Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
19786127
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 99.04 | 98.8 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 97.51 | 97.67 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 97.67 | 97.43 |
| Os01t0118100-01 | Rice | cytosol, mitochondrion, nucleus | 60.61 | 92.18 |
| KXG32067 | Sorghum | mitochondrion | 87.62 | 87.83 |
| VIT_17s0000g03030.t01 | Wine grape | nucleus | 65.35 | 76.92 |
| Zm00001d040082_P003 | Maize | plastid | 83.52 | 73.85 |
| GSMUA_Achr3P20920_001 | Banana | mitochondrion, nucleus | 72.59 | 72.18 |
| KRH60477 | Soybean | plastid | 64.55 | 68.05 |
| KRH41772 | Soybean | plastid | 64.07 | 67.71 |
| CDY40601 | Canola | nucleus, plastid | 63.91 | 67.32 |
| Bra018747.1-P | Field mustard | plastid | 63.59 | 67.03 |
| CDX93688 | Canola | plastid | 63.59 | 67.03 |
| AT1G48650.2 | Thale cress | nucleus, plastid | 64.39 | 66.42 |
| Solyc03g118920.2.1 | Tomato | mitochondrion, nucleus | 63.99 | 66.28 |
| TraesCS5A01G387700.2 | Wheat | golgi, nucleus | 55.55 | 59.83 |
| TraesCS1A01G151100.1 | Wheat | nucleus | 37.06 | 44.8 |
| TraesCS4A01G124200.2 | Wheat | cytosol | 18.73 | 32.41 |
| TraesCS3A01G131800.1 | Wheat | nucleus | 17.93 | 31.81 |
| TraesCS4A01G239500.2 | Wheat | nucleus | 16.88 | 29.79 |
| TraesCS7A01G156700.1 | Wheat | plastid | 16.8 | 29.31 |
| TraesCS3A01G298900.1 | Wheat | nucleus | 25.72 | 27.23 |
| TraesCS2A01G304100.1 | Wheat | nucleus, plastid | 28.22 | 24.56 |
| TraesCS1A01G243400.1 | Wheat | nucleus | 19.21 | 22.55 |
| TraesCS4A01G158200.1 | Wheat | nucleus | 21.38 | 21.56 |
| TraesCS2A01G233700.1 | Wheat | nucleus | 19.21 | 18.92 |
| TraesCS6A01G178200.1 | Wheat | nucleus | 17.28 | 17.49 |
| TraesCS6A01G299400.2 | Wheat | nucleus | 17.93 | 16.82 |
| TraesCS5A01G074100.1 | Wheat | nucleus | 19.45 | 14.4 |
| TraesCS3A01G111000.1 | Wheat | nucleus | 19.21 | 13.63 |
| TraesCS2A01G164100.1 | Wheat | nucleus | 19.45 | 13.36 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR014720 | InterPro:P-loop_NTPase | PFAM:PF00035 | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF192 |
| SMART:SM00358 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| EnsemblPlantsGene:TraesCS3A01G021300 | EnsemblPlants:TraesCS3A01G021300.1 | TIGR:cd00046 | TIGR:cd00048 | InterPro:dsRBD_dom | SEG:seg |
Description
No Description!
Coordinates
chr3A:+:12232572..12241760
Molecular Weight (calculated)
139589.0 Da
IEP (calculated)
9.072
GRAVY (calculated)
-0.450
Length
1244 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLASSVLRG RLRPLRRPRP LIMPSPLFLS RNPSPSTSSS ASPQLPSPSA MSTSGVYVPP MRRLRSVIAS TNGNLAPPPA VQPAWTPEWR ADGRSLSPPS
0101: PPQPQRRTAA LPPRPPPPQT QPLRQQTAGY SRYAYDDFSE EESDREMDRT SVSSKGGAST LENVDEWKWK LHMLLRNDNE QEIMSREKKD RRDFDQLAQL
0201: ADRMGLHSRQ YSRIIVFSKV PLPNYRSDLD DKRPQREVSI PSGLQREVDA LLADYLARKR TDSGNFPNAA FSRSSSTDSF ATDESFYEQQ DNQTSTNVVM
0301: ERIQRRKSLQ LRNQQAAWQE SNDGQSMMEF RRSLPAQKER QSLLEAISQN QVVVVSGETG CGKTTQLPQY ILESEIEAAR GATCSIICTQ PRRISAISVS
0401: ERVAAERGEK IGESVGYKVR LEGMRGRDTR LLFCTTGVLL RRLLVDRSLK GVTHVIVDEI HERGMNEDFL LIVLKDLLPR RPELRLVLMS ATLNAEMFSS
0501: YFGGAPMIHI PGFTYPVRSR FLEDILEVTG HRLTPYNQID DYGQEKSWKM QKQGLRKRKS QIASVVEDAV KAADLRDYSP QTRDSLSCWN PDSIGFNLIE
0601: NVLCHICQKE RDGAVLVFMT GWDDINTLKD QLQSNPLLGD PSKVLLLACH GSMASSEQKL IFDKPEPGVR KIVLATNLAE TSITINDVVF VVDCGKAKET
0701: SYDALNNTPC LLPTWISKAS ARQRRGRAGR VQSGECFHLY PQCVYNVFAD YQLPELLRTP LQSLCLQIKS LRLGSISEFL SRALQSPESL SVQNAIEYLK
0801: VIGAFDQNEE LTVLGKHLSM LPVEPKLGKM LIFGAIFNCL DPILTIVAGL SVRDPFMTPF DKKDLAESAK LQFSCRDYSD HLAIVRAYDG WRDAERDRNG
0901: YDYCWRNFLS AQTLKALDSL RRQFLFLLKD TGLIDENMTM CNKWSRDENL VRAIICAGLY PGVSSVVNKE KSVSLKTMED GQVMLYSSSV NGKEAKIPFP
1001: WLVFNEKVKV NSVFLRDSTA ISDSILLLFG GNIQQGGLDG HLKMLGGYLE FFMSRDLAST YLNLKGELEN LIHCKLQNPR IDIQTSEELL SAVRLLVTED
1101: PCSGRFVYGR QEPRSKKAKT MISSASVASM DRGGGGGHGG DNPKNQLQTL LTRAGHDNPS YKTKQIKNTL FRSTVEFNGM QFVGQPCANK KLAEKDAAGE
1201: AISWLTGGEA PPVTANARDR QDADHMSMLT KPAPRRRRHH HRRS
0101: PPQPQRRTAA LPPRPPPPQT QPLRQQTAGY SRYAYDDFSE EESDREMDRT SVSSKGGAST LENVDEWKWK LHMLLRNDNE QEIMSREKKD RRDFDQLAQL
0201: ADRMGLHSRQ YSRIIVFSKV PLPNYRSDLD DKRPQREVSI PSGLQREVDA LLADYLARKR TDSGNFPNAA FSRSSSTDSF ATDESFYEQQ DNQTSTNVVM
0301: ERIQRRKSLQ LRNQQAAWQE SNDGQSMMEF RRSLPAQKER QSLLEAISQN QVVVVSGETG CGKTTQLPQY ILESEIEAAR GATCSIICTQ PRRISAISVS
0401: ERVAAERGEK IGESVGYKVR LEGMRGRDTR LLFCTTGVLL RRLLVDRSLK GVTHVIVDEI HERGMNEDFL LIVLKDLLPR RPELRLVLMS ATLNAEMFSS
0501: YFGGAPMIHI PGFTYPVRSR FLEDILEVTG HRLTPYNQID DYGQEKSWKM QKQGLRKRKS QIASVVEDAV KAADLRDYSP QTRDSLSCWN PDSIGFNLIE
0601: NVLCHICQKE RDGAVLVFMT GWDDINTLKD QLQSNPLLGD PSKVLLLACH GSMASSEQKL IFDKPEPGVR KIVLATNLAE TSITINDVVF VVDCGKAKET
0701: SYDALNNTPC LLPTWISKAS ARQRRGRAGR VQSGECFHLY PQCVYNVFAD YQLPELLRTP LQSLCLQIKS LRLGSISEFL SRALQSPESL SVQNAIEYLK
0801: VIGAFDQNEE LTVLGKHLSM LPVEPKLGKM LIFGAIFNCL DPILTIVAGL SVRDPFMTPF DKKDLAESAK LQFSCRDYSD HLAIVRAYDG WRDAERDRNG
0901: YDYCWRNFLS AQTLKALDSL RRQFLFLLKD TGLIDENMTM CNKWSRDENL VRAIICAGLY PGVSSVVNKE KSVSLKTMED GQVMLYSSSV NGKEAKIPFP
1001: WLVFNEKVKV NSVFLRDSTA ISDSILLLFG GNIQQGGLDG HLKMLGGYLE FFMSRDLAST YLNLKGELEN LIHCKLQNPR IDIQTSEELL SAVRLLVTED
1101: PCSGRFVYGR QEPRSKKAKT MISSASVASM DRGGGGGHGG DNPKNQLQTL LTRAGHDNPS YKTKQIKNTL FRSTVEFNGM QFVGQPCANK KLAEKDAAGE
1201: AISWLTGGEA PPVTANARDR QDADHMSMLT KPAPRRRRHH HRRS
0001: MQLYSAIFRG HIRPNAVVGA ASMFIQHNSI QLHRSPKLLL RPSSVVRSLH CRRSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL PYFQRQNSGY
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKKRVGR LHKKKSREVL
1201: TDEILS
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKKRVGR LHKKKSREVL
1201: TDEILS
Arabidopsis Description
DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.