Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38164 | Soybean | nucleus | 75.86 | 78.4 |
| VIT_01s0011g04360.t01 | Wine grape | plastid | 78.23 | 75.44 |
| Solyc04g007510.2.1 | Tomato | plastid | 73.13 | 72.18 |
| KRH41772 | Soybean | plastid | 66.46 | 64.32 |
| KRH60477 | Soybean | plastid | 66.55 | 64.24 |
| KRH44757 | Soybean | plastid | 59.17 | 58.05 |
| KRH13104 | Soybean | mitochondrion | 19.14 | 50.93 |
| KRH72171 | Soybean | nucleus | 36.44 | 46.11 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 38.02 | 42.04 |
| KRH31768 | Soybean | cytosol, nucleus | 16.94 | 33.45 |
| KRH68290 | Soybean | nucleus | 21.07 | 33.33 |
| KRG96553 | Soybean | nucleus | 20.98 | 33.15 |
| KRH69191 | Soybean | nucleus | 20.9 | 32.96 |
| KRH58751 | Soybean | nucleus | 19.49 | 31.85 |
| KRH21325 | Soybean | nucleus | 18.26 | 31.23 |
| KRH70930 | Soybean | nucleus | 19.14 | 30.92 |
| KRH75071 | Soybean | nucleus | 18.88 | 30.5 |
| KRH73592 | Soybean | nucleus | 28.53 | 27.97 |
| KRH14525 | Soybean | nucleus | 28.53 | 27.92 |
| KRH12910 | Soybean | cytosol, nucleus | 18.26 | 27.92 |
| KRH69386 | Soybean | cytosol | 5.97 | 25.86 |
| KRG97372 | Soybean | nucleus | 20.63 | 24.3 |
| KRH01863 | Soybean | nucleus | 30.55 | 24.2 |
| KRH54662 | Soybean | nucleus | 21.6 | 23.52 |
| KRH74752 | Soybean | nucleus | 20.81 | 22.97 |
| KRH40933 | Soybean | cytosol | 11.94 | 22.33 |
| KRH05918 | Soybean | nucleus | 21.33 | 20.3 |
| KRH17401 | Soybean | nucleus | 21.42 | 20.28 |
| KRH23170 | Soybean | nucleus | 21.07 | 18.88 |
| KRH10165 | Soybean | nucleus | 20.98 | 18.79 |
| KRH76262 | Soybean | nucleus | 19.23 | 16.58 |
| KRH65271 | Soybean | nucleus | 19.05 | 16.41 |
| KRG97543 | Soybean | nucleus, plastid | 20.81 | 13.71 |
| KRH31333 | Soybean | nucleus, plastid | 20.54 | 13.48 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02012653 | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_20G122600 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| UniProt:I1NFR4 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014720 | EnsemblPlants:KRG90929 | ProteinID:KRG90929 |
| ProteinID:KRG90929.1 | InterPro:P-loop_NTPase | PFAM:PF00035 | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 |
| PFAM:PF07717 | PFscan:PS50137 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF146 |
| SMART:SM00358 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| UniParc:UPI0002965A6D | InterPro:dsRBD_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr20:-:36526857..36544827
Molecular Weight (calculated)
128832.0 Da
IEP (calculated)
7.391
GRAVY (calculated)
-0.290
Length
1139 amino acids
Sequence
(BLAST)
(BLAST)
0001: APRQFQQLSL SCSRQTHENP TPAVVTTLQP SFTEQLPDKQ RSRFVSSYDD TVSEEGSDRE FQPPSLPNAS PIDNTDEWKR KFTMLLRDKS KQELVSREKK
0101: DRRDFDRIAV LASRMGLYSH MYAKVVVFSK VPLPNYRYDL DDRRPQREVS LSITMYTQVN VYFEEYLGQK SRMNKSFSDL SSARSSSNGS IGTDEGLFEL
0201: PEPLASSNAY MEKILRQRSL QMRDQQQAWQ ESPEGRRMLE FRRSLPAYKK KEAILSVISR NQVVIISGET GCGKTTQIPQ FILESEVESV CGAACNIICT
0301: QPRRISAMSV SERVASERGE KLGESVGYKV RLEGMKGRDT HLLFCTTGIL LRRLLADRKL KGVTHVIVDE IHERGMNEDF LLIILKELLP HRPELKLILM
0401: SATLDAELFS SYFNGAPIMF IPGFTYPVRT HFLENILEMT GYRLTPYNQI DDYGQERMWK MNKHAPRKRK SQIASAVEDA IMAADFKDYS LQTQESLSCW
0501: NPDCIGFSLI EYILCNICEN ERPGAVLVFM TGWDDISSLK EKLLTHTVLG DANRVLLLTC HGSMASSEQR LIFEEPEDGV RKIVLTTNIA ETSITINDVV
0601: FVLDCGKAKE TSYDALNNTP CLLPTWISKV SAKQRRGRAG RVQPGECYHL YPRCVYDAFA EYQLPEILRT PLQSLCLQIK SLRLGSISEF LSRALQSPET
0701: LVVQNAIEYL KIIGALDEDE NLTILGRCLT MLPMEPKLGK MLILGAIFNC LDPILTVVAG LSVRDPFLTP LDKRDLAEEA KSQFCGAYSD HLALVRAYEG
0801: WRDAEMDLGG YEYCWKNFLS SQSMKAIDAL RREFICLVKD IGLVDSNTAS CNEWSSDVNL IRAIICYGLY PGICSVVHNE KSFSLKTMED GQVLLYSNSV
0901: NAQETKIPYP WLVFNEKIKV NSVFLRDSTA VSDSVVLLFG GSLLKGDTDN HLKMLGGYLE FFMEPSVAEM YQSIRRELDD FIQSKLLFPR MATQWCHDLI
1001: SAVRLLISND KCEGRFVFGR QVLKPSKKSI VMASHPTLVS RTESGPGGDN SKSQLQTLLT RAGYAAPIYM TKQLKNNQFQ ATVEFNGMQI MGQPCNNKKS
1101: AEKDAAAEAL QWLMGGKQTG KEYINHVSML LKKSKKDHN
0101: DRRDFDRIAV LASRMGLYSH MYAKVVVFSK VPLPNYRYDL DDRRPQREVS LSITMYTQVN VYFEEYLGQK SRMNKSFSDL SSARSSSNGS IGTDEGLFEL
0201: PEPLASSNAY MEKILRQRSL QMRDQQQAWQ ESPEGRRMLE FRRSLPAYKK KEAILSVISR NQVVIISGET GCGKTTQIPQ FILESEVESV CGAACNIICT
0301: QPRRISAMSV SERVASERGE KLGESVGYKV RLEGMKGRDT HLLFCTTGIL LRRLLADRKL KGVTHVIVDE IHERGMNEDF LLIILKELLP HRPELKLILM
0401: SATLDAELFS SYFNGAPIMF IPGFTYPVRT HFLENILEMT GYRLTPYNQI DDYGQERMWK MNKHAPRKRK SQIASAVEDA IMAADFKDYS LQTQESLSCW
0501: NPDCIGFSLI EYILCNICEN ERPGAVLVFM TGWDDISSLK EKLLTHTVLG DANRVLLLTC HGSMASSEQR LIFEEPEDGV RKIVLTTNIA ETSITINDVV
0601: FVLDCGKAKE TSYDALNNTP CLLPTWISKV SAKQRRGRAG RVQPGECYHL YPRCVYDAFA EYQLPEILRT PLQSLCLQIK SLRLGSISEF LSRALQSPET
0701: LVVQNAIEYL KIIGALDEDE NLTILGRCLT MLPMEPKLGK MLILGAIFNC LDPILTVVAG LSVRDPFLTP LDKRDLAEEA KSQFCGAYSD HLALVRAYEG
0801: WRDAEMDLGG YEYCWKNFLS SQSMKAIDAL RREFICLVKD IGLVDSNTAS CNEWSSDVNL IRAIICYGLY PGICSVVHNE KSFSLKTMED GQVLLYSNSV
0901: NAQETKIPYP WLVFNEKIKV NSVFLRDSTA VSDSVVLLFG GSLLKGDTDN HLKMLGGYLE FFMEPSVAEM YQSIRRELDD FIQSKLLFPR MATQWCHDLI
1001: SAVRLLISND KCEGRFVFGR QVLKPSKKSI VMASHPTLVS RTESGPGGDN SKSQLQTLLT RAGYAAPIYM TKQLKNNQFQ ATVEFNGMQI MGQPCNNKKS
1101: AEKDAAAEAL QWLMGGKQTG KEYINHVSML LKKSKKDHN
0001: MTNRLPPSLY VPPHQRLGSD YGFNPVPLSP VRYVSAYDDR VSEDRQPQEG TFHCADLDDW NKRFSMLLKD SLKQEVISRE KKDRRDFDKL AALATTLGLY
0101: SHAYAKVVVF SKIPLPNYRF DLDDKKPQRE VNLHTDLLQR VEAYLTEYLS KSSNRIDRVP ANSVSRTSSI SSTDEWFSEQ PLPISATKIL WQRSLQLRDR
0201: QQYWQASVEG QRMLDSRTSL PAFKQRHSVL TAISQNQVIV ISGETGCGKT TQIPQFILES EIEANRGAFS SIICTQPRRI SAMSVSERVA YERGEQLGES
0301: VGYKVRLEGV KGRDTRLLFC TTGILLRRLL VDRNLRGVTH VIVDEIHERG MNEDFLLIIL KDLLSRRSEL KLILMSATLD AELFSSYFGG AGVIYIPGFT
0401: YPVRSHFLED ILEMTRYRLT PYNQIDDYGQ ERTWKMNKQI PKKRKSQITF VVEDALRAAD FKEFSPETRE SLSCWYPDCI GFNLIEFLLC NICENEGPGG
0501: ILIFLTGWDD ISSLKEKLQI HPIFGNPDLV MLLACHGSME TFEQRLIFEE PASGVRKIVL ATNIAETSIT INDVAFVIDC GKAKETSYDA LNNTPCLLPS
0601: WISKVSAQQR RGRAGRVRPG QCYHLYPKCV YDAFAEYQLP EILRTPLHSL CLQIKSLNLG SISEFLSRAL QSPELLAVQK AIAFLKIIGA LDENEDLTTL
0701: GRYLSKLPME PKLGKMLILG AILGCLDPIL TVAAGLSVRD PFLTPQDKKD LAEAAKSQFS RDHSDHLALV RAYEGWKKAE EESAVYDYCW KNFLSIQSLR
0801: AIDSLRKEFF SLLKDTGLID GNPSICNSEG NDANLTRAVI CYGMYPGICS VVHNERSFSL KTMEDGQVLL YSNSENARET KIPYPWLVFN EKIKVNSVFL
0901: RDSTACSDST LILFGGSISK GDTDGHLKML GGYLEFFMKP DVAEIYQTLK KELDELIQNK LLNPKVDMQA HRELLSAIRL LVSEDGCDGR FVFGHQILRP
1001: LEISALSTKP SLFSRTESGP GGDNSKSQLQ TILTRAGYTV PMYKTKQLKN NKFQTTVEFN ETQIMGQPCS NKKSAEKDAA AEAIQWLKGG AKESHEQVNH
1101: MSKLLKKGKK DHL
0101: SHAYAKVVVF SKIPLPNYRF DLDDKKPQRE VNLHTDLLQR VEAYLTEYLS KSSNRIDRVP ANSVSRTSSI SSTDEWFSEQ PLPISATKIL WQRSLQLRDR
0201: QQYWQASVEG QRMLDSRTSL PAFKQRHSVL TAISQNQVIV ISGETGCGKT TQIPQFILES EIEANRGAFS SIICTQPRRI SAMSVSERVA YERGEQLGES
0301: VGYKVRLEGV KGRDTRLLFC TTGILLRRLL VDRNLRGVTH VIVDEIHERG MNEDFLLIIL KDLLSRRSEL KLILMSATLD AELFSSYFGG AGVIYIPGFT
0401: YPVRSHFLED ILEMTRYRLT PYNQIDDYGQ ERTWKMNKQI PKKRKSQITF VVEDALRAAD FKEFSPETRE SLSCWYPDCI GFNLIEFLLC NICENEGPGG
0501: ILIFLTGWDD ISSLKEKLQI HPIFGNPDLV MLLACHGSME TFEQRLIFEE PASGVRKIVL ATNIAETSIT INDVAFVIDC GKAKETSYDA LNNTPCLLPS
0601: WISKVSAQQR RGRAGRVRPG QCYHLYPKCV YDAFAEYQLP EILRTPLHSL CLQIKSLNLG SISEFLSRAL QSPELLAVQK AIAFLKIIGA LDENEDLTTL
0701: GRYLSKLPME PKLGKMLILG AILGCLDPIL TVAAGLSVRD PFLTPQDKKD LAEAAKSQFS RDHSDHLALV RAYEGWKKAE EESAVYDYCW KNFLSIQSLR
0801: AIDSLRKEFF SLLKDTGLID GNPSICNSEG NDANLTRAVI CYGMYPGICS VVHNERSFSL KTMEDGQVLL YSNSENARET KIPYPWLVFN EKIKVNSVFL
0901: RDSTACSDST LILFGGSISK GDTDGHLKML GGYLEFFMKP DVAEIYQTLK KELDELIQNK LLNPKVDMQA HRELLSAIRL LVSEDGCDGR FVFGHQILRP
1001: LEISALSTKP SLFSRTESGP GGDNSKSQLQ TILTRAGYTV PMYKTKQLKN NKFQTTVEFN ETQIMGQPCS NKKSAEKDAA AEAIQWLKGG AKESHEQVNH
1101: MSKLLKKGKK DHL
Arabidopsis Description
DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4IM84]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.