Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G056400.1 | Barley | nucleus | 100.0 | 99.81 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 92.19 | 92.37 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 92.1 | 92.36 |
| TraesCS1A01G243400.1 | Wheat | nucleus | 92.0 | 92.26 |
| Os05t0389800-01 | Rice | nucleus | 74.22 | 73.74 |
| OQU77934 | Sorghum | nucleus | 72.34 | 72.14 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 64.06 | 63.06 |
| HORVU4Hr1G052730.3 | Barley | cytosol | 32.83 | 48.41 |
| HORVU3Hr1G028550.17 | Barley | cytosol | 28.13 | 42.9 |
| HORVU7Hr1G032080.3 | Barley | plastid | 31.42 | 40.78 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 41.11 | 35.19 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 35.18 | 29.61 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 23.61 | 26.56 |
| HORVU5Hr1G094990.5 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 22.3 | 20.61 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 24.27 | 20.05 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 22.2 | 18.93 |
| HORVU3Hr1G074660.7 | Barley | plastid | 19.47 | 16.25 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 22.39 | 13.93 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 22.3 | 12.99 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G056370 | EnsemblPlants:HORVU1Hr1G056370.1 | InterPro:Helicase-assoc_dom |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | UniProt:M0UEC3 | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 |
| SUPFAM:SSF52540 | UniParc:UPI00029681F8 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:+:413750846..413754276
Molecular Weight (calculated)
118632.0 Da
IEP (calculated)
5.715
GRAVY (calculated)
-0.510
Length
1063 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASEERQLKT RVSDRLMALV GYSEVMVVRL VLRLARESAS AADLAARLVD LAGLPSSADT VAFAEDVHAM FPRKGSRVSE YRKQVQEAAA FAKKQSAFKL
0101: LDDEDDHAQD AGAIATATAS SSNTSGKKRF RQNAASPGDD DEEEEGTVMR DSGRKVRAQR APAEDGDGSD GEELEEMDRD QIEKAQLDRH IRERDAASTR
0201: KLTDRKPTKR EQGELGRRSE ALDRGDTSEL RTASRQAYLE KRKKMKVEEM QDEIIDNEFI FDGVKMTNAE EMELRRKKEI YDLVKVSVGK DADADAGDYY
0301: RMPDAYDAAA NVDQAKRFAV QRQRYDDPEA AARDGKRSNF FSEQEAWEEQ QIRKSRLHFG SDDGGRAGGG YELVLEGVVD FVKSTVQAGA EPDGEMDELA
0401: EAIDAKVTLQ RELQDERKNL PVYKFKDDLL KAIDKYQVLI IVGETGSGKT TQIPQYLHEA GYTAKGKKIA CTQPRRVAAM SVAARVAQEM GVKLGHEVGY
0501: SIRFEDCTSD KTVIKYMTDG MLLREFLGEP DLASYSVVMV DEAHERTLST DILFGLVKDI ARFRPDVKLL ISSATLNAEK FSDFFDEAPI FKIPGRRYKV
0601: DIHYTTAPEA DYIAAAVVTV LQLHVTQPAG DILLFLTGQE EIETVEEMLK QKMRTFGGKM AELVICPIYA NLPTELQAKI FEPTPEGSRK VVVATNIAET
0701: SLTIDGIKYV IDPGFCKLKS YNPRTGMESL RVEPISKASA DQRAGRSGRT GPGKCFRLFT EYNFRNDLDD DTVPEIQRSN LANVVLRLKA LGINDLVSFD
0801: FMDPPASEAL LKALEELFAL GALNSRGELT KTGRRMAEFP LDPMLSKAIV ASEKYKCSEE VVTIAAMLSA GNAVFYRPKD KLVHADTARQ AFHAGNVGDH
0901: VALLNVYNAW KESGYSSQWC RENFVQPRTM KRARDVRDQL EALLERVEIE HCSGVGDLGA ITKAVTAGYF RNAARRQKDG SYRAVKSRQT VFVHPSSGMA
1001: EVTPSWVVYH ELVLTTKEYM RQVTELKPEW LLEIAPHYYQ RRDIDGHEPK KMAKGKGPAP APL
0101: LDDEDDHAQD AGAIATATAS SSNTSGKKRF RQNAASPGDD DEEEEGTVMR DSGRKVRAQR APAEDGDGSD GEELEEMDRD QIEKAQLDRH IRERDAASTR
0201: KLTDRKPTKR EQGELGRRSE ALDRGDTSEL RTASRQAYLE KRKKMKVEEM QDEIIDNEFI FDGVKMTNAE EMELRRKKEI YDLVKVSVGK DADADAGDYY
0301: RMPDAYDAAA NVDQAKRFAV QRQRYDDPEA AARDGKRSNF FSEQEAWEEQ QIRKSRLHFG SDDGGRAGGG YELVLEGVVD FVKSTVQAGA EPDGEMDELA
0401: EAIDAKVTLQ RELQDERKNL PVYKFKDDLL KAIDKYQVLI IVGETGSGKT TQIPQYLHEA GYTAKGKKIA CTQPRRVAAM SVAARVAQEM GVKLGHEVGY
0501: SIRFEDCTSD KTVIKYMTDG MLLREFLGEP DLASYSVVMV DEAHERTLST DILFGLVKDI ARFRPDVKLL ISSATLNAEK FSDFFDEAPI FKIPGRRYKV
0601: DIHYTTAPEA DYIAAAVVTV LQLHVTQPAG DILLFLTGQE EIETVEEMLK QKMRTFGGKM AELVICPIYA NLPTELQAKI FEPTPEGSRK VVVATNIAET
0701: SLTIDGIKYV IDPGFCKLKS YNPRTGMESL RVEPISKASA DQRAGRSGRT GPGKCFRLFT EYNFRNDLDD DTVPEIQRSN LANVVLRLKA LGINDLVSFD
0801: FMDPPASEAL LKALEELFAL GALNSRGELT KTGRRMAEFP LDPMLSKAIV ASEKYKCSEE VVTIAAMLSA GNAVFYRPKD KLVHADTARQ AFHAGNVGDH
0901: VALLNVYNAW KESGYSSQWC RENFVQPRTM KRARDVRDQL EALLERVEIE HCSGVGDLGA ITKAVTAGYF RNAARRQKDG SYRAVKSRQT VFVHPSSGMA
1001: EVTPSWVVYH ELVLTTKEYM RQVTELKPEW LLEIAPHYYQ RRDIDGHEPK KMAKGKGPAP APL
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.