Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G233700.1 | Wheat | nucleus | 99.21 | 99.21 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 98.34 | 98.34 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 98.97 | 89.09 |
| Os07t0508000-01 | Rice | nucleus | 89.94 | 88.75 |
| VIT_01s0010g02920.t01 | Wine grape | nucleus | 61.12 | 88.23 |
| KXG36287 | Sorghum | nucleus | 89.07 | 87.55 |
| Zm00001d006459_P003 | Maize | plastid | 86.3 | 80.98 |
| Solyc12g089010.1.1 | Tomato | nucleus | 51.46 | 80.25 |
| PGSC0003DMT400039875 | Potato | nucleus | 54.24 | 74.21 |
| KRH23170 | Soybean | nucleus | 74.66 | 74.19 |
| CDY23802 | Canola | nucleus | 30.8 | 74.1 |
| KRH10165 | Soybean | nucleus | 73.95 | 73.43 |
| Bra023387.1-P | Field mustard | nucleus | 72.13 | 73.0 |
| CDX85676 | Canola | nucleus | 72.05 | 72.92 |
| CDX91151 | Canola | nucleus | 72.05 | 72.86 |
| PGSC0003DMT400018531 | Potato | nucleus | 73.56 | 72.3 |
| Solyc10g076910.1.1 | Tomato | nucleus | 73.48 | 72.22 |
| AT5G13010.1 | Thale cress | nucleus | 71.65 | 72.11 |
| TraesCS7B01G060800.1 | Wheat | plastid | 23.67 | 41.94 |
| TraesCS3B01G165500.1 | Wheat | nucleus | 22.64 | 40.8 |
| TraesCS4B01G180200.1 | Wheat | cytosol | 23.2 | 40.64 |
| TraesCS4B01G075500.1 | Wheat | nucleus | 22.33 | 40.0 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 30.88 | 37.28 |
| TraesCS1B01G398400.1 | Wheat | cytosol | 11.4 | 36.46 |
| TraesCS7B01G245800.1 | Wheat | nucleus | 30.25 | 35.5 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 29.53 | 35.19 |
| TraesCS4B01G148500.1 | Wheat | nucleus | 33.33 | 34.12 |
| TraesCS1B01G398100.1 | Wheat | cytosol | 16.07 | 29.46 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 19.24 | 23.57 |
| TraesCS5B01G392800.1 | Wheat | nucleus | 19.24 | 21.13 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 21.06 | 20.68 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 21.46 | 20.55 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 19.0 | 19.25 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 17.26 | 18.24 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 19.56 | 17.3 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 19.64 | 15.25 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 19.95 | 14.53 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 14.33 | 13.68 |
Protein Annotations
Description
No Description!
Coordinates
chr2B:+:258636279..258643490
Molecular Weight (calculated)
142197.0 Da
IEP (calculated)
6.798
GRAVY (calculated)
-0.677
Length
1263 amino acids
Sequence
(BLAST)
(BLAST)
0001: MSSDGRLDLD ATTSTLGPED DTAQGLILPT KDKVMYRPPP GKSALGLDLL AHKKREKEGN NSFKRPPEKV VTVASSMDED ERPGSTENDA SSLSGGDRGS
0101: VARRYRGTNS SEKTSSKEST VTDENERGLT PRHRDESHRQ QTPASRYEPN DDRGSRDKRG ERETSASIGY SSSGKRGYRD DRESNSRRNE RSRSTSIDYT
0201: NKRSRDDYSL RSSRTPARSD WDSGRWEWED TPRREYRDDR PGSQRHYPTR SPMLAAASPD ARLVSPWLGG NTPRSAASPW DHVSPSPAPV RASGSSKGSS
0301: YSSSSGRSHQ LTFSNDAEAD RSPSAADRNY EITEEMMQEM DYNADRAWYD CEEHNTVFDG DNYAADDSSY KKKEAQLPKK LTRKDGSLMT LSQSKKLSQM
0401: TADNAQWEDR QLLRSGAVRG TEVQTEFDDE DERKVILLVH DTKPPFLDGR VVYTKQAEPV MPLKDPTSDM AIIARKGSVL VREIREKQSQ NKSRQRFWEL
0501: AGSNLGNILG VEKTSEQVDA DTAVVGDQGE IDFKEEAKFS QHLKEKAEAV SDFARSKSLS QQRQYLPIYT VRDDLLQVVR ENQVVVVVGE TGSGKTTQLT
0601: QYLHEDGYTT TGVVGCTQPR RVAAMSVAKR VSEEMETELG DKVGYAIRFE DVTCSSTIIK YMTDGVLLRE TLKDADLDKY RVIVMDEAHE RSLNTDVLFG
0701: ILKKVVARRR DFKLIVTSAT LNADKFSKFF GGVPVFNIPG RTFPVNILFS KTPCEDYVEA AVKQAMTIHI TSGPGDILIF MTGQEEIEAT CYALAERMEQ
0801: LISSSTKNVP KLSILPIYSQ LPADLQAKIF QKAEEGTRKC IVATNIAETS LTVDGIFYVI DTGYGKMKVY NPRMGMDALQ VFPCSRAAAD QRAGRAGRTG
0901: PGTCYRLFTE SAYQNEMLPN PVPEIQRTNL GNVVLLLKSL KVENLLDFDF MDPPPQENIL NSMYQLWVLG ALNNVGGLTE IGWKMVEFPL DPTLAKMLLM
1001: GEKLDCLDEV LTIVSMLSVP SVFFRPKDRA EESDAAREKF FVPESDHLTL LNVYLQWKSN QYRGDWCNDH FLHVKGLRKA REVRSQLLDI LKALKIPLTS
1101: CHMEWDVVRK AICSAYFHNS ARLKGIGEYV NCRNGMPCHL HPSSALYGLG YTPDYVVYHE LVLTTKEYMQ CVSAVDPQWL AELGPMFFSV KDTDTSLLDH
1201: KKRQKEEKTA MEEEMEKLRQ EQAEAALVEK ERERRKRAKQ QQQISMPGLK KGSTYLRPKK MGL
0101: VARRYRGTNS SEKTSSKEST VTDENERGLT PRHRDESHRQ QTPASRYEPN DDRGSRDKRG ERETSASIGY SSSGKRGYRD DRESNSRRNE RSRSTSIDYT
0201: NKRSRDDYSL RSSRTPARSD WDSGRWEWED TPRREYRDDR PGSQRHYPTR SPMLAAASPD ARLVSPWLGG NTPRSAASPW DHVSPSPAPV RASGSSKGSS
0301: YSSSSGRSHQ LTFSNDAEAD RSPSAADRNY EITEEMMQEM DYNADRAWYD CEEHNTVFDG DNYAADDSSY KKKEAQLPKK LTRKDGSLMT LSQSKKLSQM
0401: TADNAQWEDR QLLRSGAVRG TEVQTEFDDE DERKVILLVH DTKPPFLDGR VVYTKQAEPV MPLKDPTSDM AIIARKGSVL VREIREKQSQ NKSRQRFWEL
0501: AGSNLGNILG VEKTSEQVDA DTAVVGDQGE IDFKEEAKFS QHLKEKAEAV SDFARSKSLS QQRQYLPIYT VRDDLLQVVR ENQVVVVVGE TGSGKTTQLT
0601: QYLHEDGYTT TGVVGCTQPR RVAAMSVAKR VSEEMETELG DKVGYAIRFE DVTCSSTIIK YMTDGVLLRE TLKDADLDKY RVIVMDEAHE RSLNTDVLFG
0701: ILKKVVARRR DFKLIVTSAT LNADKFSKFF GGVPVFNIPG RTFPVNILFS KTPCEDYVEA AVKQAMTIHI TSGPGDILIF MTGQEEIEAT CYALAERMEQ
0801: LISSSTKNVP KLSILPIYSQ LPADLQAKIF QKAEEGTRKC IVATNIAETS LTVDGIFYVI DTGYGKMKVY NPRMGMDALQ VFPCSRAAAD QRAGRAGRTG
0901: PGTCYRLFTE SAYQNEMLPN PVPEIQRTNL GNVVLLLKSL KVENLLDFDF MDPPPQENIL NSMYQLWVLG ALNNVGGLTE IGWKMVEFPL DPTLAKMLLM
1001: GEKLDCLDEV LTIVSMLSVP SVFFRPKDRA EESDAAREKF FVPESDHLTL LNVYLQWKSN QYRGDWCNDH FLHVKGLRKA REVRSQLLDI LKALKIPLTS
1101: CHMEWDVVRK AICSAYFHNS ARLKGIGEYV NCRNGMPCHL HPSSALYGLG YTPDYVVYHE LVLTTKEYMQ CVSAVDPQWL AELGPMFFSV KDTDTSLLDH
1201: KKRQKEEKTA MEEEMEKLRQ EQAEAALVEK ERERRKRAKQ QQQISMPGLK KGSTYLRPKK MGL
0001: MGVDPFKTTE TLEADKETNG GVPVKDKLTF KAPERKSRLG LDARAIEKKD NAKTEGEFKV PKKSAISVTS SLDEEDKSDV SGLDFGTENT RPVHSSRRYR
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
Arabidopsis Description
CUVPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Source:UniProtKB/Swiss-Prot;Acc:F4K2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.