Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G362600.1 | Wheat | nucleus | 99.04 | 99.04 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 32.6 | 92.92 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 94.36 | 91.39 |
| Zm00001d049980_P001 | Maize | plasma membrane | 59.94 | 89.83 |
| KXG30390 | Sorghum | nucleus | 88.43 | 88.43 |
| EES02741 | Sorghum | nucleus | 88.05 | 88.05 |
| GSMUA_Achr4P23370_001 | Banana | nucleus | 56.98 | 79.47 |
| Bra040328.1-P | Field mustard | cytosol, mitochondrion | 16.06 | 78.5 |
| Solyc03g115390.2.1 | Tomato | nucleus | 66.92 | 77.01 |
| CDY37024 | Canola | cytosol, mitochondrion | 23.8 | 76.85 |
| KRH69386 | Soybean | cytosol | 19.02 | 75.67 |
| KRH40933 | Soybean | cytosol | 43.88 | 75.37 |
| KRH54662 | Soybean | nucleus | 74.67 | 74.67 |
| VIT_17s0000g06950.t01 | Wine grape | nucleus | 75.14 | 74.57 |
| PGSC0003DMT400063370 | Potato | nucleus | 73.14 | 72.86 |
| KRH12910 | Soybean | cytosol, nucleus | 51.15 | 71.81 |
| AT1G32490.1 | Thale cress | cytosol | 70.55 | 70.69 |
| PGSC0003DMT400005723 | Potato | nucleus | 55.35 | 70.44 |
| Bra010168.1-P | Field mustard | nucleus | 69.6 | 69.73 |
| CDY26898 | Canola | nucleus | 69.5 | 69.64 |
| CDY32278 | Canola | endoplasmic reticulum | 69.12 | 69.25 |
| AT2G35340.1 | Thale cress | endoplasmic reticulum, nucleus | 68.36 | 68.49 |
| KRH74752 | Soybean | nucleus | 67.4 | 68.31 |
| TraesCS1B01G254900.1 | Wheat | nucleus | 67.69 | 66.79 |
| Solyc12g017700.1.1 | Tomato | nucleus | 55.07 | 65.01 |
| AT4G16680.2 | Thale cress | nucleus | 48.57 | 63.82 |
| CDY60185 | Canola | nucleus | 49.62 | 60.42 |
| CDY40514 | Canola | nucleus | 49.52 | 60.16 |
| Bra038498.1-P | Field mustard | nucleus | 51.24 | 59.49 |
| TraesCS4B01G180200.1 | Wheat | cytosol | 33.17 | 48.13 |
| TraesCS7B01G060800.1 | Wheat | plastid | 30.21 | 44.32 |
| TraesCS3B01G165500.1 | Wheat | nucleus | 29.64 | 44.22 |
| TraesCS1B01G398400.1 | Wheat | cytosol | 15.2 | 40.25 |
| TraesCS4B01G075500.1 | Wheat | nucleus | 26.29 | 39.01 |
| TraesCS7B01G245800.1 | Wheat | nucleus | 38.72 | 37.64 |
| TraesCS4B01G148500.1 | Wheat | nucleus | 42.54 | 36.06 |
| TraesCS1B01G398100.1 | Wheat | cytosol | 22.85 | 34.69 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 37.28 | 30.88 |
| TraesCS1B01G168700.3 | Wheat | nucleus | 24.86 | 25.22 |
| TraesCS5B01G392800.1 | Wheat | nucleus | 22.66 | 20.61 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 24.95 | 20.3 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 24.76 | 19.64 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 23.23 | 19.49 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 20.36 | 17.82 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 24.19 | 17.72 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 23.23 | 14.94 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 23.23 | 14.01 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 17.3 | 13.68 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | ncoils:Coil | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00271 | PFAM:PF04408 |
| PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS4B01G374800 | EnsemblPlants:TraesCS4B01G374800.1 |
| TIGR:cd00046 | TIGR:cd00079 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:-:658772209..658782171
Molecular Weight (calculated)
119210.0 Da
IEP (calculated)
5.520
GRAVY (calculated)
-0.627
Length
1046 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASDKQLRDW VSDKLMSIQG FSTSVLVHYV IGLAKDSSSA GDLVGKLVEY GFSSSAETSS FAADIYAKVP RKGRGVSNYQ KQEREAAKLV KKQSTYKLLA
0101: DEDDDEVDNH TASSASASSK SRKHFRRKAQ DQDDGKDDDE TTAHVSERSV RRRTEEVDDE DGDDTLDEEQ EILRDQQERA QLEKNMRERD AVHTRKLMER
0201: QLSKEEQEEL TRRSQALDKN DTSDLRNFSR QAYLQKRRDK KIDEIRDEIL DHEYIFQDVK LTPAEENDFR YKKKIYDLVK EHVESADDVA EYKMPEAYDM
0301: GEGVNQEKRF SVAMQRYKDP EGKDKMNPFA EQEAWEEHQI GKSKLEFGSK DRKRSSNEYQ FVFDDQIDFV KSSVIEGTQF EDDSDQETID AKDILKRELQ
0401: DERKTLPIYK FRDELLKAVD EYQVIVIVGE TGSGKTTQIP QYLHEAGYTA RGKVACTQPR RVAAMSVAAR VSQEMGVKLG HEVGYSIRFE DCTSEKTMIK
0501: YMTDGMLLRE FLGEPDLAGY SVVMVDEAHE RTLSTDILFG LVKDIARFRP DLKLLISSAT LDAEKFSDYF DSAPIFKIPG RRYPVEVHYT KAPEADYIDA
0601: AIVTILQIHV TQPPGDILVF LTGQEEIETV DEILKHKTRG LGTKIPELNI CPIYANLPTE LQAKIFEITP EGSRKVVLAT NIAETSLTID GIKYVIDPGF
0701: CKIKSYNPRT GMESLLINPI SKASANQRAG RSGRTGPGKC FRLYTSYNYM HDLEDNTVPE IQRTNLANVV LTLKSLGIHD LVNFDFMDPP PSEALLKALE
0801: QLFALSALNS RGELTKTGRR MAEFPLDPML SKMIVASEKY KCSDEVMSIA SMLSIGNSIF YRPKDKQVHA DNARLNFHTG NVGDHIALLN VYNSWRETDF
0901: STQWCYENYI QVRSMKRARD IRDQLEGLME RVEIEVCSNA SDLDAIKKAI TSGFFHHSAR LQKNGSYRTV KNPQTVFIHP SSGLAQLLPR WVIYHELVLT
1001: TKEYMRQVTE LKPEWLVEIA PHYYQLKDVD DAGSKKLPKG QGRAAL
0101: DEDDDEVDNH TASSASASSK SRKHFRRKAQ DQDDGKDDDE TTAHVSERSV RRRTEEVDDE DGDDTLDEEQ EILRDQQERA QLEKNMRERD AVHTRKLMER
0201: QLSKEEQEEL TRRSQALDKN DTSDLRNFSR QAYLQKRRDK KIDEIRDEIL DHEYIFQDVK LTPAEENDFR YKKKIYDLVK EHVESADDVA EYKMPEAYDM
0301: GEGVNQEKRF SVAMQRYKDP EGKDKMNPFA EQEAWEEHQI GKSKLEFGSK DRKRSSNEYQ FVFDDQIDFV KSSVIEGTQF EDDSDQETID AKDILKRELQ
0401: DERKTLPIYK FRDELLKAVD EYQVIVIVGE TGSGKTTQIP QYLHEAGYTA RGKVACTQPR RVAAMSVAAR VSQEMGVKLG HEVGYSIRFE DCTSEKTMIK
0501: YMTDGMLLRE FLGEPDLAGY SVVMVDEAHE RTLSTDILFG LVKDIARFRP DLKLLISSAT LDAEKFSDYF DSAPIFKIPG RRYPVEVHYT KAPEADYIDA
0601: AIVTILQIHV TQPPGDILVF LTGQEEIETV DEILKHKTRG LGTKIPELNI CPIYANLPTE LQAKIFEITP EGSRKVVLAT NIAETSLTID GIKYVIDPGF
0701: CKIKSYNPRT GMESLLINPI SKASANQRAG RSGRTGPGKC FRLYTSYNYM HDLEDNTVPE IQRTNLANVV LTLKSLGIHD LVNFDFMDPP PSEALLKALE
0801: QLFALSALNS RGELTKTGRR MAEFPLDPML SKMIVASEKY KCSDEVMSIA SMLSIGNSIF YRPKDKQVHA DNARLNFHTG NVGDHIALLN VYNSWRETDF
0901: STQWCYENYI QVRSMKRARD IRDQLEGLME RVEIEVCSNA SDLDAIKKAI TSGFFHHSAR LQKNGSYRTV KNPQTVFIHP SSGLAQLLPR WVIYHELVLT
1001: TKEYMRQVTE LKPEWLVEIA PHYYQLKDVD DAGSKKLPKG QGRAAL
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.