Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G245800.1 | Wheat | nucleus | 96.49 | 97.03 |
| CDY51663 | Canola | nucleus | 4.81 | 82.54 |
| CDX91491 | Canola | nucleus | 4.71 | 80.95 |
| PGSC0003DMT400084916 | Potato | nucleus | 58.41 | 78.9 |
| CDY23338 | Canola | cytosol | 30.68 | 78.67 |
| Os06t0343100-01 | Rice | nucleus | 78.47 | 78.32 |
| EES15324 | Sorghum | nucleus | 76.06 | 76.84 |
| KRG97372 | Soybean | nucleus | 63.96 | 71.56 |
| GSMUA_Achr10P... | Banana | nucleus | 61.92 | 68.72 |
| CDX83624 | Canola | nucleus | 70.52 | 68.43 |
| CDY13640 | Canola | nucleus | 70.7 | 68.0 |
| AT3G26560.1 | Thale cress | nucleus | 71.07 | 65.84 |
| VIT_08s0056g00470.t01 | Wine grape | nucleus | 71.44 | 65.79 |
| Bra040091.1-P | Field mustard | nucleus | 47.78 | 65.36 |
| Bra025211.1-P | Field mustard | nucleus | 70.7 | 65.33 |
| Solyc01g110990.2.1 | Tomato | nucleus | 67.01 | 65.26 |
| KRH05918 | Soybean | nucleus | 72.0 | 65.08 |
| KRH17401 | Soybean | nucleus | 72.27 | 65.0 |
| Solyc07g039550.2.1 | Tomato | nucleus | 71.16 | 64.71 |
| PGSC0003DMT400056692 | Potato | nucleus | 67.01 | 63.54 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 74.12 | 62.22 |
| Zm00001d031581_P002 | Maize | nucleus | 74.77 | 61.1 |
| TraesCS4D01G181700.1 | Wheat | cytosol | 31.98 | 47.99 |
| TraesCS3D01G148100.1 | Wheat | nucleus | 29.76 | 45.93 |
| TraesCS7D01G157100.1 | Wheat | plastid | 28.47 | 43.2 |
| TraesCS3D01G264900.1 | Wheat | plastid | 34.29 | 40.28 |
| TraesCS4D01G074200.1 | Wheat | nucleus | 25.79 | 39.57 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 37.71 | 39.01 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 37.15 | 37.89 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 35.58 | 27.44 |
| TraesCS1D01G148100.2 | Wheat | nucleus | 24.77 | 26.04 |
| TraesCS5D01G397600.1 | Wheat | nucleus | 23.2 | 21.83 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 23.2 | 20.21 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 24.58 | 20.06 |
| TraesCS3D01G112900.1 | Wheat | nucleus | 22.46 | 18.18 |
| TraesCS3D01G302800.2 | Wheat | plastid | 20.06 | 17.03 |
| TraesCS2D01G302700.1 | Wheat | plastid | 21.26 | 16.1 |
| TraesCS5D01G087800.2 | Wheat | nucleus | 22.92 | 14.81 |
| TraesCS2D01G171200.2 | Wheat | nucleus | 22.83 | 14.15 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:2.40.50.140 | Gene3D:3.40.50.300 | MapMan:35.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR003029 | InterPro:IPR014001 | InterPro:NA-bd_OB-fold | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00575 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS50126 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF120 | InterPro:S1_dom |
| InterPro:S1_domain | SMART:SM00316 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF50249 |
| SUPFAM:SSF52540 | EnsemblPlantsGene:TraesCS7D01G341800 | EnsemblPlants:TraesCS7D01G341800.1 | TIGR:cd00046 | TIGR:cd00079 | SEG:seg |
Description
No Description!
Coordinates
chr7D:-:437427803..437431051
Molecular Weight (calculated)
120970.0 Da
IEP (calculated)
6.450
GRAVY (calculated)
-0.417
Length
1082 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTKASPADAV SEGIRRLTYL SLVSKVSSEL EAHLGDVQRN VAEFIVHLGR ASPSVAEFDA KLKDHDFVVP DYLARTLHTV IHAIPDAAPA PAPAPAPAPA
0101: PAPRNPTADG LSTGTRSPDD KEEEEEEDGA GGPELHQVCH GTVIRVVDAG CFVRLDGARG REGLVHTSRM PASVKRGQEV FVKVVSVQWG NLELSMADID
0201: QETGRALPPP RRDGQDAVRR ANRSADPAGT SGKRIGLSGI VIEEDGARPA PRRPVRRMSS PERWELKQLI ASGALNVRDC PAFDDDDWGI HYQEEEEVEE
0301: ELEIELNEDE PPFLSGQGRS SIDLSPVRIS KNPEGSLSRV AALQTALVKE RRDIRSQEQR ALLDSIPKDL NRQWEDPLPD AGGRCLAQEM RGAGLSAQSM
0401: PDWKKQAYGK TGTFGKRSSL PIQEQRQHLP IYRLKNELIK ALHHHQVLVV IGETGSGKTT QVTQYLAEAG YTEGGKIACT QPRRVAAQSV AKRVAEEFGC
0501: PLGEEVGYSI RFDDRTGPDT VIKYMTDGML LREIMVDKNL SCYSVVMLDE AHERTIYTDI LFGLLKQLIR RRTDLKLIVT SATLDAEKFS RYFFNCNIFT
0601: IPGRTFPVEI LYAKEPESDY MDAALITVLQ IHLSQPEGDI LLFLTGQEEI DQACNSLHER MKVLGNDVPE LLVNPVYSAL PTEMQSKIFE PAPLGKRKVI
0701: VATNIAEASI TIDGIYYVVD PGFAKLNVYN PKRGLDSLVI TPISQASAKQ RAGRAGRTGP GKCYRLYTES AYRNEMPATT IPEIQRINLG WTVLNMKAMG
0801: INELVSFDFM DPPAPQALIS AMEQLYSLGA LDEEGLLTKL GRKMAEFPQE PPLSKMLLAS VDLGCSDEIV TIIAMIQTGN IFYRPREKQD QADRKRGNFF
0901: QPEGDHITLL TVYQAWKAKQ FSGPWCFENF LQITSLRRAQ DVRKQLLEIM DRYRLDVVSA GNDLTKVRRA IAAGFFFNSA KKDPQGGYRT LADHQQVYIH
1001: PSSALFHQQP EWVIYNEIVM TTKEYMREVT AINPAWLVEL APRFYRSMDS TKMSKRKRQE RIEPLYDRYN EPNSWRLSKR RG
0101: PAPRNPTADG LSTGTRSPDD KEEEEEEDGA GGPELHQVCH GTVIRVVDAG CFVRLDGARG REGLVHTSRM PASVKRGQEV FVKVVSVQWG NLELSMADID
0201: QETGRALPPP RRDGQDAVRR ANRSADPAGT SGKRIGLSGI VIEEDGARPA PRRPVRRMSS PERWELKQLI ASGALNVRDC PAFDDDDWGI HYQEEEEVEE
0301: ELEIELNEDE PPFLSGQGRS SIDLSPVRIS KNPEGSLSRV AALQTALVKE RRDIRSQEQR ALLDSIPKDL NRQWEDPLPD AGGRCLAQEM RGAGLSAQSM
0401: PDWKKQAYGK TGTFGKRSSL PIQEQRQHLP IYRLKNELIK ALHHHQVLVV IGETGSGKTT QVTQYLAEAG YTEGGKIACT QPRRVAAQSV AKRVAEEFGC
0501: PLGEEVGYSI RFDDRTGPDT VIKYMTDGML LREIMVDKNL SCYSVVMLDE AHERTIYTDI LFGLLKQLIR RRTDLKLIVT SATLDAEKFS RYFFNCNIFT
0601: IPGRTFPVEI LYAKEPESDY MDAALITVLQ IHLSQPEGDI LLFLTGQEEI DQACNSLHER MKVLGNDVPE LLVNPVYSAL PTEMQSKIFE PAPLGKRKVI
0701: VATNIAEASI TIDGIYYVVD PGFAKLNVYN PKRGLDSLVI TPISQASAKQ RAGRAGRTGP GKCYRLYTES AYRNEMPATT IPEIQRINLG WTVLNMKAMG
0801: INELVSFDFM DPPAPQALIS AMEQLYSLGA LDEEGLLTKL GRKMAEFPQE PPLSKMLLAS VDLGCSDEIV TIIAMIQTGN IFYRPREKQD QADRKRGNFF
0901: QPEGDHITLL TVYQAWKAKQ FSGPWCFENF LQITSLRRAQ DVRKQLLEIM DRYRLDVVSA GNDLTKVRRA IAAGFFFNSA KKDPQGGYRT LADHQQVYIH
1001: PSSALFHQQP EWVIYNEIVM TTKEYMREVT AINPAWLVEL APRFYRSMDS TKMSKRKRQE RIEPLYDRYN EPNSWRLSKR RG
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.