Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH65271 | Soybean | nucleus | 95.0 | 94.93 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 61.24 | 61.24 |
| PGSC0003DMT400000297 | Potato | nucleus | 55.03 | 54.42 |
| Solyc01g095710.2.1 | Tomato | nucleus | 54.96 | 54.14 |
| GSMUA_Achr3P08220_001 | Banana | nucleus | 43.98 | 54.05 |
| AT1G33390.2 | Thale cress | nucleus | 49.66 | 53.03 |
| CDY48353 | Canola | nucleus | 47.09 | 50.86 |
| Os02t0736600-01 | Rice | nucleus | 48.68 | 50.55 |
| CDY34159 | Canola | nucleus | 47.31 | 50.53 |
| Bra032998.1-P | Field mustard | nucleus | 46.93 | 50.12 |
| KXG30805 | Sorghum | nucleus | 47.62 | 49.29 |
| Zm00001d017967_P003 | Maize | nucleus | 47.16 | 48.71 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 47.24 | 48.48 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 47.09 | 48.37 |
| TraesCS6A01G178200.1 | Wheat | nucleus | 44.44 | 47.76 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 46.86 | 46.93 |
| TraesCS6A01G299400.2 | Wheat | nucleus | 47.01 | 46.83 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 46.93 | 46.76 |
| KRH69191 | Soybean | nucleus | 19.0 | 34.76 |
| KRH68290 | Soybean | nucleus | 18.93 | 34.72 |
| KRG96553 | Soybean | nucleus | 18.77 | 34.4 |
| KRH58751 | Soybean | nucleus | 17.79 | 33.72 |
| KRH31768 | Soybean | cytosol, nucleus | 14.46 | 33.1 |
| KRH75071 | Soybean | nucleus | 17.26 | 32.34 |
| KRH21325 | Soybean | nucleus | 16.28 | 32.28 |
| KRH70930 | Soybean | nucleus | 17.18 | 32.2 |
| KRH12910 | Soybean | cytosol, nucleus | 16.58 | 29.4 |
| KRG97372 | Soybean | nucleus | 20.59 | 28.13 |
| KRH69386 | Soybean | cytosol | 5.37 | 27.0 |
| KRH54662 | Soybean | nucleus | 21.12 | 26.67 |
| KRH40933 | Soybean | cytosol | 12.26 | 26.6 |
| KRH74752 | Soybean | nucleus | 20.44 | 26.16 |
| KRH72171 | Soybean | nucleus | 16.12 | 23.67 |
| KRH05918 | Soybean | nucleus | 21.12 | 23.31 |
| KRH17401 | Soybean | nucleus | 21.12 | 23.19 |
| KRH23170 | Soybean | nucleus | 20.97 | 21.79 |
| KRH10165 | Soybean | nucleus | 20.82 | 21.62 |
| KRH13104 | Soybean | mitochondrion | 6.96 | 21.5 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 16.28 | 20.87 |
| KRH38164 | Soybean | nucleus | 16.96 | 20.33 |
| KRG90929 | Soybean | plastid | 16.58 | 19.23 |
| KRH44757 | Soybean | plastid | 16.88 | 19.21 |
| KRH41772 | Soybean | plastid | 16.81 | 18.86 |
| KRH60477 | Soybean | plastid | 16.65 | 18.64 |
| KRH14525 | Soybean | nucleus | 15.29 | 17.35 |
| KRH73592 | Soybean | nucleus | 15.14 | 17.21 |
| KRH01863 | Soybean | nucleus | 15.9 | 14.6 |
| KRG97543 | Soybean | nucleus, plastid | 17.49 | 13.36 |
| KRH31333 | Soybean | nucleus, plastid | 17.49 | 13.31 |
| Os02t0736800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.120.1080 | EntrezGene:100788201 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02000594 | ncoils:Coil |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_01G142700 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:Helicase-assoc_dom |
| InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1J7X3 | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlants:KRH76262 |
| ProteinID:KRH76262 | ProteinID:KRH76262.1 | ProteinID:KRH76263.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 |
| PANTHER:PTHR18934:SF99 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI0002968A71 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:47607504..47616691
Molecular Weight (calculated)
149429.0 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.545
Length
1321 amino acids
Sequence
(BLAST)
(BLAST)
0001: METWECSGDQ IEFNSQSLGN SDSNALILPA KRVRKRKGKE QENGKVKSNK KQKLSKPQKR KMKKLEDDKE KQLLLEKAIK TLNENTLPEY AYPLLLSSCN
0101: INRDETMKEK RRRAVHLLKE GLEVSYDGLS KKPETDEIHL EHADEVEENE IQIQPIRSEE VLNTTSVSLE SSQEPVHGNE VENYKYVSEH PADISIDKHL
0201: DEIRSSTMSC STDEIKSTKS KDRTDENHNS NELSNLSDYS APRWSNVPTV VHVYRPTEVE DKRKDLPIVM MEQEIMEAIN DRSSVIICGE TGCGKTTQVP
0301: QFLYEAGYGS SKGIIGVTQP RRVAVLATAK RVAYELGLRL GKEVGFQVRY DKKIGESCSI KFMTDGILLR EVQNDILLRR YSVLILDEAH ERSLNTDILI
0401: GMLSRVIKTR QMIYYEQKKM ILSGESVSPE KMIFPLKLVL MSATLRVQDF TSGKLFHTTP PVIEVPTRQF PVTAYFAKKT EKTDYIGEAY KKVLAIHKRL
0501: PPGGILVFVT GQREVEDLCR KLRKASREFI KKKVEGSVET DSTVVHETNS VEGVNINEIN EAFEVHGSSS IQQTDRFSGY DEDEDDVNWN ESEFSYDSET
0601: DSELEFDEDD DNLELSENRS NIVDVLGQAG SLASLKAAFE KLSGQATLSS SNGEETSVNI EGNLDQSKVF REKRAKENCS TPGALCVLPL YAMLPAAAQL
0701: RVFEEVGDGE RLVVVATNVA ETSLTIPGIK YVVDTGREKV KNYDPSNGME TYEVQWISKA SAAQRAGRSG RTGPGHCYRL YSSAAFSNEF PEHSPAEVEK
0801: VPVHGVVLLL KSMHIKKVAN FPFPTSLKDS SLLEAENCLK ALEALDNKDE LTLLGKAMAH YPLSPRHSRM LLTVIKNTRH EHKCNPNMLL AYAVAAAAAL
0901: SLSNPFVMQY EDDSSRDLEM VEKSSLGDGE KGIGKKEKSR KKKLKETAKV AREKFRVVTS DALTIAYALQ CFEHSEKSAE FCDDNALHFK TMDEMSKLRQ
1001: QLLKLVFYQS DKGGFEEEYS WIHGSLEDVE RAWQASSEKY PLSLVEERLI CQAICAGWAD RVAKRITASS RASDGEKTSH ALKYQSSMVD ESVFLHRWSS
1101: ASIVGPEFLV YNELLETKRP NKEGITSAKR AYMHGVTSVE PAWLVENAKS SCIFSPPLTD PRPYYDARTD QVKCWVIPTF GRFCWELPKH SLPISNDEHQ
1201: VQVFAYALLE GQVCPCLKSV RKYMSAPPES IMKREAFGQK RVGNLLSKLK SRLIDSSAML RMVWKENPRE LFSEILDWFQ QSFHKHFEEL WLQMLNEVLM
1301: EKQESPLHKS SKKKKGKYKP L
0101: INRDETMKEK RRRAVHLLKE GLEVSYDGLS KKPETDEIHL EHADEVEENE IQIQPIRSEE VLNTTSVSLE SSQEPVHGNE VENYKYVSEH PADISIDKHL
0201: DEIRSSTMSC STDEIKSTKS KDRTDENHNS NELSNLSDYS APRWSNVPTV VHVYRPTEVE DKRKDLPIVM MEQEIMEAIN DRSSVIICGE TGCGKTTQVP
0301: QFLYEAGYGS SKGIIGVTQP RRVAVLATAK RVAYELGLRL GKEVGFQVRY DKKIGESCSI KFMTDGILLR EVQNDILLRR YSVLILDEAH ERSLNTDILI
0401: GMLSRVIKTR QMIYYEQKKM ILSGESVSPE KMIFPLKLVL MSATLRVQDF TSGKLFHTTP PVIEVPTRQF PVTAYFAKKT EKTDYIGEAY KKVLAIHKRL
0501: PPGGILVFVT GQREVEDLCR KLRKASREFI KKKVEGSVET DSTVVHETNS VEGVNINEIN EAFEVHGSSS IQQTDRFSGY DEDEDDVNWN ESEFSYDSET
0601: DSELEFDEDD DNLELSENRS NIVDVLGQAG SLASLKAAFE KLSGQATLSS SNGEETSVNI EGNLDQSKVF REKRAKENCS TPGALCVLPL YAMLPAAAQL
0701: RVFEEVGDGE RLVVVATNVA ETSLTIPGIK YVVDTGREKV KNYDPSNGME TYEVQWISKA SAAQRAGRSG RTGPGHCYRL YSSAAFSNEF PEHSPAEVEK
0801: VPVHGVVLLL KSMHIKKVAN FPFPTSLKDS SLLEAENCLK ALEALDNKDE LTLLGKAMAH YPLSPRHSRM LLTVIKNTRH EHKCNPNMLL AYAVAAAAAL
0901: SLSNPFVMQY EDDSSRDLEM VEKSSLGDGE KGIGKKEKSR KKKLKETAKV AREKFRVVTS DALTIAYALQ CFEHSEKSAE FCDDNALHFK TMDEMSKLRQ
1001: QLLKLVFYQS DKGGFEEEYS WIHGSLEDVE RAWQASSEKY PLSLVEERLI CQAICAGWAD RVAKRITASS RASDGEKTSH ALKYQSSMVD ESVFLHRWSS
1101: ASIVGPEFLV YNELLETKRP NKEGITSAKR AYMHGVTSVE PAWLVENAKS SCIFSPPLTD PRPYYDARTD QVKCWVIPTF GRFCWELPKH SLPISNDEHQ
1201: VQVFAYALLE GQVCPCLKSV RKYMSAPPES IMKREAFGQK RVGNLLSKLK SRLIDSSAML RMVWKENPRE LFSEILDWFQ QSFHKHFEEL WLQMLNEVLM
1301: EKQESPLHKS SKKKKGKYKP L
0001: MASVVGDDCN LDVMPPRKKK NKGSNKMQDK LNSNNNTGSK KSRKRKLNSN VNTVACKSQK RKLKKLEEDK EKEILFSKTA ELLDKYKISE DVSSLLQSSK
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
Arabidopsis Description
FAS4FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.