Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G243400.1 | Wheat | nucleus | 96.23 | 96.23 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 95.75 | 95.66 |
| HORVU1Hr1G056370.1 | Barley | nucleus | 92.36 | 92.1 |
| HORVU1Hr1G056400.1 | Barley | nucleus | 92.36 | 91.92 |
| Os05t0389800-01 | Rice | nucleus | 73.68 | 72.99 |
| OQU77934 | Sorghum | nucleus | 72.45 | 72.05 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 66.79 | 67.69 |
| TraesCS4B01G180200.1 | Wheat | cytosol | 32.36 | 47.57 |
| TraesCS3B01G165500.1 | Wheat | nucleus | 29.91 | 45.22 |
| TraesCS7B01G060800.1 | Wheat | plastid | 30.38 | 45.16 |
| TraesCS1B01G398400.1 | Wheat | cytosol | 14.91 | 40.0 |
| TraesCS4B01G075500.1 | Wheat | nucleus | 25.28 | 38.01 |
| TraesCS7B01G245800.1 | Wheat | nucleus | 37.83 | 37.27 |
| TraesCS4B01G148500.1 | Wheat | nucleus | 40.47 | 34.77 |
| TraesCS1B01G398100.1 | Wheat | cytosol | 22.36 | 34.4 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 35.19 | 29.53 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 23.96 | 24.64 |
| TraesCS5B01G392800.1 | Wheat | nucleus | 22.26 | 20.52 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 23.96 | 19.75 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 24.15 | 19.41 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 22.36 | 19.01 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 19.81 | 17.57 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 23.58 | 17.51 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 22.45 | 14.64 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 22.55 | 13.78 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 16.51 | 13.23 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 |
| PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS1B01G254900 | EnsemblPlants:TraesCS1B01G254900.1 |
| TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1B:-:449391981..449395163
Molecular Weight (calculated)
118491.0 Da
IEP (calculated)
6.147
GRAVY (calculated)
-0.519
Length
1060 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASEEGQLKT RVSDRLMALL GYSEVMVVRL VLRLARDSAS AADLAARLVD LAGLPSSADT VAFAEDVHAM FPRKGSRVSE YRKQVQEAAA FAKRQSALKL
0101: LDDEDDVAED AGATTTAWSS NSNIKKRFRQ KAASQGDDDG EEEATVMRDS GRKVRARRAP ATDGGDSGGE ELEEMDRDQI EKAQLDQHIR ERDAASTRKL
0201: TDGKPSKREQ GELARRSEAM DRGDTSELRT ASRHAYLEKR KKMKVEEMRD EIIDNELIFH GVKMTNAEEQ EFRRKKEIYE LVKDRVGKDA DAGDYYRMPE
0301: AYDAAENLDQ AKRFAVPRQR YDDPEASAAR GGRRSNFFSE QEAWEEQQIR KSRLNFGSGD GGRAGGGYEL VLEDVVDFVK STVQAGAEPD GEMDELAEAV
0401: DAKVKLQREL QDERKNLPVY KFKDDLLKAI EKYQVLIIVG ETGSGKTTQI PQYLHEAGYT AKGKKIACTQ PRRVAAMSVA ARVAQELGVK LGHEVGYSIR
0501: FEDCTSDKTV IKYMTDGMLL REFLGEPDLA SYSVVIVDEA HERTLSTDIL FGLVKDIARF RPDVKLLISS ATLNAERFSD FFDEAPIFKI PGRRYKVDIH
0601: YTTAPEADYI AAAVVTVLQL HVKQPAGDIL LFLTGQEEIE TVEELLKQKM RTVGSKIAEL VICPIYANLP TELQAKIFEP TPEGARKVVL ATNIAETSLT
0701: IDGIKYVIDP GFCKLKSYNP RTGMESLRVE PISKASADQR AGRSGRTGPG KCFRLFTEYN FRHDLDDDTV PEIQRSNLAN VVLRLKALGI NDLVSFDFMD
0801: PPASEALLKA LEELFALGTL NSRGELTKTG RRMAEFPLDP MLSKAIVASE KYGCSEEVVT IAAMLSAGNA VFYRPKDKLV LADTARQAFH AGNVGDHVAL
0901: LNVYNAWTES GYSSQWCREN FVQPRTMKRA RDVRDQLEAL LERVEIEHCS GAGDLDGIRK AVTAGYFRNA ARRQKDGSYR AVKSRQMVFV HPSSGMAELP
1001: PTWVVYHELV LTSKEYMRQV TELKPEWLLE IAPHYYQRKD IDGHQPKKTA KDKGPAARQT
0101: LDDEDDVAED AGATTTAWSS NSNIKKRFRQ KAASQGDDDG EEEATVMRDS GRKVRARRAP ATDGGDSGGE ELEEMDRDQI EKAQLDQHIR ERDAASTRKL
0201: TDGKPSKREQ GELARRSEAM DRGDTSELRT ASRHAYLEKR KKMKVEEMRD EIIDNELIFH GVKMTNAEEQ EFRRKKEIYE LVKDRVGKDA DAGDYYRMPE
0301: AYDAAENLDQ AKRFAVPRQR YDDPEASAAR GGRRSNFFSE QEAWEEQQIR KSRLNFGSGD GGRAGGGYEL VLEDVVDFVK STVQAGAEPD GEMDELAEAV
0401: DAKVKLQREL QDERKNLPVY KFKDDLLKAI EKYQVLIIVG ETGSGKTTQI PQYLHEAGYT AKGKKIACTQ PRRVAAMSVA ARVAQELGVK LGHEVGYSIR
0501: FEDCTSDKTV IKYMTDGMLL REFLGEPDLA SYSVVIVDEA HERTLSTDIL FGLVKDIARF RPDVKLLISS ATLNAERFSD FFDEAPIFKI PGRRYKVDIH
0601: YTTAPEADYI AAAVVTVLQL HVKQPAGDIL LFLTGQEEIE TVEELLKQKM RTVGSKIAEL VICPIYANLP TELQAKIFEP TPEGARKVVL ATNIAETSLT
0701: IDGIKYVIDP GFCKLKSYNP RTGMESLRVE PISKASADQR AGRSGRTGPG KCFRLFTEYN FRHDLDDDTV PEIQRSNLAN VVLRLKALGI NDLVSFDFMD
0801: PPASEALLKA LEELFALGTL NSRGELTKTG RRMAEFPLDP MLSKAIVASE KYGCSEEVVT IAAMLSAGNA VFYRPKDKLV LADTARQAFH AGNVGDHVAL
0901: LNVYNAWTES GYSSQWCREN FVQPRTMKRA RDVRDQLEAL LERVEIEHCS GAGDLDGIRK AVTAGYFRNA ARRQKDGSYR AVKSRQMVFV HPSSGMAELP
1001: PTWVVYHELV LTSKEYMRQV TELKPEWLLE IAPHYYQRKD IDGHQPKKTA KDKGPAARQT
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.