Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G304100.1 | Wheat | nucleus, plastid | 98.32 | 98.25 |
| TraesCS2D01G302700.1 | Wheat | plastid | 97.9 | 97.83 |
| Os04t0432200-00 | Rice | extracellular | 4.83 | 94.52 |
| KXG26332 | Sorghum | nucleus, plastid | 83.75 | 83.87 |
| Zm00001d003655_P006 | Maize | nucleus, plastid | 82.77 | 83.01 |
| GSMUA_Achr6P17860_001 | Banana | nucleus | 62.89 | 63.11 |
| VIT_12s0035g00800.t01 | Wine grape | nucleus | 53.29 | 55.59 |
| Solyc01g103690.2.1 | Tomato | nucleus | 54.83 | 54.45 |
| KRH01863 | Soybean | nucleus | 53.5 | 53.13 |
| CDY29164 | Canola | nucleus | 52.1 | 52.25 |
| CDY39917 | Canola | nucleus | 51.61 | 52.16 |
| AT1G58060.1 | Thale cress | nucleus | 53.22 | 52.09 |
| Bra027890.1-P | Field mustard | nucleus | 46.64 | 50.08 |
| AT1G58050.1 | Thale cress | nucleus | 48.39 | 48.77 |
| CDY63687 | Canola | nucleus, plastid | 33.19 | 42.7 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 25.28 | 35.01 |
| TraesCS7B01G060800.1 | Wheat | plastid | 15.2 | 30.43 |
| TraesCS5B01G392800.1 | Wheat | nucleus | 24.3 | 30.17 |
| TraesCS1B01G398400.1 | Wheat | cytosol | 8.12 | 29.37 |
| TraesCS4B01G180200.1 | Wheat | cytosol | 14.71 | 29.13 |
| TraesCS3B01G165500.1 | Wheat | nucleus | 14.29 | 29.1 |
| TraesCS4B01G075500.1 | Wheat | nucleus | 14.01 | 28.37 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 24.65 | 28.23 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 21.43 | 25.61 |
| TraesCS1B01G398100.1 | Wheat | cytosol | 11.69 | 24.24 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 17.72 | 24.19 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 17.51 | 23.58 |
| TraesCS7B01G245800.1 | Wheat | nucleus | 16.11 | 21.38 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 17.3 | 19.56 |
| TraesCS4B01G148500.1 | Wheat | nucleus | 16.88 | 19.53 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 14.92 | 16.56 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 14.57 | 15.77 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 15.62 | 13.71 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 16.18 | 13.32 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 11.2 | 12.09 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF190 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | EnsemblPlantsGene:TraesCS2B01G320800 | EnsemblPlants:TraesCS2B01G320800.1 | TIGR:cd00046 |
| TIGR:cd00079 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:457343084..457367066
Molecular Weight (calculated)
159133.0 Da
IEP (calculated)
6.966
GRAVY (calculated)
-0.385
Length
1428 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPKKKQPVS KQKHKPKPSA PSSSSAAPRL EISSENERRL RQLLLNSSAA SAPSPAPLDA PTARPESREQ KGRRLRGVYD KLALEGFSSS QIEQALSAIP
0101: DSATFESALD WLCFNLPGDE LPLKFASAAA SSSRAGTEGS VKVVSAAKDN WVPQSRGPVE EAKVSTEGLE IKIGRRQEED VTLDDGRSSQ AAWILQYMEQ
0201: QEEEEDANSN DSSTWEDRLA ASFEVAETKP SRRKKKGKKE NSKNGNSKDN ISQSVSLVLS NSEIASVEDG QIGLGASENK SPSLVHIDEG SNLQKEVPKN
0301: AGETCTKEVE EEEVELNNLF FEDSSVWEVV APEILKQQQI EKLSHDGYGH LLGNIDDVWK KGDCGKMPKA ILQKFCQKLG WDAPKYSKTS EKDGKFIYAV
0401: NVLRGSTGRG KSRKAGGLTK IQLPEKDEEY VSVQEAQSRV ATFALYQLFA DLPLRQLLIE PYSSLVLRWQ EGELEFSSTS RVLDTEDSRR AGFVDMLLDM
0501: DVHNTLPYQI RGAPEGSTSI DSPNDKETNS VYEKKEATLL NRAGSRPEQA ESTALKKQLE HKRKLPKYLK MLGARASLPI ARLKKHFLQL LKENDVIVVS
0601: GETGCGKTTQ VPQFILDDMI ESELGGNCNI VCTQPRRIAA ISVAERVSDE RCESSPGSKD SLVGYQVRLD SARNERTKLL FCTTGILLRK LSGNKDLSDV
0701: THVVVDEVHE RTILSDFLLI VLKSLVEKRS NQPGRKLKVI LMSATVDSSL FARYFGDCPV ISVEGRTHPV STHFLEDVYE KMEYCLALDS PASGAYYAQH
0801: GEKWKHASSS VNNRRGMKNL VMSSWGDESM LSENYVNPHY SSDCYQSYSE RTNLNLKRLN EDVIDFDLLE DLICYIDENC PSGAVLVFLP GVAEIEMLID
0901: RLSASVRFKG ASSDWILPLH SMLSPTDQRK VFQSPPENIR KVILATDIAE TSITIDDVVY VVDTGKHKEN RYNPQKKMSS IVEDWISRAN AKQRRGRAGR
1001: VRPGLCFCLY THHRFEKLMR PFQVPEMLRM PLTELCLQIK SLHLGDIKSF LLKAVEPPKE EAISSAIDLL FKVGAFEGHE ELSPLGYHLA KLPVDVLIGK
1101: MMLYGAIFGC LSPVLSVAAF LSYKSPFISP KDEKQNAEKA KAALSNENLD GSTSIIDNKQ SDHLLMVIAY NKWSRILQEH GARSAHQFCR SFYLNSTVMY
1201: MIRDMRLQYG SLLADIGLVD LPKDNLNQMN GNRKSNLESW FANISLPFNL YAGYTSVIKS VISAGLYPNV AATLEGVDPG ALGGRKPSDV LFGKDRPRWY
1301: DGRREVHIHP SSVNHSLKSV QYPFLVFLEK VETSKVFLRD TSVISPYSLL LFGGSMVIQH QAGVVIIDGW LRLTAAAQTA VLFKQLRITL DAVLKELTRK
1401: PEMATFVDNE VVRSIIHLLL EEEKAQQA
0101: DSATFESALD WLCFNLPGDE LPLKFASAAA SSSRAGTEGS VKVVSAAKDN WVPQSRGPVE EAKVSTEGLE IKIGRRQEED VTLDDGRSSQ AAWILQYMEQ
0201: QEEEEDANSN DSSTWEDRLA ASFEVAETKP SRRKKKGKKE NSKNGNSKDN ISQSVSLVLS NSEIASVEDG QIGLGASENK SPSLVHIDEG SNLQKEVPKN
0301: AGETCTKEVE EEEVELNNLF FEDSSVWEVV APEILKQQQI EKLSHDGYGH LLGNIDDVWK KGDCGKMPKA ILQKFCQKLG WDAPKYSKTS EKDGKFIYAV
0401: NVLRGSTGRG KSRKAGGLTK IQLPEKDEEY VSVQEAQSRV ATFALYQLFA DLPLRQLLIE PYSSLVLRWQ EGELEFSSTS RVLDTEDSRR AGFVDMLLDM
0501: DVHNTLPYQI RGAPEGSTSI DSPNDKETNS VYEKKEATLL NRAGSRPEQA ESTALKKQLE HKRKLPKYLK MLGARASLPI ARLKKHFLQL LKENDVIVVS
0601: GETGCGKTTQ VPQFILDDMI ESELGGNCNI VCTQPRRIAA ISVAERVSDE RCESSPGSKD SLVGYQVRLD SARNERTKLL FCTTGILLRK LSGNKDLSDV
0701: THVVVDEVHE RTILSDFLLI VLKSLVEKRS NQPGRKLKVI LMSATVDSSL FARYFGDCPV ISVEGRTHPV STHFLEDVYE KMEYCLALDS PASGAYYAQH
0801: GEKWKHASSS VNNRRGMKNL VMSSWGDESM LSENYVNPHY SSDCYQSYSE RTNLNLKRLN EDVIDFDLLE DLICYIDENC PSGAVLVFLP GVAEIEMLID
0901: RLSASVRFKG ASSDWILPLH SMLSPTDQRK VFQSPPENIR KVILATDIAE TSITIDDVVY VVDTGKHKEN RYNPQKKMSS IVEDWISRAN AKQRRGRAGR
1001: VRPGLCFCLY THHRFEKLMR PFQVPEMLRM PLTELCLQIK SLHLGDIKSF LLKAVEPPKE EAISSAIDLL FKVGAFEGHE ELSPLGYHLA KLPVDVLIGK
1101: MMLYGAIFGC LSPVLSVAAF LSYKSPFISP KDEKQNAEKA KAALSNENLD GSTSIIDNKQ SDHLLMVIAY NKWSRILQEH GARSAHQFCR SFYLNSTVMY
1201: MIRDMRLQYG SLLADIGLVD LPKDNLNQMN GNRKSNLESW FANISLPFNL YAGYTSVIKS VISAGLYPNV AATLEGVDPG ALGGRKPSDV LFGKDRPRWY
1301: DGRREVHIHP SSVNHSLKSV QYPFLVFLEK VETSKVFLRD TSVISPYSLL LFGGSMVIQH QAGVVIIDGW LRLTAAAQTA VLFKQLRITL DAVLKELTRK
1401: PEMATFVDNE VVRSIIHLLL EEEKAQQA
0001: MAPKKKPQKQ SNKAASSSSS SKSNYQKPSS GPKLQISAEN EDRLRRLLLN SGRSGPSIPA PISNSLSKAQ KTKKLNNVYE KLSCEGFVDD QIELALSSLR
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
Arabidopsis Description
DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I9Q5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.