Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G056370.1 | Barley | nucleus | 99.81 | 100.0 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 92.02 | 92.37 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 91.92 | 92.36 |
| TraesCS1A01G243400.1 | Wheat | nucleus | 91.83 | 92.26 |
| Os05t0389800-01 | Rice | nucleus | 74.08 | 73.74 |
| OQU77934 | Sorghum | nucleus | 72.21 | 72.14 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 63.94 | 63.06 |
| HORVU4Hr1G052730.3 | Barley | cytosol | 32.77 | 48.41 |
| HORVU3Hr1G028550.17 | Barley | cytosol | 28.08 | 42.9 |
| HORVU7Hr1G032080.3 | Barley | plastid | 31.36 | 40.78 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 41.03 | 35.19 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 35.12 | 29.61 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 23.57 | 26.56 |
| HORVU5Hr1G094990.5 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 22.25 | 20.61 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 24.23 | 20.05 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 22.16 | 18.93 |
| HORVU3Hr1G074660.7 | Barley | plastid | 19.44 | 16.25 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 22.44 | 13.99 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 22.25 | 12.99 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | UniProt:A0A287FQM0 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU1Hr1G056400 | EnsemblPlants:HORVU1Hr1G056400.1 |
| InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 |
| SUPFAM:SSF52540 | UniParc:UPI000B462FFD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:413857103..413860351
Molecular Weight (calculated)
118859.0 Da
IEP (calculated)
5.797
GRAVY (calculated)
-0.511
Length
1065 amino acids
Sequence
(BLAST)
(BLAST)
0001: RAMASEERQL KTRVSDRLMA LVGYSEVMVV RLVLRLARES ASAADLAARL VDLAGLPSSA DTVAFAEDVH AMFPRKGSRV SEYRKQVQEA AAFAKKQSAF
0101: KLLDDEDDHA QDAGAIATAT ASSSNTSGKK RFRQNAASPG DDDEEEEGTV MRDSGRKVRA QRAPAEDGDG SDGEELEEMD RDQIEKAQLD RHIRERDAAS
0201: TRKLTDRKPT KREQGELGRR SEALDRGDTS ELRTASRQAY LEKRKKMKVE EMQDEIIDNE FIFDGVKMTN AEEMELRRKK EIYDLVKVSV GKDADADAGD
0301: YYRMPDAYDA AANVDQAKRF AVQRQRYDDP EAAARDGKRS NFFSEQEAWE EQQIRKSRLH FGSDDGGRAG GGYELVLEGV VDFVKSTVQA GAEPDGEMDE
0401: LAEAIDAKVT LQRELQDERK NLPVYKFKDD LLKAIDKYQV LIIVGETGSG KTTQIPQYLH EAGYTAKGKK IACTQPRRVA AMSVAARVAQ EMGVKLGHEV
0501: GYSIRFEDCT SDKTVIKYMT DGMLLREFLG EPDLASYSVV MVDEAHERTL STDILFGLVK DIARFRPDVK LLISSATLNA EKFSDFFDEA PIFKIPGRRY
0601: KVDIHYTTAP EADYIAAAVV TVLQLHVTQP AGDILLFLTG QEEIETVEEM LKQKMRTFGG KMAELVICPI YANLPTELQA KIFEPTPEGS RKVVVATNIA
0701: ETSLTIDGIK YVIDPGFCKL KSYNPRTGME SLRVEPISKA SADQRAGRSG RTGPGKCFRL FTEYNFRNDL DDDTVPEIQR SNLANVVLRL KALGINDLVS
0801: FDFMDPPASE ALLKALEELF ALGALNSRGE LTKTGRRMAE FPLDPMLSKA IVASEKYKCS EEVVTIAAML SAGNAVFYRP KDKLVHADTA RQAFHAGNVG
0901: DHVALLNVYN AWKESGYSSQ WCRENFVQPR TMKRARDVRD QLEALLERVE IEHCSGVGDL GAITKAVTAG YFRNAARRQK DGSYRAVKSR QTVFVHPSSG
1001: MAEVTPSWVV YHELVLTTKE YMRQVTELKP EWLLEIAPHY YQRRDIDGHE PKKMAKGKGP APAPL
0101: KLLDDEDDHA QDAGAIATAT ASSSNTSGKK RFRQNAASPG DDDEEEEGTV MRDSGRKVRA QRAPAEDGDG SDGEELEEMD RDQIEKAQLD RHIRERDAAS
0201: TRKLTDRKPT KREQGELGRR SEALDRGDTS ELRTASRQAY LEKRKKMKVE EMQDEIIDNE FIFDGVKMTN AEEMELRRKK EIYDLVKVSV GKDADADAGD
0301: YYRMPDAYDA AANVDQAKRF AVQRQRYDDP EAAARDGKRS NFFSEQEAWE EQQIRKSRLH FGSDDGGRAG GGYELVLEGV VDFVKSTVQA GAEPDGEMDE
0401: LAEAIDAKVT LQRELQDERK NLPVYKFKDD LLKAIDKYQV LIIVGETGSG KTTQIPQYLH EAGYTAKGKK IACTQPRRVA AMSVAARVAQ EMGVKLGHEV
0501: GYSIRFEDCT SDKTVIKYMT DGMLLREFLG EPDLASYSVV MVDEAHERTL STDILFGLVK DIARFRPDVK LLISSATLNA EKFSDFFDEA PIFKIPGRRY
0601: KVDIHYTTAP EADYIAAAVV TVLQLHVTQP AGDILLFLTG QEEIETVEEM LKQKMRTFGG KMAELVICPI YANLPTELQA KIFEPTPEGS RKVVVATNIA
0701: ETSLTIDGIK YVIDPGFCKL KSYNPRTGME SLRVEPISKA SADQRAGRSG RTGPGKCFRL FTEYNFRNDL DDDTVPEIQR SNLANVVLRL KALGINDLVS
0801: FDFMDPPASE ALLKALEELF ALGALNSRGE LTKTGRRMAE FPLDPMLSKA IVASEKYKCS EEVVTIAAML SAGNAVFYRP KDKLVHADTA RQAFHAGNVG
0901: DHVALLNVYN AWKESGYSSQ WCRENFVQPR TMKRARDVRD QLEALLERVE IEHCSGVGDL GAITKAVTAG YFRNAARRQK DGSYRAVKSR QTVFVHPSSG
1001: MAEVTPSWVV YHELVLTTKE YMRQVTELKP EWLLEIAPHY YQRRDIDGHE PKKMAKGKGP APAPL
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.