Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G047870.2 | Barley | nucleus | 88.83 | 90.02 |
| TraesCS2A01G233700.1 | Wheat | nucleus | 88.83 | 90.02 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 88.75 | 89.94 |
| KXG36287 | Sorghum | nucleus | 90.16 | 89.81 |
| VIT_01s0010g02920.t01 | Wine grape | nucleus | 60.86 | 89.03 |
| TraesCS3D01G264900.1 | Wheat | plastid | 60.62 | 84.26 |
| Zm00001d006459_P003 | Maize | plastid | 87.42 | 83.14 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 88.59 | 80.83 |
| Solyc12g089010.1.1 | Tomato | nucleus | 50.78 | 80.25 |
| KRH23170 | Soybean | nucleus | 73.98 | 74.51 |
| PGSC0003DMT400039875 | Potato | nucleus | 53.67 | 74.43 |
| CDY23802 | Canola | nucleus | 30.47 | 74.29 |
| KRH10165 | Soybean | nucleus | 73.12 | 73.58 |
| Solyc10g076910.1.1 | Tomato | nucleus | 73.59 | 73.31 |
| PGSC0003DMT400018531 | Potato | nucleus | 73.59 | 73.31 |
| Bra023387.1-P | Field mustard | nucleus | 70.78 | 72.6 |
| CDX91151 | Canola | nucleus | 70.78 | 72.54 |
| CDX85676 | Canola | nucleus | 70.62 | 72.44 |
| AT5G13010.1 | Thale cress | nucleus | 70.16 | 71.55 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 14.61 | 50.95 |
| Os02t0301500-01 | Rice | nucleus | 21.33 | 50.0 |
| Os03t0314100-01 | Rice | cytosol, nucleus, plastid | 18.75 | 42.55 |
| Os06t0192500-02 | Rice | mitochondrion | 13.28 | 41.67 |
| Os01t0212100-01 | Rice | nucleus | 22.5 | 41.14 |
| Os11t0310800-01 | Rice | nucleus | 22.19 | 40.11 |
| Os05t0389800-01 | Rice | nucleus | 30.7 | 36.73 |
| Os06t0343100-01 | Rice | nucleus | 30.94 | 36.53 |
| Os10t0471350-01 | Rice | nucleus | 19.22 | 24.65 |
| Os01t0118100-01 | Rice | cytosol, mitochondrion, nucleus | 14.38 | 22.49 |
| Os03t0748800-01 | Rice | mitochondrion | 19.14 | 21.3 |
| Os02t0736600-01 | Rice | nucleus | 20.16 | 20.28 |
| Os01t0767700-01 | Rice | nucleus | 17.34 | 18.15 |
| Os07t0621500-01 | Rice | cytosol, nucleus | 11.64 | 11.58 |
| Os04t0432200-00 | Rice | extracellular | 0.55 | 9.59 |
| Os02t0736800-01 | Rice | mitochondrion | 0.08 | 1.04 |
Protein Annotations
Description
Similar to ADR224Wp. (Os07t0508000-01)
Coordinates
chr7:-:19290923..19299094
Molecular Weight (calculated)
144338.0 Da
IEP (calculated)
6.881
GRAVY (calculated)
-0.695
Length
1280 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEGDMDATMT TLGPEDDTGA QGLILPSRDR VMYRPPPGKS ALGLDLLAHR KREAEGGNAF KPPPQKVVAA ATSIDEDEKP GPAESDEKSL SSGHRGSVSR
0101: RYRGANSDER TSFKEPTITD EDGRGPSPSH RDGSYRQDTH KSRSSQGSHS RSTPRRYDDY EDRGSRDKHG ERERSASIGY SSSGRRGHHD DRESHNRRDE
0201: RERSTSVDYM NKRSRHEHSS RSSRTPARSD WDSGRWEWED TPRREYRDDR SNSHRQHPSP SPMLAAASPD ARLVSPWLGG NTPRYAASPW DNVSPSPAPI
0301: RASGSSKGSS YPRSGGRSHQ LTFSSTSASN DRESDRSPSD ADGNYEISEE MMQEMDYNAD RAWYDCEEHN TMFDGDNSMY LEDDSSYKKR EAQLPKRLTR
0401: KDGSLMTLAQ SKKLSQMTAD NAQWEDRQLL RSGAVRGTEV QTEFDDEDER KVILLVHDTK PPFLDGRVVF TKQAEPVMPL KDPTSDMAIV ARKGSALVRE
0501: IREKQSMNKS RQRFWELAGS KLGNILGVEK TAEQVDADTA TVGDQGEIDF KEEAKFSQHM KVKAEAVSDF AKSKSLSQQR QYLPIFTVRD DLLQVVRENQ
0601: VVVVVGETGS GKTTQLTQYL HEDGYTTTGI VGCTQPRRVA AMSVAKRVSE EMETELGHKV GYAIRFEDMT SPNTIIKYMT DGVLLRETLK DADLDKYRVI
0701: VMDEAHERSL NTDVLFGILK KVVARRRDFK LIVTSATLNA DKFSKFFGGV PVFHIPGRTF PVNIMFSKTP CEDYVEAAVK QAMTIHITSG PGDILIFMTG
0801: QEEIEATCYA LAERLEQLIS SSTKTVPKLS ILPIYSQLPA DLQAKIFQKA EEGTRKCIVA TNIAETSLTV DGIFYVIDTG YGKMKVYNPR MGMDALQVFP
0901: VSRAAADQRA GRAGRTGPGT CYRLFTESAY QNEMLPNPVP EIQRTNLGNV VLLLKSLKVE NLLDFDFMDP PPQENILNSM YQLWVLGALN NVGALTVIGW
1001: KMVEFPLDPT LAKMLLMGEQ LECLDEVLTI VSMLSVPSVF FRPKDRAEES DAAREKFFVP ESDHLTLLNV YLQWKSNQYR GDWCNDHFLH VKGLRKAREV
1101: RSQLLDILKT LKIPLTSCHM EWDVVRKAIC SAYFHNAARL KGVGEYVNCR NGMPCHLHPS SALYGLGYTP DYVVYHELVL TTKEYMQCVT AVDPQWLAEL
1201: GPMFFSVKET DTSLLDHKKR QKEDKTAMEE EMEKLRQEQA EAARLEKERE REKRAKQQQQ VSMPGLKKGS TYLRPKRMGL
0101: RYRGANSDER TSFKEPTITD EDGRGPSPSH RDGSYRQDTH KSRSSQGSHS RSTPRRYDDY EDRGSRDKHG ERERSASIGY SSSGRRGHHD DRESHNRRDE
0201: RERSTSVDYM NKRSRHEHSS RSSRTPARSD WDSGRWEWED TPRREYRDDR SNSHRQHPSP SPMLAAASPD ARLVSPWLGG NTPRYAASPW DNVSPSPAPI
0301: RASGSSKGSS YPRSGGRSHQ LTFSSTSASN DRESDRSPSD ADGNYEISEE MMQEMDYNAD RAWYDCEEHN TMFDGDNSMY LEDDSSYKKR EAQLPKRLTR
0401: KDGSLMTLAQ SKKLSQMTAD NAQWEDRQLL RSGAVRGTEV QTEFDDEDER KVILLVHDTK PPFLDGRVVF TKQAEPVMPL KDPTSDMAIV ARKGSALVRE
0501: IREKQSMNKS RQRFWELAGS KLGNILGVEK TAEQVDADTA TVGDQGEIDF KEEAKFSQHM KVKAEAVSDF AKSKSLSQQR QYLPIFTVRD DLLQVVRENQ
0601: VVVVVGETGS GKTTQLTQYL HEDGYTTTGI VGCTQPRRVA AMSVAKRVSE EMETELGHKV GYAIRFEDMT SPNTIIKYMT DGVLLRETLK DADLDKYRVI
0701: VMDEAHERSL NTDVLFGILK KVVARRRDFK LIVTSATLNA DKFSKFFGGV PVFHIPGRTF PVNIMFSKTP CEDYVEAAVK QAMTIHITSG PGDILIFMTG
0801: QEEIEATCYA LAERLEQLIS SSTKTVPKLS ILPIYSQLPA DLQAKIFQKA EEGTRKCIVA TNIAETSLTV DGIFYVIDTG YGKMKVYNPR MGMDALQVFP
0901: VSRAAADQRA GRAGRTGPGT CYRLFTESAY QNEMLPNPVP EIQRTNLGNV VLLLKSLKVE NLLDFDFMDP PPQENILNSM YQLWVLGALN NVGALTVIGW
1001: KMVEFPLDPT LAKMLLMGEQ LECLDEVLTI VSMLSVPSVF FRPKDRAEES DAAREKFFVP ESDHLTLLNV YLQWKSNQYR GDWCNDHFLH VKGLRKAREV
1101: RSQLLDILKT LKIPLTSCHM EWDVVRKAIC SAYFHNAARL KGVGEYVNCR NGMPCHLHPS SALYGLGYTP DYVVYHELVL TTKEYMQCVT AVDPQWLAEL
1201: GPMFFSVKET DTSLLDHKKR QKEDKTAMEE EMEKLRQEQA EAARLEKERE REKRAKQQQQ VSMPGLKKGS TYLRPKRMGL
0001: MGVDPFKTTE TLEADKETNG GVPVKDKLTF KAPERKSRLG LDARAIEKKD NAKTEGEFKV PKKSAISVTS SLDEEDKSDV SGLDFGTENT RPVHSSRRYR
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
Arabidopsis Description
CUVPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Source:UniProtKB/Swiss-Prot;Acc:F4K2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.