Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0010g02920.t01 | Wine grape | nucleus | 75.62 | 45.37 |
| Solyc12g089010.1.1 | Tomato | nucleus | 65.71 | 42.59 |
| TraesCS3D01G264900.1 | Wheat | plastid | 68.95 | 39.31 |
| PGSC0003DMT400039875 | Potato | nucleus | 68.0 | 38.68 |
| CDX85676 | Canola | nucleus | 80.95 | 34.05 |
| CDX91151 | Canola | nucleus | 80.95 | 34.03 |
| AT5G13010.1 | Thale cress | nucleus | 80.76 | 33.78 |
| KRH23170 | Soybean | nucleus | 75.43 | 31.16 |
| KRH10165 | Soybean | nucleus | 75.05 | 30.97 |
| Solyc10g076910.1.1 | Tomato | nucleus | 75.81 | 30.97 |
| PGSC0003DMT400018531 | Potato | nucleus | 75.62 | 30.89 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 74.1 | 30.8 |
| TraesCS2A01G233700.1 | Wheat | nucleus | 74.1 | 30.8 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 74.1 | 30.8 |
| CDY37024 | Canola | cytosol, mitochondrion | 18.86 | 30.56 |
| KXG36287 | Sorghum | nucleus | 74.67 | 30.51 |
| Os07t0508000-01 | Rice | nucleus | 74.29 | 30.47 |
| CDX74059 | Canola | nucleus | 14.86 | 29.55 |
| Zm00001d006459_P003 | Maize | plastid | 74.48 | 29.05 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 74.1 | 27.73 |
| CDY23338 | Canola | cytosol | 22.29 | 27.73 |
| CDX74061 | Canola | cytosol | 15.43 | 25.23 |
| CDX99466 | Canola | nucleus | 28.19 | 21.14 |
| CDX78859 | Canola | nucleus | 28.0 | 21.06 |
| CDY11413 | Canola | nucleus | 28.76 | 21.03 |
| CDY68405 | Canola | nucleus | 26.67 | 20.9 |
| CDX76626 | Canola | nucleus | 28.57 | 20.89 |
| CDX83337 | Canola | cytosol | 28.57 | 20.75 |
| CDX95715 | Canola | cytosol | 28.57 | 20.69 |
| CDY40514 | Canola | nucleus | 31.24 | 19.05 |
| CDY51663 | Canola | nucleus | 2.29 | 19.05 |
| CDX91491 | Canola | nucleus | 2.29 | 19.05 |
| CDY60185 | Canola | nucleus | 31.05 | 18.98 |
| CDY34567 | Canola | nucleus | 23.43 | 18.55 |
| CDY36075 | Canola | nucleus | 23.43 | 18.25 |
| CDX85017 | Canola | cytosol, plastid | 24.95 | 18.14 |
| CDY16154 | Canola | nucleus, plastid | 24.95 | 18.12 |
| CDY11762 | Canola | nucleus | 24.19 | 18.04 |
| CDX90112 | Canola | nucleus | 24.19 | 18.01 |
| CDX83624 | Canola | nucleus | 37.9 | 17.85 |
| CDY13640 | Canola | nucleus | 38.1 | 17.78 |
| CDY32702 | Canola | nucleus | 23.24 | 17.63 |
| CDY26898 | Canola | nucleus | 32.95 | 16.57 |
| CDY32278 | Canola | endoplasmic reticulum | 32.95 | 16.57 |
| CDY02818 | Canola | nucleus | 20.57 | 16.27 |
| CDY48353 | Canola | nucleus | 25.33 | 10.87 |
| CDY34159 | Canola | nucleus | 25.33 | 10.75 |
| CDX79642 | Canola | nucleus, vacuole | 20.57 | 10.43 |
| CDX84588 | Canola | plastid, vacuole | 20.57 | 10.43 |
| CDX93688 | Canola | plastid | 20.95 | 9.32 |
| CDY40601 | Canola | nucleus, plastid | 20.95 | 9.31 |
| CDY10756 | Canola | nucleus | 19.05 | 9.18 |
| CDX98799 | Canola | mitochondrion | 19.43 | 8.84 |
| CDX70187 | Canola | mitochondrion | 19.43 | 8.82 |
| CDY17694 | Canola | nucleus | 18.86 | 8.72 |
| CDY57512 | Canola | nucleus | 18.86 | 8.72 |
| CDX97797 | Canola | nucleus | 18.86 | 7.67 |
| CDY29644 | Canola | nucleus | 18.67 | 7.5 |
| CDY29164 | Canola | nucleus | 20.19 | 7.44 |
| CDY39917 | Canola | nucleus | 20.0 | 7.43 |
| CDY63687 | Canola | nucleus, plastid | 14.67 | 6.94 |
| CDY10215 | Canola | nucleus | 16.57 | 6.78 |
| CDX81170 | Canola | plastid | 22.67 | 6.75 |
| CDX78376 | Canola | plastid | 22.48 | 6.72 |
| CDX96996 | Canola | nucleus | 22.29 | 6.61 |
| CDX69841 | Canola | plastid | 22.1 | 6.56 |
Protein Annotations
| EnsemblPlants:CDY23802 | EnsemblPlantsGene:GSBRNA2T00024199001 | Gene3D:1.10.10.2130 | Gene3D:3.40.50.300 | InterPro:DUF1605 | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:P-loop_NTPase | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF91 | PFAM:PF00271 | PFAM:PF07717 |
| PFscan:PS51194 | ProteinID:CDY23802 | ProteinID:CDY23802.1 | SEG:seg | SMART:SM00490 | SUPFAM:SSF52540 |
| UniParc:UPI0004EE9CAD | UniProt:A0A078GFA3 | MapMan:35.1 | : | : | : |
Description
BnaA01g21530DBnaA01g21530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFA3]
Coordinates
chrLK032149:+:257185..260780
Molecular Weight (calculated)
59400.8 Da
IEP (calculated)
7.494
GRAVY (calculated)
-0.213
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLAKCKKQS RLKADIAQWE DCQLLSSGAV RGTQLQAGFS REEEEEERVV LLVHDAKLPP FLDNGKAVFT KQVEPVKDPT SDMAIVSRKG SGLVREIWGK
101: QGLHKSRQRF WKLAGSNLGV EKPAEIDADT AVVGKKGEVD FRGEASPPRD ILMFMTGQQE IEAACFSLTE RMEQLIASSS KEITNLLILQ IYSQLPADLQ
201: AKIFQKSEDG ARKCIVATYI AETSLTVDGI YYVIDTWYGK MKVFNPRMHM DALQVFPIRR AASDQRAGRA GRTGPVACYR LYTESAYLND MFPSPVPEIQ
301: RTNLGNVVLL LKSMKIANLL DFDFMDPPPQ ENIHSSMYQL WVLGALNNTA GFFSPSTVEL PLDPPLAKML LMGERFKFFV PESHHVTLLN VYQQWENHGF
401: RGDWYWCNDH YLQVKSLEKS REVRSQLLDI LKQLKIPLKS CGQDWDVVRK AICSAYFHNS SRLKGVAAYV NCITGMPCHL HQSNALYGLG YTPDYIVYLE
501: LVLTTKEYMQ CATSVDPHWL SLFMA
101: QGLHKSRQRF WKLAGSNLGV EKPAEIDADT AVVGKKGEVD FRGEASPPRD ILMFMTGQQE IEAACFSLTE RMEQLIASSS KEITNLLILQ IYSQLPADLQ
201: AKIFQKSEDG ARKCIVATYI AETSLTVDGI YYVIDTWYGK MKVFNPRMHM DALQVFPIRR AASDQRAGRA GRTGPVACYR LYTESAYLND MFPSPVPEIQ
301: RTNLGNVVLL LKSMKIANLL DFDFMDPPPQ ENIHSSMYQL WVLGALNNTA GFFSPSTVEL PLDPPLAKML LMGERFKFFV PESHHVTLLN VYQQWENHGF
401: RGDWYWCNDH YLQVKSLEKS REVRSQLLDI LKQLKIPLKS CGQDWDVVRK AICSAYFHNS SRLKGVAAYV NCITGMPCHL HQSNALYGLG YTPDYIVYLE
501: LVLTTKEYMQ CATSVDPHWL SLFMA
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.