Factsheet for AT1G32490.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010168.1-P	Field mustard	nucleus	92.82	92.82
CDY26898	Canola	nucleus	92.72	92.72
CDY32278	Canola	endoplasmic reticulum	92.62	92.62
CDY37024	Canola	cytosol, mitochondrion	28.54	91.98
Bra040328.1-P	Field mustard	cytosol, mitochondrion	18.58	90.65
AT2G35340.1	Thale cress	endoplasmic reticulum, nucleus	83.43	83.43
Os08t0335000-00	Rice	cytosol, nucleus	28.74	81.74
GSMUA_Achr4P23370_001	Banana	nucleus	53.93	75.07
Zm00001d049980_P001	Maize	plasma membrane	50.0	74.79
TraesCS4D01G362600.1	Wheat	nucleus	70.79	70.65
TraesCS4B01G374800.1	Wheat	nucleus	70.69	70.55
KXG30390	Sorghum	nucleus	70.4	70.27
EES02741	Sorghum	nucleus	70.02	69.89
HORVU4Hr1G088270.17	Barley	mitochondrion	68.01	65.74
AT4G16680.2	Thale cress	nucleus	49.14	64.45
AT3G62310.1	Thale cress	nucleus	33.43	48.07
AT2G47250.1	Thale cress	nucleus	32.85	47.05
AT4G18465.1	Thale cress	nucleus	29.89	44.89
AT1G26370.1	Thale cress	plastid	29.21	42.54
AT1G27900.1	Thale cress	nucleus	26.72	39.86
AT5G14900.1	Thale cress	cytosol	10.82	37.54
AT3G26560.1	Thale cress	nucleus	40.04	35.79
AT5G13010.1	Thale cress	nucleus	37.26	31.0
AT2G35920.3	Thale cress	plastid	23.95	24.34
AT2G01130.1	Thale cress	nucleus	23.85	22.37
AT1G33390.2	Thale cress	nucleus	25.38	21.42
AT1G48650.2	Thale cress	nucleus, plastid	24.33	21.06
AT5G04895.1	Thale cress	mitochondrion	22.32	20.07
AT1G58060.1	Thale cress	nucleus	24.71	17.68
AT1G58050.1	Thale cress	nucleus	23.47	17.29
AT2G30800.1	Thale cress	nucleus	20.21	16.24
AT4G01020.1	Thale cress	nucleus	24.33	14.21
AT5G10370.1	Thale cress	nucleus	24.14	14.2
AT1G06670.1	Thale cress	nucleus	21.36	14.15

Protein Annotations

Gene3D:1.20.120.1080	MapMan:16.4.7.1.5	Gene3D:3.40.50.300	EntrezGene:840143	UniProt:A0A178W3A5	ProteinID:AAF81347.1
ProteinID:AEE31492.1	ArrayExpress:AT1G32490	EnsemblPlantsGene:AT1G32490	RefSeq:AT1G32490	TAIR:AT1G32490	RefSeq:AT1G32490-TAIR-G
EnsemblPlants:AT1G32490.1	TAIR:AT1G32490.1	EMBL:AY074318	EMBL:AY133872	Unigene:At.40132	ncoils:Coil
InterPro:DNA/RNA_helicase_DEAH_CS	InterPro:DUF1605	Symbol:EMB2733	Symbol:ESP3	GO:GO:0000166	GO:GO:0000398
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004004	GO:GO:0004386
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005681	GO:GO:0005737	GO:GO:0006139	GO:GO:0006397	GO:GO:0008150	GO:GO:0008152
GO:GO:0008380	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0035194	GO:GO:0040029
InterPro:Helicase-assoc_dom	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	RefSeq:NP_174527.2
ProteinID:OAP12980.1	InterPro:P-loop_NTPase	PFAM:PF00271	PFAM:PF04408	PFAM:PF07717	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS00690	PFscan:PS51192	PFscan:PS51194	PANTHER:PTHR18934	PANTHER:PTHR18934:SF117
UniProt:Q8VY00	SMART:SM00487	SMART:SM00490	SMART:SM00847	SUPFAM:SSF52540	UniParc:UPI00000A073D
SEG:seg	:	:	:	:	:

Description

ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]

Coordinates

chr1:-:11742006..11749783

Molecular Weight (calculated)

118838.0 Da

IEP (calculated)

5.920

GRAVY (calculated)

-0.580

Length

1044 amino acids

Sequence
(BLAST)

0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.