Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G206600.1 | Wheat | nucleus | 93.32 | 93.39 |
| TraesCS6A01G178200.1 | Wheat | nucleus | 88.42 | 92.6 |
| KXG30805 | Sorghum | nucleus | 74.75 | 75.39 |
| Os02t0736600-01 | Rice | nucleus | 73.58 | 74.45 |
| Zm00001d017967_P003 | Maize | nucleus | 72.57 | 73.03 |
| GSMUA_Achr3P08220_001 | Banana | nucleus | 49.88 | 59.72 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 52.21 | 50.87 |
| Solyc01g095710.2.1 | Tomato | nucleus | 50.51 | 48.47 |
| AT1G33390.2 | Thale cress | nucleus | 46.23 | 48.1 |
| PGSC0003DMT400000297 | Potato | nucleus | 49.81 | 47.98 |
| KRH76262 | Soybean | nucleus | 48.48 | 47.24 |
| KRH65271 | Soybean | nucleus | 48.48 | 47.2 |
| CDY48353 | Canola | nucleus | 44.52 | 46.85 |
| CDY34159 | Canola | nucleus | 44.83 | 46.65 |
| Bra032998.1-P | Field mustard | nucleus | 44.52 | 46.32 |
| HORVU4Hr1G052730.3 | Barley | cytosol | 18.41 | 32.87 |
| HORVU3Hr1G028550.17 | Barley | cytosol | 16.39 | 30.27 |
| HORVU7Hr1G032080.3 | Barley | plastid | 17.02 | 26.74 |
| HORVU1Hr1G056370.1 | Barley | nucleus | 20.05 | 24.27 |
| HORVU1Hr1G056400.1 | Barley | nucleus | 20.05 | 24.23 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 19.5 | 23.24 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 16.94 | 23.07 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 20.67 | 21.42 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 20.12 | 20.51 |
| HORVU5Hr1G094990.5 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 17.33 | 19.39 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 17.79 | 18.36 |
| HORVU3Hr1G074660.7 | Barley | plastid | 15.38 | 15.54 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 16.94 | 12.76 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 17.02 | 12.0 |
| Os02t0736800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU0Hr1G039590 | EnsemblPlants:HORVU0Hr1G039590.6 |
| InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | UniProt:M0XIV6 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF99 | SMART:SM00382 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI000294E8D8 | SEG:seg | : |
Description
No Description!
Coordinates
chrchrUn:+:248872664..248881570
Molecular Weight (calculated)
144918.0 Da
IEP (calculated)
7.973
GRAVY (calculated)
-0.522
Length
1287 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEDSNALIL PCKRKNKAQG IGKDGKKSKS KEDPKMSKIQ QKNLQKLEEE KQKKALQAKS IKILQKHMIA DDVFSLLDTA CSIGQVATMK EKFRRAVQFS
0101: MHGLDVPEEL SLFKKNYDGK GVPGDSEAVP EVSPVKFIKA AKLDHPVSER KNHEKDSMKP MMGLGVSILE QKTEGANDAA GILVRQIIPG QKSDETNDDA
0201: DILAYQTFQS SVQNCSAAEI DFQDKKLQQS EAALQECFNP PIVVPVSRPQ EVEKARRDLP IIMMEQEIME AIYENSVVIL CGETGCGKTT QVPQFLYEAG
0301: FGTSNRAGRK GMIGITQPRR VAVLATSKRV SYELGLKLGK EVGFQVRHDK EVGSKCSIKF MTDGILLREI QGDVLLKHYS VIILDEAHER SLNTDILIGM
0401: LSRIIKLRKD IYAGQQKKKR SGTNVKPEDM ISPLKVVLMS ATLQLKEFIS DRRLFDVIPP TVEVPARQFP VTIHFSKRTY DDYLAQAYKK VLSIHKSLPP
0501: GGILVFVTGQ REVDYLCKKL QRASKRQINK KPERVGDECG SIPEIDEKEI FEAYDIDRTE AEHQENVFSS YGEDEVDDRL NVDSSDAETE SETDTDSNDE
0601: DSAAHETTED GPVLSFLKHA ESSSVLKASF KAISGISGES EAAEESSNVT FAQKSNPSSP SFSKRTEPTS VSHGRLRVLP LYAMQPASHQ LRVFHDIPEG
0701: ERLVVVATNV AETSLTIPGI TYVVDTGKEK VKNYDHATGM ASYDVQWISK ASASQRAGRA GRTGPGHCYR LYSGAAYSKD DLFPEFSEPE IKKMPVDGLV
0801: LMLKFMKIHK VENFPFPTPP NNESLVEAKR CLTTLEALDS KEELTSMGKA MAQYPMSPRH SRLLLTIIKI LKSQQGYARS NFILGYATAV ASALSYANPF
0901: LIQGDTSRES NQDGPYLEHK DQDERKRQKK LKAMVREARK DFSIPSSDAL TISHALRSFE CSRNPVEFCR EYSLHLKTME EMSKLRKQLL RLIFHHSKSC
1001: DEFAWNYGGS EDVEQAWRSE TDKKPMLNEE ELLGQGICAG WADRVAKKIN TFSGLSKEDR KVRAGRYQSC NLDDTIYLHR SSSVAQTPPE FVVYSELLNT
1101: KRPYIHGVTS VKPGWLFKYA SSLCTFSAPL EDPKPYYEPQ NDQVYCYVSP IFSRHNWQLP LHSLPIEDPT RRLQVFAWAL LKGDVLPCLR VVQKFLALSP
1201: SAVLGPASQR RVGDLLSRMK IGGKLKDSRR ALRDAWSSDP DFLYPEIQAW IQDKYKSQFE AIWEQMHQEV RFEGHELFPK RFKKVEG
0101: MHGLDVPEEL SLFKKNYDGK GVPGDSEAVP EVSPVKFIKA AKLDHPVSER KNHEKDSMKP MMGLGVSILE QKTEGANDAA GILVRQIIPG QKSDETNDDA
0201: DILAYQTFQS SVQNCSAAEI DFQDKKLQQS EAALQECFNP PIVVPVSRPQ EVEKARRDLP IIMMEQEIME AIYENSVVIL CGETGCGKTT QVPQFLYEAG
0301: FGTSNRAGRK GMIGITQPRR VAVLATSKRV SYELGLKLGK EVGFQVRHDK EVGSKCSIKF MTDGILLREI QGDVLLKHYS VIILDEAHER SLNTDILIGM
0401: LSRIIKLRKD IYAGQQKKKR SGTNVKPEDM ISPLKVVLMS ATLQLKEFIS DRRLFDVIPP TVEVPARQFP VTIHFSKRTY DDYLAQAYKK VLSIHKSLPP
0501: GGILVFVTGQ REVDYLCKKL QRASKRQINK KPERVGDECG SIPEIDEKEI FEAYDIDRTE AEHQENVFSS YGEDEVDDRL NVDSSDAETE SETDTDSNDE
0601: DSAAHETTED GPVLSFLKHA ESSSVLKASF KAISGISGES EAAEESSNVT FAQKSNPSSP SFSKRTEPTS VSHGRLRVLP LYAMQPASHQ LRVFHDIPEG
0701: ERLVVVATNV AETSLTIPGI TYVVDTGKEK VKNYDHATGM ASYDVQWISK ASASQRAGRA GRTGPGHCYR LYSGAAYSKD DLFPEFSEPE IKKMPVDGLV
0801: LMLKFMKIHK VENFPFPTPP NNESLVEAKR CLTTLEALDS KEELTSMGKA MAQYPMSPRH SRLLLTIIKI LKSQQGYARS NFILGYATAV ASALSYANPF
0901: LIQGDTSRES NQDGPYLEHK DQDERKRQKK LKAMVREARK DFSIPSSDAL TISHALRSFE CSRNPVEFCR EYSLHLKTME EMSKLRKQLL RLIFHHSKSC
1001: DEFAWNYGGS EDVEQAWRSE TDKKPMLNEE ELLGQGICAG WADRVAKKIN TFSGLSKEDR KVRAGRYQSC NLDDTIYLHR SSSVAQTPPE FVVYSELLNT
1101: KRPYIHGVTS VKPGWLFKYA SSLCTFSAPL EDPKPYYEPQ NDQVYCYVSP IFSRHNWQLP LHSLPIEDPT RRLQVFAWAL LKGDVLPCLR VVQKFLALSP
1201: SAVLGPASQR RVGDLLSRMK IGGKLKDSRR ALRDAWSSDP DFLYPEIQAW IQDKYKSQFE AIWEQMHQEV RFEGHELFPK RFKKVEG
0001: MASVVGDDCN LDVMPPRKKK NKGSNKMQDK LNSNNNTGSK KSRKRKLNSN VNTVACKSQK RKLKKLEEDK EKEILFSKTA ELLDKYKISE DVSSLLQSSK
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
Arabidopsis Description
FAS4FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.