Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra010168.1-P | Field mustard | nucleus | 99.71 | 99.71 |
| CDY32278 | Canola | endoplasmic reticulum | 99.23 | 99.23 |
| CDY37024 | Canola | cytosol, mitochondrion | 29.02 | 93.52 |
| AT1G32490.1 | Thale cress | cytosol | 92.72 | 92.72 |
| Os08t0335000-00 | Rice | cytosol, nucleus | 28.64 | 81.47 |
| GSMUA_Achr4P23370_001 | Banana | nucleus | 54.6 | 76.0 |
| Zm00001d049980_P001 | Maize | plasma membrane | 50.0 | 74.79 |
| KXG30390 | Sorghum | nucleus | 70.31 | 70.17 |
| EES02741 | Sorghum | nucleus | 69.83 | 69.69 |
| TraesCS4B01G374800.1 | Wheat | nucleus | 69.64 | 69.5 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 69.44 | 69.31 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 67.05 | 64.81 |
| CDY60185 | Canola | nucleus | 51.63 | 62.75 |
| CDY40514 | Canola | nucleus | 51.25 | 62.14 |
| CDX74061 | Canola | cytosol | 15.33 | 49.84 |
| CDY68405 | Canola | nucleus | 31.9 | 49.7 |
| CDX76626 | Canola | nucleus | 33.52 | 48.75 |
| CDY11413 | Canola | nucleus | 33.33 | 48.47 |
| CDX74059 | Canola | nucleus | 12.16 | 48.11 |
| CDY23338 | Canola | cytosol | 18.97 | 46.92 |
| CDX83337 | Canola | cytosol | 32.38 | 46.75 |
| CDX95715 | Canola | cytosol | 32.38 | 46.62 |
| CDY36075 | Canola | nucleus | 28.54 | 44.21 |
| CDY34567 | Canola | nucleus | 27.87 | 43.89 |
| CDX78859 | Canola | nucleus | 29.31 | 43.84 |
| CDX99466 | Canola | nucleus | 29.31 | 43.71 |
| CDX85017 | Canola | cytosol, plastid | 29.79 | 43.07 |
| CDY16154 | Canola | nucleus, plastid | 29.5 | 42.6 |
| CDY32702 | Canola | nucleus | 27.49 | 41.47 |
| CDY02818 | Canola | nucleus | 26.25 | 41.27 |
| CDY11762 | Canola | nucleus | 27.2 | 40.34 |
| CDX90112 | Canola | nucleus | 27.11 | 40.14 |
| CDX83624 | Canola | nucleus | 40.04 | 37.49 |
| CDY13640 | Canola | nucleus | 40.23 | 37.33 |
| CDY23802 | Canola | nucleus | 16.57 | 32.95 |
| CDX91151 | Canola | nucleus | 36.59 | 30.58 |
| CDX85676 | Canola | nucleus | 36.49 | 30.53 |
| CDY51663 | Canola | nucleus | 1.72 | 28.57 |
| CDX91491 | Canola | nucleus | 1.72 | 28.57 |
| CDX84588 | Canola | plastid, vacuole | 24.14 | 24.35 |
| CDX79642 | Canola | nucleus, vacuole | 24.14 | 24.35 |
| CDY17694 | Canola | nucleus | 24.23 | 22.29 |
| CDY57512 | Canola | nucleus | 24.04 | 22.11 |
| CDY40601 | Canola | nucleus, plastid | 24.9 | 22.02 |
| CDX93688 | Canola | plastid | 24.81 | 21.95 |
| CDY48353 | Canola | nucleus | 25.19 | 21.5 |
| CDY34159 | Canola | nucleus | 25.29 | 21.34 |
| CDX70187 | Canola | mitochondrion | 22.99 | 20.76 |
| CDX98799 | Canola | mitochondrion | 22.89 | 20.71 |
| CDY10756 | Canola | nucleus | 20.11 | 19.28 |
| CDY39917 | Canola | nucleus | 23.37 | 17.27 |
| CDY29164 | Canola | nucleus | 23.37 | 17.13 |
| CDY10215 | Canola | nucleus | 20.69 | 16.82 |
| CDY63687 | Canola | nucleus, plastid | 17.43 | 16.4 |
| CDX97797 | Canola | nucleus | 20.21 | 16.34 |
| CDY29644 | Canola | nucleus | 20.21 | 16.14 |
| CDX96996 | Canola | nucleus | 24.43 | 14.41 |
| CDX69841 | Canola | plastid | 24.33 | 14.37 |
| CDX78376 | Canola | plastid | 23.95 | 14.23 |
| CDX81170 | Canola | plastid | 23.85 | 14.12 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | GO:A0A078GQH0 | UniProt:A0A078GQH0 | EnsemblPlants:CDY26898 |
| ProteinID:CDY26898 | ProteinID:CDY26898.1 | ncoils:Coil | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 |
| EnsemblPlantsGene:GSBRNA2T00036600001 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 |
| InterPro:P-loop_NTPase | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 |
| SUPFAM:SSF52540 | UniParc:UPI0004EE111C | SEG:seg | : | : | : |
Description
BnaA05g18140DBnaA05g18140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GQH0]
Coordinates
chrLK032196:-:9527..16869
Molecular Weight (calculated)
118965.0 Da
IEP (calculated)
5.299
GRAVY (calculated)
-0.622
Length
1044 amino acids
Sequence
(BLAST)
(BLAST)
0001: MASNDLKTWV SDKLMGLLGY SQITLVNYVI VKAKQSKSPA ELVGVLMDNG FASSGDTRSF AEEIFARVPH QTAAVNLYQQ REAEAAMLVR KQQTYALIDD
0101: DDDDEDEVVK EKKPSASESK KSSKGKKRFR KKSGPSDDSD EEVPVREDSR HVRRKVSEDE DDGSESEEER VRDQKEKEEL EQHIRDRDTA RTRKLTEQKL
0201: SKKEQEEALR RANALEEDDL NSLRKVSRQE YLRKREQKKL EELRDEIEDE QYLFADEKLT ETELREFRYK KELYDLVKKR TQDEDNVEEY RIPDAYDDQE
0301: GGVDQEKRFA VAVQRYKDLD SREKMDPFAE QEAWEDHQIG KARLKFGSKN KKASDDYQFV FEDQINFIKE SVMAGENYED DMHPKEAQDA AEKTALEELQ
0401: EVRKSLPIYG YREQLLQAVE EHQVLVIVGD TGSGKTTQIP QYLHEAGYTK RGKVGCTQPR RVAAMSVAAR VAQEMGVKLG HEVGYSIRFE DCTSDKTVLK
0501: YMTDGMLLRE LLGEPDLASY SVVIVDEAHE RTLSTDILFG LDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINFTSA PEADYMDAAI
0601: VTVLTIHVRE PLGDILVFLT GQEEIETAEE ILKQRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSAGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKALELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSVGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNYST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIEISSNMNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQRKDVEDD ASKKMPKGAG KAAI
0101: DDDDEDEVVK EKKPSASESK KSSKGKKRFR KKSGPSDDSD EEVPVREDSR HVRRKVSEDE DDGSESEEER VRDQKEKEEL EQHIRDRDTA RTRKLTEQKL
0201: SKKEQEEALR RANALEEDDL NSLRKVSRQE YLRKREQKKL EELRDEIEDE QYLFADEKLT ETELREFRYK KELYDLVKKR TQDEDNVEEY RIPDAYDDQE
0301: GGVDQEKRFA VAVQRYKDLD SREKMDPFAE QEAWEDHQIG KARLKFGSKN KKASDDYQFV FEDQINFIKE SVMAGENYED DMHPKEAQDA AEKTALEELQ
0401: EVRKSLPIYG YREQLLQAVE EHQVLVIVGD TGSGKTTQIP QYLHEAGYTK RGKVGCTQPR RVAAMSVAAR VAQEMGVKLG HEVGYSIRFE DCTSDKTVLK
0501: YMTDGMLLRE LLGEPDLASY SVVIVDEAHE RTLSTDILFG LDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINFTSA PEADYMDAAI
0601: VTVLTIHVRE PLGDILVFLT GQEEIETAEE ILKQRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSAGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKALELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSVGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNYST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIEISSNMNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQRKDVEDD ASKKMPKGAG KAAI
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.