Factsheet for Os03t0748800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37551	Sorghum	nucleus, vacuole	93.3	93.14
TraesCS5D01G397600.1	Wheat	nucleus	92.87	92.87
TraesCS5B01G392800.1	Wheat	nucleus	92.87	92.87
TraesCS5A01G387700.2	Wheat	golgi, nucleus	92.61	92.21
HORVU5Hr1G094990.5	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	91.91	91.91
Zm00001d034013_P002	Maize	golgi, mitochondrion, vacuole	91.91	88.16
GSMUA_Achr4P07530_001	Banana	mitochondrion	82.35	81.29
KRH44757	Soybean	plastid	78.0	77.26
AT5G04895.1	Thale cress	mitochondrion	77.22	76.49
Solyc01g006710.2.1	Tomato	mitochondrion	77.13	76.2
PGSC0003DMT400055091	Potato	mitochondrion	77.13	76.2
Bra009414.1-P	Field mustard	mitochondrion	76.09	75.76
CDX98799	Canola	mitochondrion	76.0	75.74
CDX70187	Canola	mitochondrion	76.09	75.69
KRH13104	Soybean	mitochondrion	24.78	66.59
Os01t0118100-01	Rice	cytosol, mitochondrion, nucleus	47.04	66.14
Os10t0471350-01	Rice	nucleus	39.74	45.79
Os08t0335000-00	Rice	cytosol, nucleus	11.39	35.69
Os03t0314100-01	Rice	cytosol, nucleus, plastid	17.04	34.75
Os02t0301500-01	Rice	nucleus	15.91	33.52
Os01t0212100-01	Rice	nucleus	18.87	31.0
Os11t0310800-01	Rice	nucleus	18.43	29.94
Os06t0192500-02	Rice	mitochondrion	9.39	26.47
Os01t0767700-01	Rice	nucleus	27.04	25.43
Os06t0343100-01	Rice	nucleus	22.87	24.26
Os05t0389800-01	Rice	nucleus	20.52	22.06
Os07t0508000-01	Rice	nucleus	21.3	19.14
Os02t0736600-01	Rice	nucleus	19.3	17.45
Os04t0432200-00	Rice	extracellular	0.87	13.7
Os07t0621500-01	Rice	cytosol, nucleus	13.74	12.28
PGSC0003DMT400041647	Potato	cytosol	2.17	6.81
Os02t0736800-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

Gene3D:1.20.120.1080	Gene3D:3.30.160.20	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:4334111	UniProt:A0A0P0W309
ProteinID:BAS86386.1	InterPro:DEAD/DEAH_box_helicase_dom	InterPro:DUF1605	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003824	GO:GO:0004004	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006396
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:Helicase-assoc_dom	InterPro:Helicase_ATP-bd
InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014720	EnsemblPlantsGene:Os03g0748800	EnsemblPlants:Os03t0748800-01
InterPro:P-loop_NTPase	PFAM:PF00035	PFAM:PF00270	PFAM:PF00271	PFAM:PF04408	PFAM:PF07717
PFscan:PS50137	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR18934	PANTHER:PTHR18934:SF103	SMART:SM00358
SMART:SM00487	SMART:SM00490	SMART:SM00847	SUPFAM:SSF52540	SUPFAM:SSF54768	SignalP:SignalP-noTM
UniParc:UPI00018EEF1F	RefSeq:XP_015630592.1	InterPro:dsRBD_dom	SEG:seg	:	:

Description

Similar to Helicase associated domain family protein, expressed. (Os03t0748800-01)

Coordinates

chr3:-:30815621..30822590

Molecular Weight (calculated)

129521.0 Da

IEP (calculated)

8.714

GRAVY (calculated)

-0.364

Length

1150 amino acids

Sequence
(BLAST)

0001: MRGGLRRGLG ILLLPLSSSP SRAPRPPVPL AALLVYHRRL DVFARRSFCS SGGGYAVEQF SDDEYDHEYE DHRPSSSVAN IDEWRWKLSM LQRNAEEQEI
0101: ISRDRRDRRD YDQIANLAKR MGLYSEMYGK VIVASKVPLP NYRPDLDDKR PQREVVIPLS LQRRVEGLVQ EHLDRALLPD KCGTGNGSEM AEKAENVNLD
0201: EQQDSLLDRS VMEKILQRKS IRMRNFQRSW QESPEGVKML EFRKSLPAYK EKERLLAAIA RNQVIVISGE TGCGKTTQLP QFVLESEIES GRGAFCNIIC
0301: TQPRRISAMA VAERVSTERG ENLGESVGYK VRLEGIKGKD THLLFCTSGI LLRRLLSDRN LNGVTHVFVD EIHERGMNED FLLIVLKDLL SRRRDLRLIL
0401: MSATLNAELF SSYFGGAPTI HIPGFTYPVR AHFLEDILER TGYKLTSSNQ LDDYGQDKVW KTQRQLLPRK RKNQITTLVE DALKTSSFET YGSRTRDSLS
0501: NWNPDCIGFN LIEAVLCHIC RKERSGAVLV FMTGWDDISC LKDQLKAHPL LGDPNRVLLL ACHGSMATAE QRLIFEKPPP NVRKIVLATN MAEASITIND
0601: IVFVVDCGKA KETTYDALNN TPCLLPSWIS KASARQRRGR AGRVQPGECY HLYPRCVYDA FADYQLPELL RTPLNSLCLQ IKSLQVGSIG EFLSAALQPP
0701: APLAVQNAVE FLKMIGALDE NENLTDLGRY LSMLPVDPKL GKMLIMGAVF RCIDPILTVV AGLSARDPFL LPQDKRDLAG TAKSRFSAKD YSDHMALVRA
0801: YEGWKDAERE GSAYEYCWRN FLSAQTLQAI HSLRKQFSYI LKDAGLVDSD ANTNNSLSHN QSLVRGIICS GLFPGITSVV HRENSMSFKT MDDGQVLLYA
0901: NSVNAKYQTI PYPWLVFGEK VKVNAVFIRD STGVSDSILI LFGGAVTKGS MAGHLKMLDG YIDLFMDPSL CECYLQLKEE LDKLVQKKLE DPSFDIHKEG
1001: KYILYAAQEL AAGDLCEGRF VFGRETSRAR LSSSDDTKGN IIKDGMNPKS LLQTLLMRAG HTPPKYKTKH LKTNEFRAIV EFKGMQFAGK PKRNKQLAER
1101: DAAIEALGWL TQTSGTKLQD DGDDSPLDLT DNMLKLLSRP RRRSRNNSRK

Best Arabidopsis Sequence Match ( AT5G04895.1 )
(BLAST)

0001: MRFTKRISLF LGQTTRIHSR SLLGNPTLCR SYIVGPVSTS SPAFLISSRN GDGVTGLYYP IRRRFIGHTA EQFSDDEYEC EFEEHKASSS VANVDEWKWK
0101: LGILLANDSE QEIVSRDKRD RRDYEQISNL AKRMGLYSEI YGKVVVASKV PLPNYRPDLD DKRPQREVVL PLSLQRRVEG LLQEHLDSQQ LSSGKANECV
0201: ADSQPPKQTE ELPDENSDSF LDGSVMEKVL QRRSMRMRNM QRTWQESPEG RTMLEFRKTL PSFKDKERLL QAIARNQVIV VSGETGCGKT TQLPQYILES
0301: EIESGRGAFC NIICTQPRRI SAMAVSERVS AERGEPLGET VGFKVRLEGM RGKNTHLLFC TSGILLRRLL SDRNLNGVTH VFVDEIHERG MNEDFLIIVL
0401: KELLPRRPDL RLVLMSATLN AELFSNYYGG APTIHIPGFT HPVKAHFLED VLEITGYKLT SFNQVDDYGQ EKTWKTQKQL MPRKRKNQIT TLVEEALSKS
0501: NFESYNSRTR DSLSSWMPDC IGFNLIEAVL CHICRKERPG AVLVFLTGWD DIRSLSDQIK AHPLLGDPNR VLLLMCHGSM ATAEQRLIFE RAPPNIRKIV
0601: LATNMAEASI TINDVVFVVD CGKAKETTYD ALNNTPCLLP SWISQASARQ RRGRAGRLFP GECYHLYPKC VYDAFAEYQL PELLRTPLNS LCLQIKSLQV
0701: ESIAEFLSAA LQAPESLAVQ NAIGFLKMIG ALDEKENLTD LGKLLSILPV DPKLGKMLIM GAIFRCFDPI LTIVSGLSVR DPFLLPQDKK DLALSAKLRF
0801: SAKDYSDHMA LVRAFEGWKD AEREGSAYEF CWRNFLSAQT LQAIHSLRKQ FNYILKEAGL VHDDLALNNK LSHNQSLVRA VICSGLFPGI ASVVHRETSM
0901: SFKTMDDGQV SLYANSVNSR FPTIPYPWLV FGEKVKVNAV LIRDSTGVPD SSLILFGGSL STGVQVGHLK MLDGYIDFFM DPNLAESYVK LKEELDKLLQ
1001: KKLEDPSMDI HKEGKYLMLA VQELVAGDQC EGRFVFGRDT KRPSQPQIGE NKHSKDGTNP KSLLQTLLMR AGHSPPKYKT KHLKTNEFRA LVEFKGMQFV
1101: GKPQRNKTLA EKDAAVEALA WLTHTSDNST GQHNEDADSP PDVTDNMLKL LGGRRRRSKG K

Arabidopsis Description

ATP-dependent RNA helicase A-like protein [Source:UniProtKB/TrEMBL;Acc:Q9FF84]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.