CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44757	Soybean	plastid	83.64	30.84
GSMUA_Achr4P07530_001	Banana	mitochondrion	68.22	25.06
Os03t0748800-01	Rice	mitochondrion	66.59	24.78
TraesCS5D01G397600.1	Wheat	nucleus	65.65	24.43
TraesCS5B01G392800.1	Wheat	nucleus	65.65	24.43
TraesCS5A01G387700.2	Wheat	golgi, nucleus	65.65	24.33
HORVU5Hr1G094990.5	Barley	endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	64.95	24.17
KXG37551	Sorghum	nucleus, vacuole	64.95	24.13
Zm00001d034013_P002	Maize	golgi, mitochondrion, vacuole	64.72	23.1
KRH41772	Soybean	plastid	54.44	19.8
KRH60477	Soybean	plastid	54.44	19.75
KRH38164	Soybean	nucleus	50.47	19.6
KRG90929	Soybean	plastid	50.93	19.14
KRH72171	Soybean	nucleus	34.58	16.44
KRH32860	Soybean	mitochondrion, nucleus, plastid	36.68	15.24
KRH21325	Soybean	nucleus	18.46	11.86
KRH12910	Soybean	cytosol, nucleus	20.56	11.81
KRH69191	Soybean	nucleus	19.16	11.36
KRH68290	Soybean	nucleus	18.69	11.11
KRG96553	Soybean	nucleus	18.46	10.96
KRH75071	Soybean	nucleus	17.29	10.5
KRH70930	Soybean	nucleus	17.29	10.5
KRG97372	Soybean	nucleus	22.9	10.13
KRH54662	Soybean	nucleus	24.53	10.04
KRH58751	Soybean	nucleus	15.89	9.76
KRH31768	Soybean	cytosol, nucleus	12.62	9.36
KRH05918	Soybean	nucleus	26.17	9.36
KRH14525	Soybean	nucleus	25.23	9.28
KRH17401	Soybean	nucleus	25.93	9.23
KRH73592	Soybean	nucleus	24.77	9.12
KRH74752	Soybean	nucleus	21.73	9.01
KRH10165	Soybean	nucleus	25.47	8.57
KRH23170	Soybean	nucleus	25.23	8.5
KRH01863	Soybean	nucleus	28.5	8.48
KRH76262	Soybean	nucleus	21.5	6.96
KRH65271	Soybean	nucleus	21.26	6.88
KRH31333	Soybean	nucleus, plastid	20.33	5.01
KRG97543	Soybean	nucleus, plastid	19.63	4.86
KRH40933	Soybean	cytosol	4.21	2.96
KRH69386	Soybean	cytosol	0.7	1.14

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02009539	ncoils:Coil	EnsemblPlantsGene:GLYMA_15G216100	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004004	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139	GO:GO:0006396	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	InterPro:Helicase_ATP-bd	InterPro:IPR014001	UniProt:K7MCW6
EnsemblPlants:KRH13104	ProteinID:KRH13104	ProteinID:KRH13104.1	InterPro:P-loop_NTPase	PFscan:PS51192	PANTHER:PTHR18934
PANTHER:PTHR18934:SF103	SMART:SM00487	SUPFAM:SSF52540	UniParc:UPI000294A209	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:-:35382999..35392983

Molecular Weight (calculated)

48680.6 Da

IEP (calculated)

7.338

GRAVY (calculated)

-0.325

Length

428 amino acids

Sequence
(BLAST)

001: MNGTLTFTLK GLLLCRRDFY CAEGSSLVVP CRSLQCVFHP WLSSLCNAKS LITTRLFSSY YSLEQFSDDE YDCDFENQQA SSTVANVDDW KWKLSMLLRS
101: KNDQEIVSRD IGHLFGKVVV ASKVPLPNYC PDLDDKRPQR EEYLDRLQLN SAKTTDSLDD LNSTNQVKDI DMDENADSFV DESVMEKVLQ KRSLRMRNMQ
201: RAWQESPEGR KMLEFRKSLP SFKEKQGLLE AIAHNQVIVV SGEAGCGKIT QLPQYVLESE IESGRGAFCS IICTQPRRIS VMAVAERVSA ERGEPLGETV
301: GFEVRLEGMK GKNTHLLFCT SGILLRRLLS DRNPNGITHV FVDEIHERGM NEDFLLIVLK DLLPRCRDLR LVLMSATLNA ELFSNYFGGA PTFHIPKLWK
401: TQKQLAPRKR KNQIAALVEV CSYLKNLT

Best Arabidopsis Sequence Match ( AT1G48650.1 )
(BLAST)

0001: MQLYSAIFRG HIRPNAVVGA ASMFIQHNSI QLHRSPKLLL RPSSVVRSLH CRRSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL PYFQRQNSGY
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKSKNHA KASTKWG

Arabidopsis Description

DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.