Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 94.89 | 82.91 |
| GSMUA_Achr8P12550_001 | Banana | cytosol | 41.22 | 81.54 |
| Zm00001d045376_P001 | Maize | cytosol | 29.67 | 80.91 |
| PGSC0003DMT400055058 | Potato | nucleus | 75.22 | 79.27 |
| Zm00001d019056_P001 | Maize | nucleus | 15.78 | 71.0 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 74.22 | 70.69 |
| VIT_08s0032g01230.t01 | Wine grape | nucleus, plastid | 79.78 | 70.05 |
| Solyc01g006970.2.1 | Tomato | nucleus | 78.67 | 68.67 |
| Bra023043.1-P | Field mustard | nucleus | 75.78 | 68.54 |
| AT2G35920.3 | Thale cress | plastid | 76.11 | 66.7 |
| Os10t0471350-01 | Rice | nucleus | 73.67 | 66.43 |
| CDX79642 | Canola | nucleus, vacuole | 75.56 | 65.7 |
| CDX84588 | Canola | plastid, vacuole | 75.56 | 65.7 |
| TraesCS1D01G148100.2 | Wheat | nucleus | 74.22 | 64.92 |
| TraesCS1A01G151100.1 | Wheat | nucleus | 74.22 | 64.92 |
| Zm00001d032735_P001 | Maize | plastid | 74.44 | 64.8 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 74.11 | 64.69 |
| KXG38358 | Sorghum | nucleus | 74.0 | 64.29 |
| GSMUA_Achr8P12540_001 | Banana | nucleus | 30.11 | 49.09 |
| KRH38164 | Soybean | nucleus | 46.33 | 37.84 |
| KRH44757 | Soybean | plastid | 48.44 | 37.55 |
| KRH41772 | Soybean | plastid | 48.22 | 36.87 |
| KRG90929 | Soybean | plastid | 46.11 | 36.44 |
| KRH60477 | Soybean | plastid | 47.67 | 36.36 |
| KRH13104 | Soybean | mitochondrion | 16.44 | 34.58 |
| KRH69191 | Soybean | nucleus | 27.11 | 33.8 |
| KRH68290 | Soybean | nucleus | 26.67 | 33.33 |
| KRH31768 | Soybean | cytosol, nucleus | 21.33 | 33.28 |
| KRG96553 | Soybean | nucleus | 26.56 | 33.15 |
| KRH58751 | Soybean | nucleus | 25.22 | 32.57 |
| KRH21325 | Soybean | nucleus | 22.89 | 30.93 |
| KRH75071 | Soybean | nucleus | 23.44 | 29.93 |
| KRH70930 | Soybean | nucleus | 23.33 | 29.79 |
| KRH12910 | Soybean | cytosol, nucleus | 24.33 | 29.4 |
| KRH14525 | Soybean | nucleus | 35.56 | 27.49 |
| KRH73592 | Soybean | nucleus | 35.22 | 27.28 |
| KRH69386 | Soybean | cytosol | 7.89 | 27.0 |
| KRG97372 | Soybean | nucleus | 28.11 | 26.16 |
| KRH54662 | Soybean | nucleus | 27.67 | 23.8 |
| KRH01863 | Soybean | nucleus | 38.0 | 23.78 |
| KRH74752 | Soybean | nucleus | 27.22 | 23.74 |
| KRH40933 | Soybean | cytosol | 15.44 | 22.82 |
| KRH05918 | Soybean | nucleus | 28.78 | 21.64 |
| KRH17401 | Soybean | nucleus | 28.78 | 21.53 |
| KRH23170 | Soybean | nucleus | 26.78 | 18.96 |
| KRH10165 | Soybean | nucleus | 26.56 | 18.79 |
| KRH76262 | Soybean | nucleus | 23.67 | 16.12 |
| KRH65271 | Soybean | nucleus | 23.44 | 15.96 |
| KRG97543 | Soybean | nucleus, plastid | 22.67 | 11.8 |
| KRH31333 | Soybean | nucleus, plastid | 22.11 | 11.46 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0R0L5D3 | EMBL:ACUP02001175 | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_02G1955001 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006139 |
| GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:Helicase-assoc_dom |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlants:KRH72171 | ProteinID:KRH72171 |
| ProteinID:KRH72171.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF191 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI0006EDBC8F | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr2:+:36886815..36893752
Molecular Weight (calculated)
100417.0 Da
IEP (calculated)
7.751
GRAVY (calculated)
-0.200
Length
900 amino acids
Sequence
(BLAST)
(BLAST)
001: SHAYSKGKVL IVSKVPLPDY RADLDERHGS TQKEVENVLT MLSFWQIKMS TDIERRVGNL LNSSQSTGAT LSSLPSISAD LGQKQSAAPI KYVSSRQTDS
101: SKEKLSVALK ERQELVQASD SLKEMKSFRE KLPAFKMKSE FLKAVQENQV LVVSGETGCG KTTQLPQFLL EEEISCLRGA DCNIICTQPR RVSAISVAAR
201: ISAERGESLG EAVGYQIRLE SKRSAETRLL FCTTGVLLRQ LVQDPDLTGV SHLLVDEIHE RGMNEDFLII ILRDLLPRRP DLRLILMSAT INADMFSKYF
301: ANAPTMHIPG FTYPVAEHFL EDVLEKTRYS IKSDFDNFEG NSRRRRKQQD SKKDPLTEMF EDIDVDTNYK NYSLGVRKSL EAWSGSQIDL GLVEATIEYI
401: CRNEAGGAIL VFLTGWDEIS KLLDKLKGNN LVGDPSKFLI LPLHGSMPTV NQCEIFERPP PNKRKIVLAT NIAESSITID DVVYVIDWGK AKETSYDALN
501: KLACLLPSWI SKASAHQRRG RAGRVQPGVC YRLYPKLIHD AMPQYQLAEI LRTPLQELCL HIKSLQLGTV GSFLEKALQP PDPLAVKNAI ELLKTIGALD
601: EQEELTPLGQ HLCNIPLDPN IGKMLLMGSI FQCLNPALTI AASLAYRNPF VLPINRKEEA DAAKQFFAGD SCSDHIALLK AFEGWKEAKR SGNEKQFCWD
701: NFLSPATLRL IDNMRMQFLN LLSDIGFVDK SRGANVYNQY SHDLEMVCAI LCAGLYPNVV QCKRRGKRTA FYTKEVGKVD IHPASVNAGI YLFPLPYMVY
801: SEKVKTTSIY IKDSTNISDY ALLLFGGNLV PSKSGEGIDM LGGYLHFSAS KSVIELIRKL RGELDKLLNR KIEEPGFDVS AEGKGVVAAA VELLHSQVMR
101: SKEKLSVALK ERQELVQASD SLKEMKSFRE KLPAFKMKSE FLKAVQENQV LVVSGETGCG KTTQLPQFLL EEEISCLRGA DCNIICTQPR RVSAISVAAR
201: ISAERGESLG EAVGYQIRLE SKRSAETRLL FCTTGVLLRQ LVQDPDLTGV SHLLVDEIHE RGMNEDFLII ILRDLLPRRP DLRLILMSAT INADMFSKYF
301: ANAPTMHIPG FTYPVAEHFL EDVLEKTRYS IKSDFDNFEG NSRRRRKQQD SKKDPLTEMF EDIDVDTNYK NYSLGVRKSL EAWSGSQIDL GLVEATIEYI
401: CRNEAGGAIL VFLTGWDEIS KLLDKLKGNN LVGDPSKFLI LPLHGSMPTV NQCEIFERPP PNKRKIVLAT NIAESSITID DVVYVIDWGK AKETSYDALN
501: KLACLLPSWI SKASAHQRRG RAGRVQPGVC YRLYPKLIHD AMPQYQLAEI LRTPLQELCL HIKSLQLGTV GSFLEKALQP PDPLAVKNAI ELLKTIGALD
601: EQEELTPLGQ HLCNIPLDPN IGKMLLMGSI FQCLNPALTI AASLAYRNPF VLPINRKEEA DAAKQFFAGD SCSDHIALLK AFEGWKEAKR SGNEKQFCWD
701: NFLSPATLRL IDNMRMQFLN LLSDIGFVDK SRGANVYNQY SHDLEMVCAI LCAGLYPNVV QCKRRGKRTA FYTKEVGKVD IHPASVNAGI YLFPLPYMVY
801: SEKVKTTSIY IKDSTNISDY ALLLFGGNLV PSKSGEGIDM LGGYLHFSAS KSVIELIRKL RGELDKLLNR KIEEPGFDVS AEGKGVVAAA VELLHSQVMR
001: MEVLDENEWW NKIEQWKTGG EQEMLIKRNF SRGDQQTLSD MALQMGLYFH AYNKGKALVV SKVPLPDYRA DLDERHGSTQ KEIKMSTETE RKLGSLLKTT
101: QESGSSGASA SAFNDQQDRT STLGLKRPDS ASKLPDSLEK EKFSFALKER QEKLKATESV KALKAFREKL PAFKMKEEFL NSVSQNQVLV VSGETGCGKT
201: TQLPQFILEE EISSLRGADC NIICTQPRRI SAISVASRIS AERGESIGES VGYQIRLESK RSDQTRLLFC TTGVLLRRLI EDPNLTNVSH LLVDEIHERG
301: MNEDFLLIIL RDLLPRRPDL RLILMSATIN ADMFSTYFGN SPTMHIPGFT FPVAELFLED VLEKSRYNIK SSDSGNYQGS SRGRRRESES KKDDLTTLFE
401: DIDINSHYKS YSSATRNSLE AWSGAQIDVD LVEATIEHIC RLEGGGAILV FLTGWDEISK LLEKINMNNF LGDSSKFLVL PLHGSMPTVN QREIFDRPPP
501: NKRKIVLATN IAESSITIDD VVYVVDCGKA KETSYDALNK VACLLPSWIS KASAHQRRGR AGRVQAGVCY RLYPKVIYDA FPQYQLPEII RTPLQELCLH
601: IKSLQVGSIG SFLAKALQPP DALAVENAIE LLKTIGALND VEELTPLGRH LCTLPVDPNI GKMLLIGAIF QCVNPALTIA AALAYRSPFV LPLNRKEEAD
701: EAKRYFAGDS CSDHIALLKA YEGYRDAKRG GNEKDFCWQN FLSPVTLRMM EDMRNQFLDL LSDIGFVDKS KPNAYNQYSY DMEMISAVLC AGLYPNVVQC
801: KRRGKRTAFY TKELGKVDIH PGSVNARVNL FSLPYLVYSE KVKTTSVYIR DSTNISDYAL LMFGGNLIPS KTGEGIEMLG GYLHFSASKN ILELIQRLRG
901: EVDKLLNKKI EDPSLDITVE GKGVVSAVVE LLRSQKH
101: QESGSSGASA SAFNDQQDRT STLGLKRPDS ASKLPDSLEK EKFSFALKER QEKLKATESV KALKAFREKL PAFKMKEEFL NSVSQNQVLV VSGETGCGKT
201: TQLPQFILEE EISSLRGADC NIICTQPRRI SAISVASRIS AERGESIGES VGYQIRLESK RSDQTRLLFC TTGVLLRRLI EDPNLTNVSH LLVDEIHERG
301: MNEDFLLIIL RDLLPRRPDL RLILMSATIN ADMFSTYFGN SPTMHIPGFT FPVAELFLED VLEKSRYNIK SSDSGNYQGS SRGRRRESES KKDDLTTLFE
401: DIDINSHYKS YSSATRNSLE AWSGAQIDVD LVEATIEHIC RLEGGGAILV FLTGWDEISK LLEKINMNNF LGDSSKFLVL PLHGSMPTVN QREIFDRPPP
501: NKRKIVLATN IAESSITIDD VVYVVDCGKA KETSYDALNK VACLLPSWIS KASAHQRRGR AGRVQAGVCY RLYPKVIYDA FPQYQLPEII RTPLQELCLH
601: IKSLQVGSIG SFLAKALQPP DALAVENAIE LLKTIGALND VEELTPLGRH LCTLPVDPNI GKMLLIGAIF QCVNPALTIA AALAYRSPFV LPLNRKEEAD
701: EAKRYFAGDS CSDHIALLKA YEGYRDAKRG GNEKDFCWQN FLSPVTLRMM EDMRNQFLDL LSDIGFVDKS KPNAYNQYSY DMEMISAVLC AGLYPNVVQC
801: KRRGKRTAFY TKELGKVDIH PGSVNARVNL FSLPYLVYSE KVKTTSVYIR DSTNISDYAL LMFGGNLIPS KTGEGIEMLG GYLHFSASKN ILELIQRLRG
901: EVDKLLNKKI EDPSLDITVE GKGVVSAVVE LLRSQKH
Arabidopsis Description
RNA helicase family protein [Source:TAIR;Acc:AT2G35920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.