Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G299400.2 | Wheat | nucleus | 97.66 | 97.66 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 92.84 | 93.33 |
| KXG30805 | Sorghum | nucleus | 71.64 | 74.45 |
| Os02t0736600-01 | Rice | nucleus | 71.34 | 74.37 |
| Zm00001d017967_P003 | Maize | nucleus | 69.53 | 72.09 |
| GSMUA_Achr3P08220_001 | Banana | nucleus | 48.79 | 60.19 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 49.92 | 50.11 |
| AT1G33390.2 | Thale cress | nucleus | 44.87 | 48.1 |
| Solyc01g095710.2.1 | Tomato | nucleus | 48.64 | 48.1 |
| PGSC0003DMT400000297 | Potato | nucleus | 48.34 | 47.98 |
| KRH76262 | Soybean | nucleus | 46.76 | 46.93 |
| KRH65271 | Soybean | nucleus | 46.76 | 46.9 |
| CDY48353 | Canola | nucleus | 42.99 | 46.61 |
| CDY34159 | Canola | nucleus | 43.36 | 46.48 |
| Bra032998.1-P | Field mustard | nucleus | 43.06 | 46.16 |
| TraesCS4D01G074200.1 | Wheat | nucleus | 17.8 | 33.48 |
| TraesCS4D01G181700.1 | Wheat | cytosol | 17.57 | 32.32 |
| TraesCS3D01G148100.1 | Wheat | nucleus | 17.04 | 32.24 |
| TraesCS7D01G157100.1 | Wheat | plastid | 16.82 | 31.28 |
| TraesCS3D01G264900.1 | Wheat | plastid | 19.31 | 27.8 |
| TraesCS7D01G341800.1 | Wheat | nucleus | 20.06 | 24.58 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 19.38 | 24.57 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 19.08 | 23.85 |
| TraesCS1D01G148100.2 | Wheat | nucleus | 16.21 | 20.89 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 20.21 | 20.79 |
| TraesCS5D01G397600.1 | Wheat | nucleus | 16.21 | 18.7 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 19.76 | 18.67 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 16.44 | 17.55 |
| TraesCS3D01G302800.2 | Wheat | plastid | 15.38 | 16.01 |
| TraesCS3D01G112900.1 | Wheat | nucleus | 16.14 | 16.01 |
| TraesCS2D01G302700.1 | Wheat | plastid | 15.38 | 14.28 |
| TraesCS5D01G087800.2 | Wheat | nucleus | 16.59 | 13.13 |
| TraesCS2D01G171200.2 | Wheat | nucleus | 16.59 | 12.6 |
| Os02t0736800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 |
| PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF99 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS6D01G279300 | EnsemblPlants:TraesCS6D01G279300.1 |
| TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6D:+:387639515..387644762
Molecular Weight (calculated)
148815.0 Da
IEP (calculated)
8.637
GRAVY (calculated)
-0.587
Length
1326 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEEDSNAPI LPCKRKNKPQ GKGKDGKKNK TKEDAKMSKK TQLKKLQKLE VGTSSVDSNA LILPCKSKNK SQGKGKDGKK NKTKEDAKMS KTQLKKLQKL
0101: EEDKQKKAMQ AQSIETLQKH RIADEAYSLL HTSGSIGQAA TMKEKRRRAM QLSKAGLDVP EELSLFKKNS DQKGVPVPEN SEAAPEACPV KLVQAAKLCH
0201: PGSERKNHES DAVKPNIGIG VSILDQKTEE TNDDADILAH QSILKQKTEK TNDDDDILVH PKVRSSVPSC SGVEIDMQDK EPQQGEAAVQ ECFNSPIVVH
0301: VSRPHEVEKA RRDLPIIMME QEIMEAIYEN SVVILCGETG CGKTTQVPQF LYEAGFGTSN RADRKGMIGI TQPRRVAVLA TSKRVSYELG LKLGKEVGFQ
0401: VRHDKKVGNN CSIKFMTDGI LLREVQSDFL LKHYSVIILD EAHERSLNTD ILIGMLSRVI KARKFVYADQ QKQIRSGMKI DPADMVSQLK VVLMSATLQL
0501: KDFISNRRLF DVIPPAVEVP TRQFPVTVHF AKRTHDDYLA QAYKKVLSIH KSLPPGGILV FVTGQREVDY LCKKLQRASK RQSGKKPEMV GDEDGSRPEI
0601: EEKEIFEAYD IDRTEPEHQD DIFSSYGEDE TDDEVNVASS DAETESEMDT DSDEEDSVAH ETAEEDGPVL SFLKGAESSS VLKASFKAIS GQPETAEEAS
0701: NATIAEKSGP SASRARLRVL PLYAMLPASQ QLRVFHGIPE GERLVVVATN VAETSLTIPG ITYVVDTGKE KVKNYDHATG MASYEVQWIS KASASQRAGR
0801: AGRTGPGHCY RLYSGAAYSK DDLFPEFTEP EIKKMPVEGI VLMLKSMNID KVENFPFPTP PNKESLVEAQ RCLKILEAVD NQEKLTSMGK AMAQYPMSPR
0901: HSRLLLTIIK MLKSQEGRAR SNLILGYATA AASALSYTNP FQVQSNTDRE TNEDGPDPEH KDRHERKSQK KLKAMVREAR KDFSIPSSDA LTISHALRSF
1001: ECSKNRVEFC RDYSLHLKTM EEMSKLRKQL LRLIFNYSKF CDEFAWNFGG SQDVEHAWGS ETNKKPMLNE EEILGQGICA GWADRVAKKI NTFSGLSKED
1101: RKVRAARYQS CALNDIIYLN RSSSVAQIPP DYVVYSELLN TKRSYMYGVT SVKPGWLLKY ASSLCTFSAP LEDPKPYYEP QNDQVYCYVS PIFSRHNWQL
1201: PLHSLPIKDA TRRVQIFAWA LLKGDVLPCL RVVQKFLALS PSVVLGPASQ RRVGDLLSRM SKKTIYSRAA LRDAWNTDPD YLYPEIQAWI QDKYQSQLGA
1301: IWEQMHQEVR LEGRELFPKR FKKVKG
0101: EEDKQKKAMQ AQSIETLQKH RIADEAYSLL HTSGSIGQAA TMKEKRRRAM QLSKAGLDVP EELSLFKKNS DQKGVPVPEN SEAAPEACPV KLVQAAKLCH
0201: PGSERKNHES DAVKPNIGIG VSILDQKTEE TNDDADILAH QSILKQKTEK TNDDDDILVH PKVRSSVPSC SGVEIDMQDK EPQQGEAAVQ ECFNSPIVVH
0301: VSRPHEVEKA RRDLPIIMME QEIMEAIYEN SVVILCGETG CGKTTQVPQF LYEAGFGTSN RADRKGMIGI TQPRRVAVLA TSKRVSYELG LKLGKEVGFQ
0401: VRHDKKVGNN CSIKFMTDGI LLREVQSDFL LKHYSVIILD EAHERSLNTD ILIGMLSRVI KARKFVYADQ QKQIRSGMKI DPADMVSQLK VVLMSATLQL
0501: KDFISNRRLF DVIPPAVEVP TRQFPVTVHF AKRTHDDYLA QAYKKVLSIH KSLPPGGILV FVTGQREVDY LCKKLQRASK RQSGKKPEMV GDEDGSRPEI
0601: EEKEIFEAYD IDRTEPEHQD DIFSSYGEDE TDDEVNVASS DAETESEMDT DSDEEDSVAH ETAEEDGPVL SFLKGAESSS VLKASFKAIS GQPETAEEAS
0701: NATIAEKSGP SASRARLRVL PLYAMLPASQ QLRVFHGIPE GERLVVVATN VAETSLTIPG ITYVVDTGKE KVKNYDHATG MASYEVQWIS KASASQRAGR
0801: AGRTGPGHCY RLYSGAAYSK DDLFPEFTEP EIKKMPVEGI VLMLKSMNID KVENFPFPTP PNKESLVEAQ RCLKILEAVD NQEKLTSMGK AMAQYPMSPR
0901: HSRLLLTIIK MLKSQEGRAR SNLILGYATA AASALSYTNP FQVQSNTDRE TNEDGPDPEH KDRHERKSQK KLKAMVREAR KDFSIPSSDA LTISHALRSF
1001: ECSKNRVEFC RDYSLHLKTM EEMSKLRKQL LRLIFNYSKF CDEFAWNFGG SQDVEHAWGS ETNKKPMLNE EEILGQGICA GWADRVAKKI NTFSGLSKED
1101: RKVRAARYQS CALNDIIYLN RSSSVAQIPP DYVVYSELLN TKRSYMYGVT SVKPGWLLKY ASSLCTFSAP LEDPKPYYEP QNDQVYCYVS PIFSRHNWQL
1201: PLHSLPIKDA TRRVQIFAWA LLKGDVLPCL RVVQKFLALS PSVVLGPASQ RRVGDLLSRM SKKTIYSRAA LRDAWNTDPD YLYPEIQAWI QDKYQSQLGA
1301: IWEQMHQEVR LEGRELFPKR FKKVKG
0001: MASVVGDDCN LDVMPPRKKK NKGSNKMQDK LNSNNNTGSK KSRKRKLNSN VNTVACKSQK RKLKKLEEDK EKEILFSKTA ELLDKYKISE DVSSLLQSSK
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
Arabidopsis Description
FAS4FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.