Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51663 | Canola | nucleus | 14.22 | 95.24 |
| CDX91491 | Canola | nucleus | 13.98 | 93.65 |
| Os02t0301500-01 | Rice | nucleus | 70.62 | 54.58 |
| Bra040091.1-P | Field mustard | nucleus | 97.39 | 51.96 |
| PGSC0003DMT400084916 | Potato | nucleus | 87.68 | 46.19 |
| CDY37024 | Canola | cytosol, mitochondrion | 30.57 | 39.81 |
| GSMUA_Achr10P... | Banana | nucleus | 85.31 | 36.92 |
| CDX83624 | Canola | nucleus | 94.08 | 35.61 |
| CDY13640 | Canola | nucleus | 94.55 | 35.47 |
| AT3G26560.1 | Thale cress | nucleus | 93.84 | 33.9 |
| Solyc01g110990.2.1 | Tomato | nucleus | 87.44 | 33.21 |
| VIT_08s0056g00470.t01 | Wine grape | nucleus | 91.47 | 32.85 |
| EES15324 | Sorghum | nucleus | 80.81 | 31.84 |
| Os06t0343100-01 | Rice | nucleus | 81.28 | 31.64 |
| Solyc07g039550.2.1 | Tomato | nucleus | 88.86 | 31.51 |
| TraesCS7D01G341800.1 | Wheat | nucleus | 78.67 | 30.68 |
| TraesCS7B01G245800.1 | Wheat | nucleus | 78.2 | 30.67 |
| Zm00001d015893_P001 | Maize | nucleus, plasma membrane | 89.81 | 30.66 |
| EER95349 | Sorghum | nucleus | 89.57 | 30.43 |
| TraesCS4B01G148500.1 | Wheat | nucleus | 88.86 | 30.39 |
| TraesCS4A01G158200.1 | Wheat | nucleus | 88.63 | 30.31 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 88.39 | 30.03 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 88.86 | 29.09 |
| PGSC0003DMT400056692 | Potato | nucleus | 77.73 | 28.75 |
| CDY11413 | Canola | nucleus | 45.26 | 26.6 |
| CDY68405 | Canola | nucleus | 42.18 | 26.57 |
| CDX83337 | Canola | cytosol | 45.26 | 26.42 |
| CDX95715 | Canola | cytosol | 45.26 | 26.34 |
| CDX76626 | Canola | nucleus | 44.79 | 26.32 |
| Zm00001d031581_P002 | Maize | nucleus | 80.33 | 25.6 |
| CDX78859 | Canola | nucleus | 40.28 | 24.36 |
| CDX99466 | Canola | nucleus | 40.28 | 24.29 |
| CDY60185 | Canola | nucleus | 46.92 | 23.05 |
| CDY40514 | Canola | nucleus | 46.45 | 22.76 |
| CDX90112 | Canola | nucleus | 37.68 | 22.55 |
| CDY11762 | Canola | nucleus | 37.44 | 22.44 |
| CDY23802 | Canola | nucleus | 27.73 | 22.29 |
| CDY36075 | Canola | nucleus | 35.55 | 22.26 |
| CDY34567 | Canola | nucleus | 34.6 | 22.02 |
| CDY02818 | Canola | nucleus | 34.12 | 21.69 |
| CDX85017 | Canola | cytosol, plastid | 36.73 | 21.47 |
| CDY16154 | Canola | nucleus, plastid | 36.26 | 21.16 |
| CDY32702 | Canola | nucleus | 33.89 | 20.66 |
| CDY26898 | Canola | nucleus | 46.92 | 18.97 |
| CDY32278 | Canola | endoplasmic reticulum | 46.92 | 18.97 |
| CDX85676 | Canola | nucleus | 47.16 | 15.95 |
| CDX74059 | Canola | nucleus | 9.95 | 15.91 |
| CDX91151 | Canola | nucleus | 46.92 | 15.85 |
| CDX74061 | Canola | cytosol | 10.43 | 13.71 |
| CDX79642 | Canola | nucleus, vacuole | 30.81 | 12.56 |
| CDX84588 | Canola | plastid, vacuole | 30.57 | 12.46 |
| CDX70187 | Canola | mitochondrion | 30.09 | 10.99 |
| CDX98799 | Canola | mitochondrion | 29.86 | 10.92 |
| CDY40601 | Canola | nucleus, plastid | 30.33 | 10.84 |
| CDY17694 | Canola | nucleus | 29.15 | 10.84 |
| CDX93688 | Canola | plastid | 30.09 | 10.76 |
| CDY57512 | Canola | nucleus | 28.91 | 10.75 |
| CDY10756 | Canola | nucleus | 27.49 | 10.65 |
| CDY34159 | Canola | nucleus | 30.81 | 10.51 |
| CDY48353 | Canola | nucleus | 30.33 | 10.47 |
| CDX97797 | Canola | nucleus | 27.25 | 8.91 |
| CDY29644 | Canola | nucleus | 27.49 | 8.88 |
| CDY29164 | Canola | nucleus | 27.96 | 8.29 |
| CDY39917 | Canola | nucleus | 27.73 | 8.28 |
| CDY10215 | Canola | nucleus | 24.88 | 8.18 |
| CDX81170 | Canola | plastid | 32.7 | 7.83 |
| CDX78376 | Canola | plastid | 32.46 | 7.8 |
| CDX69841 | Canola | plastid | 32.46 | 7.75 |
| CDX96996 | Canola | nucleus | 32.46 | 7.74 |
| CDY63687 | Canola | nucleus, plastid | 17.3 | 6.58 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078GFD7 | UniProt:A0A078GFD7 | EnsemblPlants:CDY23338 |
| ProteinID:CDY23338 | ProteinID:CDY23338.1 | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00021928001 | InterPro:Helicase-assoc_dom |
| InterPro:P-loop_NTPase | PFAM:PF04408 | PFAM:PF07717 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF120 | SMART:SM00847 |
| SUPFAM:SSF52540 | UniParc:UPI0004EF0FBB | SEG:seg | : | : | : |
Description
BnaA08g12080DBnaA08g12080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GFD7]
Coordinates
chrLK032142:+:591028..593141
Molecular Weight (calculated)
48231.2 Da
IEP (calculated)
10.118
GRAVY (calculated)
-0.545
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MPEWKKDAFG RTPTLGQRSK LSIQEQRESL PIYKLKTELI QAVHDNQVLV VIGETGSGKT TQVTQYLAEA GYTTKGKIGC TQPRRVAATS RAGRAGRTGP
101: GKCYRLYTES AYRNEMPPTS IPEIQRSNLA TTTLTMKAMG INDLLSFDFM DPPQPQALIS AMEQLYSLGA LDGEGLLTNL GRKMSEFPLE PPLSKMLLAS
201: VDLGCSDEIL TMIAMIQTDN VFYRPREKQA QADQKKAKFF QPEGDHFTLL AVYEAWKAKN FSGPWCSENF IQSRSLRRAQ DVRKQLLSIM DKHKLDVVSA
301: GKNFTKIRKA ITAGFFFHVA RKDPQEGYRT LVENQPVYIH PGSALFQRKP DWVIYHDLVM TTKEYMRQVT VIDPRWLVEL APRFFKVADP THMSKRKRQE
401: RIEPLYDRYH EPNSWRLSKR RG
101: GKCYRLYTES AYRNEMPPTS IPEIQRSNLA TTTLTMKAMG INDLLSFDFM DPPQPQALIS AMEQLYSLGA LDGEGLLTNL GRKMSEFPLE PPLSKMLLAS
201: VDLGCSDEIL TMIAMIQTDN VFYRPREKQA QADQKKAKFF QPEGDHFTLL AVYEAWKAKN FSGPWCSENF IQSRSLRRAQ DVRKQLLSIM DKHKLDVVSA
301: GKNFTKIRKA ITAGFFFHVA RKDPQEGYRT LVENQPVYIH PGSALFQRKP DWVIYHDLVM TTKEYMRQVT VIDPRWLVEL APRFFKVADP THMSKRKRQE
401: RIEPLYDRYH EPNSWRLSKR RG
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.