Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G021300.1 | Wheat | extracellular | 97.67 | 97.51 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 97.42 | 97.03 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 96.54 | 96.15 |
| Os01t0118100-01 | Rice | cytosol, mitochondrion, nucleus | 59.66 | 90.59 |
| KXG32067 | Sorghum | mitochondrion | 86.8 | 86.87 |
| VIT_17s0000g03030.t01 | Wine grape | nucleus | 64.33 | 75.59 |
| Zm00001d040082_P003 | Maize | plastid | 82.77 | 73.06 |
| GSMUA_Achr3P20920_001 | Banana | mitochondrion, nucleus | 71.42 | 70.9 |
| KRH60477 | Soybean | plastid | 64.09 | 67.46 |
| KRH41772 | Soybean | plastid | 63.61 | 67.12 |
| CDY40601 | Canola | nucleus, plastid | 63.04 | 66.3 |
| Bra018747.1-P | Field mustard | plastid | 62.88 | 66.19 |
| CDX93688 | Canola | plastid | 62.88 | 66.19 |
| AT1G48650.2 | Thale cress | nucleus, plastid | 63.37 | 65.26 |
| Solyc03g118920.2.1 | Tomato | mitochondrion, nucleus | 62.96 | 65.11 |
| TraesCS5D01G397600.1 | Wheat | nucleus | 54.75 | 59.13 |
| TraesCS1D01G148100.2 | Wheat | nucleus | 36.63 | 44.22 |
| TraesCS4D01G181700.1 | Wheat | cytosol | 18.44 | 31.76 |
| TraesCS3D01G148100.1 | Wheat | nucleus | 17.71 | 31.38 |
| TraesCS4D01G074200.1 | Wheat | nucleus | 16.75 | 29.5 |
| TraesCS7D01G157100.1 | Wheat | plastid | 16.43 | 28.61 |
| TraesCS3D01G302800.2 | Wheat | plastid | 26.97 | 26.3 |
| TraesCS3D01G264900.1 | Wheat | plastid | 18.04 | 24.32 |
| TraesCS2D01G302700.1 | Wheat | plastid | 27.46 | 23.86 |
| TraesCS7D01G341800.1 | Wheat | nucleus | 20.21 | 23.2 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 19.4 | 23.04 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 18.92 | 22.15 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 21.26 | 20.48 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 18.84 | 16.68 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 17.55 | 16.44 |
| TraesCS3D01G112900.1 | Wheat | nucleus | 16.83 | 15.63 |
| TraesCS5D01G087800.2 | Wheat | nucleus | 19.32 | 14.33 |
| TraesCS2D01G171200.2 | Wheat | nucleus | 19.4 | 13.8 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR014720 | InterPro:P-loop_NTPase | PFAM:PF00035 | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF192 |
| SMART:SM00358 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| EnsemblPlantsGene:TraesCS3D01G025600 | EnsemblPlants:TraesCS3D01G025600.1 | TIGR:cd00046 | TIGR:cd00048 | InterPro:dsRBD_dom | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:8838582..8847692
Molecular Weight (calculated)
139163.0 Da
IEP (calculated)
9.013
GRAVY (calculated)
-0.435
Length
1242 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLASSVLRG RLRPLRRPRP LIMPSPLFLS RNPSPSTSSS TSLASPTPAS AAMSTSGVYV PPMRRLRSVI ASTNGNLAPP PAVQPAWTPE WRADGRSLSP
0101: PSPPQPQQRR TAALPPRPPP PQTHPLRQQS AGYSRYAYDD FSEEESDREM DRTSVSSKGG ASTLENVDEW KWKLHMLLRN DNEQEIMSRE KKDRRDFDQL
0201: AQLADRMGLH SRQYSRIIVF SKAPLPNYRS DLDDKRPQRE VSIPSGLQRE VDALLADYLA RKRTDSGNFP NAAFSRSSST DSFATDESFY EQQDNQTSTN
0301: VVMERIQRRK SLQLRNQQAA WQESNDGQSM MEFRRSLPAQ KERQSLLEAI SQNQVVVVSG ETGCGKTTQL PQYILESEIE AARGATCSII CTQPRRISAI
0401: SVSERVAAER GEKIGESVGY KVRLEGMRGR DTRLLFCTTG VLLRRLLVDR SLKGVTHVIV DEIHERGMNE DFLLIVLKDL LPRRPELRLV LMSATLNAEM
0501: FSSYFGGAPM IHIPGFTYPV RSRFLEDILE VTGHRLTPYN QIDDYGQEKS WKMQKQALRK RKSQIASVVE DAVKAADLRD YSPQTRDSLS CWNPDSIGFN
0601: LIENVLCHIC QKERDGAVLV FMTGWDDINT LKDQLQSNPL LGDPSKVLLL ACHGSMASSE QKLIFDKPEP GVRKIVLATN LAETSITIND VVFVVDCGKA
0701: KETSYDALNN TPCLLPTWIS KASARQRRGR AGRVQSGECF HLYPQCVYNV FADYQLPELL RTPLQSLCLQ IKSLRLGSIS EFLSRALQSP ESLSVQNAIE
0801: YLKVIGAFDQ NEELTVLGKH LSMLPVEPKL GKMLIFGAIF NCLDPILTPS LLDLAVLPSS MQLAESAKLQ FSCRDYSDHL AIVRAYDGWR EAERDRNGYD
0901: YCWRNFLSAQ TLKALDSLRR QFLFLLKDTG LIDENMTMCN KWSRDENLVR AIICAGLYPG VSSVVNKEKS VSLKTMEDGQ VMLYSSSVNG KEAKIPFPWL
1001: VFNEKVKVNS VFLRDSTAIS DSILLLFGGN IQQGGLDGHL KMLGGYLEFF MSRDLASTYL NLKGELENLI HCKLQNPRID IQTSEELLSA VRLLVTEDPC
1101: SGRFVYGRQE PRSKKAKTMI SSASVVPMDR GGGGGQGGDN PKNQLQTLLT RAGHDNPSYK TKQIKNTLFR STVEFNGMQF VGQPCANKKL AEKDAAGEAI
1201: SWLTGGEAPP VTANARDRQD ADHMSVLTKP APRRRRHHHR RS
0101: PSPPQPQQRR TAALPPRPPP PQTHPLRQQS AGYSRYAYDD FSEEESDREM DRTSVSSKGG ASTLENVDEW KWKLHMLLRN DNEQEIMSRE KKDRRDFDQL
0201: AQLADRMGLH SRQYSRIIVF SKAPLPNYRS DLDDKRPQRE VSIPSGLQRE VDALLADYLA RKRTDSGNFP NAAFSRSSST DSFATDESFY EQQDNQTSTN
0301: VVMERIQRRK SLQLRNQQAA WQESNDGQSM MEFRRSLPAQ KERQSLLEAI SQNQVVVVSG ETGCGKTTQL PQYILESEIE AARGATCSII CTQPRRISAI
0401: SVSERVAAER GEKIGESVGY KVRLEGMRGR DTRLLFCTTG VLLRRLLVDR SLKGVTHVIV DEIHERGMNE DFLLIVLKDL LPRRPELRLV LMSATLNAEM
0501: FSSYFGGAPM IHIPGFTYPV RSRFLEDILE VTGHRLTPYN QIDDYGQEKS WKMQKQALRK RKSQIASVVE DAVKAADLRD YSPQTRDSLS CWNPDSIGFN
0601: LIENVLCHIC QKERDGAVLV FMTGWDDINT LKDQLQSNPL LGDPSKVLLL ACHGSMASSE QKLIFDKPEP GVRKIVLATN LAETSITIND VVFVVDCGKA
0701: KETSYDALNN TPCLLPTWIS KASARQRRGR AGRVQSGECF HLYPQCVYNV FADYQLPELL RTPLQSLCLQ IKSLRLGSIS EFLSRALQSP ESLSVQNAIE
0801: YLKVIGAFDQ NEELTVLGKH LSMLPVEPKL GKMLIFGAIF NCLDPILTPS LLDLAVLPSS MQLAESAKLQ FSCRDYSDHL AIVRAYDGWR EAERDRNGYD
0901: YCWRNFLSAQ TLKALDSLRR QFLFLLKDTG LIDENMTMCN KWSRDENLVR AIICAGLYPG VSSVVNKEKS VSLKTMEDGQ VMLYSSSVNG KEAKIPFPWL
1001: VFNEKVKVNS VFLRDSTAIS DSILLLFGGN IQQGGLDGHL KMLGGYLEFF MSRDLASTYL NLKGELENLI HCKLQNPRID IQTSEELLSA VRLLVTEDPC
1101: SGRFVYGRQE PRSKKAKTMI SSASVVPMDR GGGGGQGGDN PKNQLQTLLT RAGHDNPSYK TKQIKNTLFR STVEFNGMQF VGQPCANKKL AEKDAAGEAI
1201: SWLTGGEAPP VTANARDRQD ADHMSVLTKP APRRRRHHHR RS
0001: MQLYSAIFRG HIRPNAVVGA ASMFIQHNSI QLHRSPKLLL RPSSVVRSLH CRRSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL PYFQRQNSGY
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKKRVGR LHKKKSREVL
1201: TDEILS
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKKRVGR LHKKKSREVL
1201: TDEILS
Arabidopsis Description
DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.