Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG30805 | Sorghum | nucleus | 77.28 | 77.04 |
| Zm00001d017967_P003 | Maize | nucleus | 75.08 | 74.67 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 75.24 | 74.42 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 74.45 | 73.58 |
| TraesCS6A01G178200.1 | Wheat | nucleus | 70.91 | 73.39 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 74.37 | 71.34 |
| TraesCS6A01G299400.2 | Wheat | nucleus | 74.14 | 71.12 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 73.74 | 71.11 |
| GSMUA_Achr3P08220_001 | Banana | nucleus | 51.97 | 61.49 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 53.46 | 51.48 |
| Solyc01g095710.2.1 | Tomato | nucleus | 52.52 | 49.81 |
| AT1G33390.2 | Thale cress | nucleus | 48.11 | 49.47 |
| PGSC0003DMT400000297 | Potato | nucleus | 51.81 | 49.33 |
| KRH76262 | Soybean | nucleus | 50.55 | 48.68 |
| KRH65271 | Soybean | nucleus | 50.24 | 48.34 |
| CDY48353 | Canola | nucleus | 46.46 | 48.32 |
| CDY34159 | Canola | nucleus | 46.7 | 48.02 |
| Bra032998.1-P | Field mustard | nucleus | 46.38 | 47.7 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 11.4 | 39.51 |
| Os03t0314100-01 | Rice | cytosol, nucleus, plastid | 15.64 | 35.28 |
| Os02t0301500-01 | Rice | nucleus | 15.09 | 35.16 |
| Os11t0310800-01 | Rice | nucleus | 18.55 | 33.33 |
| Os01t0212100-01 | Rice | nucleus | 17.14 | 31.14 |
| Os06t0192500-02 | Rice | mitochondrion | 9.36 | 29.17 |
| Os06t0343100-01 | Rice | nucleus | 20.6 | 24.17 |
| Os05t0389800-01 | Rice | nucleus | 20.28 | 24.11 |
| Os01t0118100-01 | Rice | cytosol, mitochondrion, nucleus | 13.84 | 21.52 |
| Os10t0471350-01 | Rice | nucleus | 16.75 | 21.34 |
| Os07t0508000-01 | Rice | nucleus | 20.28 | 20.16 |
| Os03t0748800-01 | Rice | mitochondrion | 17.45 | 19.3 |
| Os01t0767700-01 | Rice | nucleus | 15.49 | 16.11 |
| Os04t0432200-00 | Rice | extracellular | 0.63 | 10.96 |
| Os07t0621500-01 | Rice | cytosol, nucleus | 11.01 | 10.88 |
| Os02t0736800-01 | Rice | mitochondrion | 0.08 | 1.04 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:AK121498 | ProteinID:BAD15903.1 | ProteinID:BAF09969.1 |
| ProteinID:BAS80810.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlantsGene:Os02g0736600 |
| EnsemblPlants:Os02t0736600-01 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF99 | UniProt:Q6Z742 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI0000358BE0 | SEG:seg |
Description
DEAD-like helicase, N-terminal domain containing protein. (Os02t0736600-01)
Coordinates
chr2:+:30756675..30762754
Molecular Weight (calculated)
143459.0 Da
IEP (calculated)
7.202
GRAVY (calculated)
-0.522
Length
1272 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDSNTLILP CKRKNKGQGK DKDGKKIKED PKMSKSKLKK LQNLEEEKQK KLLQAQSIEI LRKHKISDDA YSLLHASGTI GQAETLKEKR RRAVHFSKAG
0101: LNVPEELSLL KKDGDQKASE NSEAAEEDYL DKIVDSAKNE DPQRKCNNHI DNVAMKPVEC KLVIDVGLSD QEPKTEGSDG VPNISANQAI QSCVPSCSGE
0201: EILQDKEPGQ EERTVQECFN PPIVVPVSRP HEVEKTRRDL PIIMMEQEIM EAIYENSVVI LCGETGCGKT TQVPQFLYEA GFGTSNRSDR KGIIGITQPR
0301: RVAVLATARR VSYELGLKLG KEVGFQVRHD KMVGSKCSIK FMTDGILLRE VQSDFLLKRY SVIILDEAHE RSLNTDILIG MLSRIIKIRK SLYIEQQEKI
0401: RCGLSINPED KISQLKVVLM SATLQLKDFI SNRRLFDVIP PAIKVPVRQF PVTVHFSKST HDDYLGQAYK KVMSIHKKLP QGGILVFVTG QREVDYLCKK
0501: LQRASKQQTD KKTEKVEGDE NGSSQEVVER EISEAYDIDR DESEHQDDMF SQYDEDESNA GPGVDSSDIE MEPEMDTDSE DDDSVYETTE EDGPVLAFLK
0601: GAEGSSGLKA SFKAISRVSG EPESTDVPSN ATILEESSHV PCTSKCTEPR SVSHGKLRVL PLYAMLPASQ QLRVFQDIPD GERLVVVATN VAETSLTIPG
0701: IKYVVDTGKQ KVKNYNHATG MASYEIQWIS KASASQRSGR AGRTGPGHCY HLYSAAAYGK DELFPEFSEP EIKNIPVDGV VLMLKFMNIN KVENFPFPTP
0801: PDKESLVEAE RCLKVLEALD SKGEPTLMGK AMAQYPMSPR HSRLLLTIVK ILNSQRCFSR PNFILGYAAA AASALSFTNP FLTQNEFSGE SKQDNPDSED
0901: KDRQERKRQK KLKAMVREAH TKFSNPSSDA LSISRALQLF ELSENPVEFC RVNSLHLKTM EEMSKLRKQL LRLIFHHSKF CEEFSWKFGV SEDVEEAWRH
1001: ESDKKPMQLN EEELLGQGIC AGWADRVAKR IRAFPGPSKD DKKVRAVHYQ SCAFNDTIYL HRSSSVARIA PEFVVYSELL HTKRSYMHGV TSVKPGWILK
1101: YASSLCTFSA PLEDPKPYYE PQKDQVYCYV SPIFSRHNWQ LPLHSLPIQD GTNRLQVFAC ALLKGDVLPC LKVIQKFLAL SPSVLLGPVS QRRVGDLLDR
1201: MKIGSKLIDS RAALRDVWNF NPDFLYPEIK AWIQDKFHSH FGAIWEQMHK EVVLEGDELF PKRYKKVKGN QF
0101: LNVPEELSLL KKDGDQKASE NSEAAEEDYL DKIVDSAKNE DPQRKCNNHI DNVAMKPVEC KLVIDVGLSD QEPKTEGSDG VPNISANQAI QSCVPSCSGE
0201: EILQDKEPGQ EERTVQECFN PPIVVPVSRP HEVEKTRRDL PIIMMEQEIM EAIYENSVVI LCGETGCGKT TQVPQFLYEA GFGTSNRSDR KGIIGITQPR
0301: RVAVLATARR VSYELGLKLG KEVGFQVRHD KMVGSKCSIK FMTDGILLRE VQSDFLLKRY SVIILDEAHE RSLNTDILIG MLSRIIKIRK SLYIEQQEKI
0401: RCGLSINPED KISQLKVVLM SATLQLKDFI SNRRLFDVIP PAIKVPVRQF PVTVHFSKST HDDYLGQAYK KVMSIHKKLP QGGILVFVTG QREVDYLCKK
0501: LQRASKQQTD KKTEKVEGDE NGSSQEVVER EISEAYDIDR DESEHQDDMF SQYDEDESNA GPGVDSSDIE MEPEMDTDSE DDDSVYETTE EDGPVLAFLK
0601: GAEGSSGLKA SFKAISRVSG EPESTDVPSN ATILEESSHV PCTSKCTEPR SVSHGKLRVL PLYAMLPASQ QLRVFQDIPD GERLVVVATN VAETSLTIPG
0701: IKYVVDTGKQ KVKNYNHATG MASYEIQWIS KASASQRSGR AGRTGPGHCY HLYSAAAYGK DELFPEFSEP EIKNIPVDGV VLMLKFMNIN KVENFPFPTP
0801: PDKESLVEAE RCLKVLEALD SKGEPTLMGK AMAQYPMSPR HSRLLLTIVK ILNSQRCFSR PNFILGYAAA AASALSFTNP FLTQNEFSGE SKQDNPDSED
0901: KDRQERKRQK KLKAMVREAH TKFSNPSSDA LSISRALQLF ELSENPVEFC RVNSLHLKTM EEMSKLRKQL LRLIFHHSKF CEEFSWKFGV SEDVEEAWRH
1001: ESDKKPMQLN EEELLGQGIC AGWADRVAKR IRAFPGPSKD DKKVRAVHYQ SCAFNDTIYL HRSSSVARIA PEFVVYSELL HTKRSYMHGV TSVKPGWILK
1101: YASSLCTFSA PLEDPKPYYE PQKDQVYCYV SPIFSRHNWQ LPLHSLPIQD GTNRLQVFAC ALLKGDVLPC LKVIQKFLAL SPSVLLGPVS QRRVGDLLDR
1201: MKIGSKLIDS RAALRDVWNF NPDFLYPEIK AWIQDKFHSH FGAIWEQMHK EVVLEGDELF PKRYKKVKGN QF
0001: MASVVGDDCN LDVMPPRKKK NKGSNKMQDK LNSNNNTGSK KSRKRKLNSN VNTVACKSQK RKLKKLEEDK EKEILFSKTA ELLDKYKISE DVSSLLQSSK
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
Arabidopsis Description
FAS4FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.