Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39917 | Canola | nucleus | 97.47 | 98.23 |
| AT1G58060.1 | Thale cress | nucleus | 87.5 | 85.4 |
| CDY63687 | Canola | nucleus, plastid | 49.58 | 63.6 |
| VIT_12s0035g00800.t01 | Wine grape | nucleus | 60.67 | 63.11 |
| Solyc01g103690.2.1 | Tomato | nucleus | 61.52 | 60.92 |
| Os04t0432200-00 | Rice | extracellular | 3.09 | 60.27 |
| KRH01863 | Soybean | nucleus | 60.32 | 59.74 |
| GSMUA_Achr6P17860_001 | Banana | nucleus | 53.3 | 53.34 |
| TraesCS2A01G304100.1 | Wheat | nucleus, plastid | 52.6 | 52.41 |
| KXG26332 | Sorghum | nucleus, plastid | 52.25 | 52.17 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 52.25 | 52.1 |
| Zm00001d003655_P006 | Maize | nucleus, plastid | 52.04 | 52.04 |
| TraesCS2D01G302700.1 | Wheat | plastid | 52.04 | 51.85 |
| CDX84588 | Canola | plastid, vacuole | 25.56 | 35.17 |
| CDX79642 | Canola | nucleus, vacuole | 25.42 | 34.98 |
| CDY68405 | Canola | nucleus | 14.4 | 30.6 |
| CDY57512 | Canola | nucleus | 24.09 | 30.22 |
| CDX74061 | Canola | cytosol | 6.81 | 30.22 |
| CDY36075 | Canola | nucleus | 14.19 | 29.97 |
| CDY17694 | Canola | nucleus | 23.81 | 29.87 |
| CDY34567 | Canola | nucleus | 13.83 | 29.71 |
| CDX78859 | Canola | nucleus | 14.54 | 29.66 |
| CDX99466 | Canola | nucleus | 14.54 | 29.57 |
| CDX98799 | Canola | mitochondrion | 23.74 | 29.29 |
| CDX85017 | Canola | cytosol, plastid | 14.82 | 29.22 |
| CDX74059 | Canola | nucleus | 5.41 | 29.17 |
| CDX70187 | Canola | mitochondrion | 23.67 | 29.15 |
| CDY16154 | Canola | nucleus, plastid | 14.75 | 29.05 |
| CDX95715 | Canola | cytosol | 14.4 | 28.28 |
| CDY11413 | Canola | nucleus | 14.26 | 28.27 |
| CDY11762 | Canola | nucleus | 13.97 | 28.27 |
| CDX90112 | Canola | nucleus | 13.97 | 28.23 |
| CDX83337 | Canola | cytosol | 14.33 | 28.22 |
| CDX76626 | Canola | nucleus | 14.19 | 28.13 |
| CDY40601 | Canola | nucleus, plastid | 23.24 | 28.03 |
| CDX93688 | Canola | plastid | 23.17 | 27.97 |
| CDY23338 | Canola | cytosol | 8.29 | 27.96 |
| CDY02818 | Canola | nucleus | 12.85 | 27.56 |
| CDY32702 | Canola | nucleus | 13.34 | 27.46 |
| CDY60185 | Canola | nucleus | 16.15 | 26.78 |
| CDY40514 | Canola | nucleus | 16.08 | 26.6 |
| CDY37024 | Canola | cytosol, mitochondrion | 5.9 | 25.93 |
| CDY10756 | Canola | nucleus | 19.59 | 25.62 |
| CDY32278 | Canola | endoplasmic reticulum | 17.21 | 23.47 |
| CDY26898 | Canola | nucleus | 17.13 | 23.37 |
| CDX83624 | Canola | nucleus | 17.63 | 22.51 |
| CDY13640 | Canola | nucleus | 17.7 | 22.4 |
| CDX97797 | Canola | nucleus | 20.15 | 22.23 |
| CDY29644 | Canola | nucleus | 20.22 | 22.04 |
| CDY10215 | Canola | nucleus | 19.8 | 21.96 |
| CDY51663 | Canola | nucleus | 0.91 | 20.63 |
| CDX91491 | Canola | nucleus | 0.91 | 20.63 |
| CDY23802 | Canola | nucleus | 7.44 | 20.19 |
| CDX91151 | Canola | nucleus | 16.57 | 18.9 |
| CDX85676 | Canola | nucleus | 16.5 | 18.83 |
| CDY48353 | Canola | nucleus | 14.96 | 17.42 |
| CDY34159 | Canola | nucleus | 14.82 | 17.06 |
| CDX78376 | Canola | plastid | 16.71 | 13.55 |
| CDX81170 | Canola | plastid | 16.71 | 13.5 |
| CDX96996 | Canola | nucleus | 16.36 | 13.17 |
| CDX69841 | Canola | plastid | 16.22 | 13.07 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078GVJ1 | UniProt:A0A078GVJ1 | EnsemblPlants:CDY29164 |
| ProteinID:CDY29164 | ProteinID:CDY29164.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00042040001 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF190 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI0004EEBB86 | SEG:seg | : | : |
Description
BnaC09g15610DBnaC09g15610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GVJ1]
Coordinates
chrLK032232:+:291491..304440
Molecular Weight (calculated)
159226.0 Da
IEP (calculated)
6.326
GRAVY (calculated)
-0.451
Length
1424 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPKKKPQKQ SNKAASSSSS SSSKKKPSSG PKLQISAENE DRLRRLLLNS GRTAPPAAAP IHSALSKNQK AKKLNTVYEK LSCEGFVDDQ IELALSSLRD
0101: GATFETALDW LCLNLPSHEL PVKFSTGASR FPTGGGSVGV ILTSREDWNE SSDSSVELKQ EEPEVYVKVK GKQDEDALRS DQSSQADWIR QYMRRQEEEE
0201: LESWEDEVDG VGSSREASGP RAFDVIAKEY YSARSDAIKA KDKRDKKGQE QAGLAIRKLK QEIAALGISE AALESEFQRE YASEDATEKE IASPMPDNIH
0301: EAVDADSIQP LDEPVLDENP IENCGSEENQ PKDLPSCSPG QEVVASDDNS EYLALDDMFS VDVPHYEASP HELLELQKKE KMRELRSEEN LGKLEGIWKK
0401: GEAQKVPKAF LHQLCQRSGW DAPKFNKVTG EGRKISYTVS ILRKASGRGK SRQAGGLVTL QLPHQDEVFE SIEDAQNRVA AFALHKLFSD LPVHFAITEP
0501: YASLVLIWKQ EELFCTVQST EEDRRANFVD RLLESDNLSL SASSSGISDA VPMVDTYVKE KDDLGVARSN HRAKRDSYIE ATCLSLQQKQ ENKKKTRKYK
0601: DMLKTRTALP ISEVKNDILQ HLKERDVLVV CGETGSGKTT QVPQFILDDM IESGRGGYCN IICTQPRRIA AISVAQRVAD ERCESSPGSD DSLVGYQVRL
0701: ESARSDKTRL LFCTTGILLR KLAGDKTLND VTHIIVDEVH ERSLLGDFLL IILKSLIEKQ SCDNTSQRLK VILMSATVDA NLFSNYFAHC PVITAQGRTH
0801: PVTTHFLEEI YESTRYLLAP DSPAALRSDS SIKDKLGSVN DRRGKKNLVL AGWGDDYLLS EDCLNPFYVS GNYNSYSDQT QQNLKRLNED AIDYELLEEL
0901: ICHIDDTCNE GAILVFLPGV SEIHMLLDRL AASYRFRGPS ADWLLPLHSS IASTEQKRVF LRPPEDVRKV IIATNIAETS ITIDDVVYVI DSGKHKENRY
1001: NPQKKLSSMV EDWISQANAR QRTGRAGRVK PGICYSLYTR HRFEKLMRPY QALEPPSEGA IASAISLLHE VGAVEGDEEL TPLGHHLAKL PVDVLIGKML
1101: LYGGIFGCLS PILSIAAFLS YKSPFIYPKD EKQNVDRVKL ALFSDNMDKS SELNNNDKQS DHLLMMVAYD KWVKILNERG MKAAQRFCES KFLSSSVMRM
1201: IRDMRVQYGT LLADIGLINL PKTGEFAGRK KKNLDVWFSD QTQPFNMYSQ QPEVVKAILC AGLYPNIAAN DKGITETAVN SLTKQGNQTK SYSAWYDGRR
1301: EVYIHPSSIN SNFKAFQYPF LVFLEKVETN KVYLRDTTIV SPFSILLFGG SINVHHQSGS VTIDGWLKIA APAQTAVLFK ELRLTLHSIL KDLIRKPEIS
1401: GIVHNEVVKS MVHLLIEEGK PQHT
0101: GATFETALDW LCLNLPSHEL PVKFSTGASR FPTGGGSVGV ILTSREDWNE SSDSSVELKQ EEPEVYVKVK GKQDEDALRS DQSSQADWIR QYMRRQEEEE
0201: LESWEDEVDG VGSSREASGP RAFDVIAKEY YSARSDAIKA KDKRDKKGQE QAGLAIRKLK QEIAALGISE AALESEFQRE YASEDATEKE IASPMPDNIH
0301: EAVDADSIQP LDEPVLDENP IENCGSEENQ PKDLPSCSPG QEVVASDDNS EYLALDDMFS VDVPHYEASP HELLELQKKE KMRELRSEEN LGKLEGIWKK
0401: GEAQKVPKAF LHQLCQRSGW DAPKFNKVTG EGRKISYTVS ILRKASGRGK SRQAGGLVTL QLPHQDEVFE SIEDAQNRVA AFALHKLFSD LPVHFAITEP
0501: YASLVLIWKQ EELFCTVQST EEDRRANFVD RLLESDNLSL SASSSGISDA VPMVDTYVKE KDDLGVARSN HRAKRDSYIE ATCLSLQQKQ ENKKKTRKYK
0601: DMLKTRTALP ISEVKNDILQ HLKERDVLVV CGETGSGKTT QVPQFILDDM IESGRGGYCN IICTQPRRIA AISVAQRVAD ERCESSPGSD DSLVGYQVRL
0701: ESARSDKTRL LFCTTGILLR KLAGDKTLND VTHIIVDEVH ERSLLGDFLL IILKSLIEKQ SCDNTSQRLK VILMSATVDA NLFSNYFAHC PVITAQGRTH
0801: PVTTHFLEEI YESTRYLLAP DSPAALRSDS SIKDKLGSVN DRRGKKNLVL AGWGDDYLLS EDCLNPFYVS GNYNSYSDQT QQNLKRLNED AIDYELLEEL
0901: ICHIDDTCNE GAILVFLPGV SEIHMLLDRL AASYRFRGPS ADWLLPLHSS IASTEQKRVF LRPPEDVRKV IIATNIAETS ITIDDVVYVI DSGKHKENRY
1001: NPQKKLSSMV EDWISQANAR QRTGRAGRVK PGICYSLYTR HRFEKLMRPY QALEPPSEGA IASAISLLHE VGAVEGDEEL TPLGHHLAKL PVDVLIGKML
1101: LYGGIFGCLS PILSIAAFLS YKSPFIYPKD EKQNVDRVKL ALFSDNMDKS SELNNNDKQS DHLLMMVAYD KWVKILNERG MKAAQRFCES KFLSSSVMRM
1201: IRDMRVQYGT LLADIGLINL PKTGEFAGRK KKNLDVWFSD QTQPFNMYSQ QPEVVKAILC AGLYPNIAAN DKGITETAVN SLTKQGNQTK SYSAWYDGRR
1301: EVYIHPSSIN SNFKAFQYPF LVFLEKVETN KVYLRDTTIV SPFSILLFGG SINVHHQSGS VTIDGWLKIA APAQTAVLFK ELRLTLHSIL KDLIRKPEIS
1401: GIVHNEVVKS MVHLLIEEGK PQHT
0001: MAPKKKPQKQ SNKAASSSSS SKSNYQKPSS GPKLQISAEN EDRLRRLLLN SGRSGPSIPA PISNSLSKAQ KTKKLNNVYE KLSCEGFVDD QIELALSSLR
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
Arabidopsis Description
DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I9Q5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.