Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G249700.1 | Wheat | nucleus | 89.09 | 98.97 |
| TraesCS2A01G233700.1 | Wheat | nucleus | 88.95 | 98.81 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 88.1 | 97.86 |
| Os07t0508000-01 | Rice | nucleus | 80.83 | 88.59 |
| VIT_01s0010g02920.t01 | Wine grape | nucleus | 55.02 | 88.23 |
| KXG36287 | Sorghum | nucleus | 80.11 | 87.47 |
| TraesCS3D01G264900.1 | Wheat | plastid | 55.45 | 84.47 |
| Zm00001d006459_P003 | Maize | plastid | 77.76 | 81.06 |
| Solyc12g089010.1.1 | Tomato | nucleus | 46.33 | 80.25 |
| PGSC0003DMT400039875 | Potato | nucleus | 48.75 | 74.11 |
| CDY23802 | Canola | nucleus | 27.73 | 74.1 |
| KRH23170 | Soybean | nucleus | 67.07 | 74.04 |
| KRH10165 | Soybean | nucleus | 66.57 | 73.43 |
| Bra023387.1-P | Field mustard | nucleus | 64.79 | 72.84 |
| CDX85676 | Canola | nucleus | 64.72 | 72.76 |
| CDX91151 | Canola | nucleus | 64.72 | 72.7 |
| PGSC0003DMT400018531 | Potato | nucleus | 66.43 | 72.53 |
| Solyc10g076910.1.1 | Tomato | nucleus | 66.36 | 72.45 |
| AT5G13010.1 | Thale cress | nucleus | 64.29 | 71.87 |
| TraesCS7D01G157100.1 | Wheat | plastid | 21.31 | 41.94 |
| TraesCS3D01G148100.1 | Wheat | nucleus | 20.24 | 40.51 |
| TraesCS4D01G181700.1 | Wheat | cytosol | 20.81 | 40.5 |
| TraesCS4D01G074200.1 | Wheat | nucleus | 20.1 | 40.0 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 27.8 | 37.28 |
| TraesCS7D01G341800.1 | Wheat | nucleus | 27.44 | 35.58 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 26.66 | 35.25 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 30.08 | 32.74 |
| TraesCS1D01G148100.2 | Wheat | nucleus | 17.11 | 23.32 |
| TraesCS5D01G397600.1 | Wheat | nucleus | 17.39 | 21.22 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 18.67 | 19.76 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 16.68 | 18.84 |
| TraesCS3D01G112900.1 | Wheat | nucleus | 17.61 | 18.47 |
| TraesCS3D01G302800.2 | Wheat | plastid | 16.04 | 17.66 |
| TraesCS2D01G302700.1 | Wheat | plastid | 17.82 | 17.49 |
| TraesCS5D01G087800.2 | Wheat | nucleus | 17.82 | 14.93 |
| TraesCS2D01G171200.2 | Wheat | nucleus | 17.89 | 14.38 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.6 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF91 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS2D01G231900 | EnsemblPlants:TraesCS2D01G231900.1 | TIGR:cd00046 | TIGR:cd00079 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:204489660..204497585
Molecular Weight (calculated)
156873.0 Da
IEP (calculated)
7.920
GRAVY (calculated)
-0.634
Length
1403 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLYGPEVNAA NLRERSKRCL VTRAGERAAV HLSLICFPIP KPSGGGDSNS GRPSPSPSPP PVRPALPLRR SAPPGLPRTG SAARGSSLRP PCCRCLLAPS
0101: TSSPLLHRCT ADPSSTDHGT APVLHQGIPS SKFLAPPLPM MSSDGRLDLD ATTSTLGPED DTAQGLILPT KDKVMYRPPP GKSALGLDLL AHKKREKEVN
0201: NSFKRPPEKV VTAASSMDED ERPGSTENDA SSLSGVDRGI VARRYRGTNS SEKTSSKEST VTDENERGLT PRHRDESHRQ QTPASRYEPD DDRRSRDKRG
0301: ERETSASIGY SSSGRRGYRD DRESNSRRNE RSRSTSIDYT NKRSRDDYSS RSSRTPARSD WDSGRWEWED TPRREYRDDR PGSQRHYPTR SPMLAAASPD
0401: ARLVSPWLGG NTPRSAASPW DHVSPSPAPV RASGSSKGSS YSSSSGRSHL LTFSNDAEAD RSPSAADRNY DITEEMMQEM DYNADRAWYD CEEHNTVFDG
0501: DNYAADDSSY KKKEAQLPKK LTRKDGSLMT LSQSKKLSQM TADNAQWEDR QLLRSGAVRG TEVQTEFDDE DERKVILLVH DTKPPFLDGR VVYTKQAEPV
0601: MPLKDPTSDM AIIARKGSVL VREIREKQSQ NKSRQRFWEL AGSNLGNILG VEKTSEQVDA DTAVVGDQGE IDFKEEAKFS QHLKEKAEAV SDFAKSKSLS
0701: QQRQYLPIYT VRDDLLQVVR ENQVVVVVGE TGSGKTTQLT QYLHEDGYTT TGVVGCTQPR RVAAMSVAKR VSEEMETELG DKVGYAIRFE DVTCSSTIIK
0801: YMTDGVLLRE TLKDADLDKY RVIVMDEAHE RSLNTDVLFG ILKKVVARRR DFKLIVTSAT LNADKFSKFF GGVPVFNIPG RTFPVNILFS KTPCEDYVEA
0901: AVKQAMTIHI TSGPGDILIF MTGQEEIEAT CYALAERMEQ LISSSTKNVP KLSILPIYSQ LPADLQAKIF QKAEEGTRKC IVATNIAETS LTVDGIFYVI
1001: DTGYGKMKVY NPRMGMDALQ VFPCSRAAAD QRAGRAGRTG PGTCYRLFTE SAYQNEMLPN PVPEIQRTNL GNVVLLLKSL KVENLLDFDF MDPPPQENIL
1101: NSMYQLWVLG ALNNVGGLTE IGWKMVEFPL DPTLAKMLLM GEKLDCLDEV LTVVSMLSVP SVFFRPKDRA EESDAAREKF FVPESDHLTL LNVYLQWKSN
1201: QYRGDWCNDH FLHVKGLRKA REVRSQLLDI LKALKIPLTS CHMEWDVVRK AICSAYFHNS ARLKGIGEYV NCRNGMPCHL HPSSALYGLG YTPDYVVYHE
1301: LVLTTKEYMQ CVSAVDPQWL AELGPMFFSV KDTDTSLLDH KKRQKEEKTA MEEEMEKLRQ EQAEAALLEK ERERRKRAKQ QQQISMPGLK KGSTYLRPKK
1401: MGL
0101: TSSPLLHRCT ADPSSTDHGT APVLHQGIPS SKFLAPPLPM MSSDGRLDLD ATTSTLGPED DTAQGLILPT KDKVMYRPPP GKSALGLDLL AHKKREKEVN
0201: NSFKRPPEKV VTAASSMDED ERPGSTENDA SSLSGVDRGI VARRYRGTNS SEKTSSKEST VTDENERGLT PRHRDESHRQ QTPASRYEPD DDRRSRDKRG
0301: ERETSASIGY SSSGRRGYRD DRESNSRRNE RSRSTSIDYT NKRSRDDYSS RSSRTPARSD WDSGRWEWED TPRREYRDDR PGSQRHYPTR SPMLAAASPD
0401: ARLVSPWLGG NTPRSAASPW DHVSPSPAPV RASGSSKGSS YSSSSGRSHL LTFSNDAEAD RSPSAADRNY DITEEMMQEM DYNADRAWYD CEEHNTVFDG
0501: DNYAADDSSY KKKEAQLPKK LTRKDGSLMT LSQSKKLSQM TADNAQWEDR QLLRSGAVRG TEVQTEFDDE DERKVILLVH DTKPPFLDGR VVYTKQAEPV
0601: MPLKDPTSDM AIIARKGSVL VREIREKQSQ NKSRQRFWEL AGSNLGNILG VEKTSEQVDA DTAVVGDQGE IDFKEEAKFS QHLKEKAEAV SDFAKSKSLS
0701: QQRQYLPIYT VRDDLLQVVR ENQVVVVVGE TGSGKTTQLT QYLHEDGYTT TGVVGCTQPR RVAAMSVAKR VSEEMETELG DKVGYAIRFE DVTCSSTIIK
0801: YMTDGVLLRE TLKDADLDKY RVIVMDEAHE RSLNTDVLFG ILKKVVARRR DFKLIVTSAT LNADKFSKFF GGVPVFNIPG RTFPVNILFS KTPCEDYVEA
0901: AVKQAMTIHI TSGPGDILIF MTGQEEIEAT CYALAERMEQ LISSSTKNVP KLSILPIYSQ LPADLQAKIF QKAEEGTRKC IVATNIAETS LTVDGIFYVI
1001: DTGYGKMKVY NPRMGMDALQ VFPCSRAAAD QRAGRAGRTG PGTCYRLFTE SAYQNEMLPN PVPEIQRTNL GNVVLLLKSL KVENLLDFDF MDPPPQENIL
1101: NSMYQLWVLG ALNNVGGLTE IGWKMVEFPL DPTLAKMLLM GEKLDCLDEV LTVVSMLSVP SVFFRPKDRA EESDAAREKF FVPESDHLTL LNVYLQWKSN
1201: QYRGDWCNDH FLHVKGLRKA REVRSQLLDI LKALKIPLTS CHMEWDVVRK AICSAYFHNS ARLKGIGEYV NCRNGMPCHL HPSSALYGLG YTPDYVVYHE
1301: LVLTTKEYMQ CVSAVDPQWL AELGPMFFSV KDTDTSLLDH KKRQKEEKTA MEEEMEKLRQ EQAEAALLEK ERERRKRAKQ QQQISMPGLK KGSTYLRPKK
1401: MGL
0001: MGVDPFKTTE TLEADKETNG GVPVKDKLTF KAPERKSRLG LDARAIEKKD NAKTEGEFKV PKKSAISVTS SLDEEDKSDV SGLDFGTENT RPVHSSRRYR
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
Arabidopsis Description
CUVPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Source:UniProtKB/Swiss-Prot;Acc:F4K2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.