGKTTQIP
0501: QYLHEAGYTA RGKVACTQPR RVAAMSVAAR VSQEMGVKLG HEVCVGYSIR FEDCTSEKTM IKYMTDGMLL REFLGEPDLA GYSVVMVDEA HERTLSTDIL
0601: FGLVKDIARF RPDLKLLISS ATLDAEKFSD YFDSAPIFKI PGRRYPVEVH YTKAPEADYI DAAIVTILQI HVTQPPGDIL VFLTGQEEIE TVDEILKHKT
0701: RGLGTKIPEL NICPIYANLP TELQAKIFET TPEGSRKVVL ATNIAETSLT IDGIKYVIDP GFCKIKSYNP RTGMESLLIN PISKASANQR AGRSGRTGPG
0801: KCFRLYTSYN YMHDLEDNTV PEIQRTNLAN VVLTLKSLGI HDLVNFDFMD PPPSEALLKA LEQLFALSAL NSRGELTKTG RRMAEFPLDP MLSKMIVASE
0901: KYKCSDEVMS IASMLSIGNS IFYRPKDKQV HADNARLNFH TGNVGDHIAL LNVYNSWRET DFSTQWCYEN YIQVRSMKRA RDIRDQLEGL MERVEIEVCS
1001: NASDLDAIKK AITSGFFHHS ARLQKNGSYR TVKNPQTVFI HPSSGLAQLL PRWVIYHELV LTTKEYMRQV CTDSPELSKS
0101: GDLVGKLVDY GFSSSAETTS FAADIYAKVP RKGKSISNYQ KQERDAAKLV KKQSTYKLLA DEDDDEIDNH TTSSASASSK SRKHFRRKTQ DQDDGKDDDE
0201: TAAHISERSV RRRTEEVDDE DGNDTLDEEQ EILRDQQERA QLEKNMRERD AVHTRKLMER QLSKEEQEEL TRRSQALEKN DTSDLRDFSR QAYLQKRRDK
0301: KIDEIRDEIL DHEYLFQDVT LTEAEKNDFR YKKKIFDLVK QHVESADDVA EYKMPEAYDM GEGVNQEKRF SVAMQRYKDP EAKDKMNPFA EQEAWEEHQI
0401: GKSKLEFGSK DRKRSSNEYQ YVFDDQIDFV KSSVIEGTQF EDDSDQETID AKDILKRELQ DERKTLPIYK FRDDLLKAVD EYQVIVIVGE TGSGKTTQIP
0501: QYLHEAGYTA RGKVACTQPR RVAAMSVAAR VSQEMGVKLG HEVCVGYSIR FEDCTSEKTM IKYMTDGMLL REFLGEPDLA GYSVVMVDEA HERTLSTDIL
0601: FGLVKDIARF RPDLKLLISS ATLDAEKFSD YFDSAPIFKI PGRRYPVEVH YTKAPEADYI DAAIVTILQI HVTQPPGDIL VFLTGQEEIE TVDEILKHKT
0701: RGLGTKIPEL NICPIYANLP TELQAKIFET TPEGSRKVVL ATNIAETSLT IDGIKYVIDP GFCKIKSYNP RTGMESLLIN PISKASANQR AGRSGRTGPG
0801: KCFRLYTSYN YMHDLEDNTV PEIQRTNLAN VVLTLKSLGI HDLVNFDFMD PPPSEALLKA LEQLFALSAL NSRGELTKTG RRMAEFPLDP MLSKMIVASE
0901: KYKCSDEVMS IASMLSIGNS IFYRPKDKQV HADNARLNFH TGNVGDHIAL LNVYNSWRET DFSTQWCYEN YIQVRSMKRA RDIRDQLEGL MERVEIEVCS
1001: NASDLDAIKK AITSGFFHHS ARLQKNGSYR TVKNPQTVFI HPSSGLAQLL PRWVIYHELV LTTKEYMRQV CTDSPELSKS
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.