Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41772 | Soybean | plastid | 95.17 | 95.41 |
| VIT_17s0000g03030.t01 | Wine grape | nucleus | 71.36 | 79.66 |
| Os01t0118100-01 | Rice | cytosol, mitochondrion, nucleus | 51.61 | 74.45 |
| CDY40601 | Canola | nucleus, plastid | 70.08 | 70.03 |
| Bra018747.1-P | Field mustard | plastid | 70.0 | 70.0 |
| CDX93688 | Canola | plastid | 69.92 | 69.92 |
| AT1G48650.2 | Thale cress | nucleus, plastid | 69.92 | 68.41 |
| Solyc03g118920.2.1 | Tomato | mitochondrion, nucleus | 68.64 | 67.44 |
| KRG90929 | Soybean | plastid | 64.24 | 66.55 |
| KXG32067 | Sorghum | mitochondrion | 68.47 | 65.11 |
| KRH38164 | Soybean | nucleus | 60.51 | 64.79 |
| TraesCS3A01G021300.1 | Wheat | extracellular | 68.05 | 64.55 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 68.14 | 64.47 |
| HORVU3Hr1G002800.8 | Barley | mitochondrion | 67.97 | 64.31 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 67.46 | 64.09 |
| GSMUA_Achr3P20920_001 | Banana | mitochondrion, nucleus | 67.12 | 63.31 |
| KRH44757 | Soybean | plastid | 59.07 | 60.03 |
| Zm00001d040082_P003 | Maize | plastid | 66.02 | 55.37 |
| KRH13104 | Soybean | mitochondrion | 19.75 | 54.44 |
| KRH72171 | Soybean | nucleus | 36.36 | 47.67 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 38.14 | 43.69 |
| KRH31768 | Soybean | cytosol, nucleus | 16.53 | 33.8 |
| KRH68290 | Soybean | nucleus | 20.42 | 33.47 |
| KRH69191 | Soybean | nucleus | 20.42 | 33.38 |
| KRG96553 | Soybean | nucleus | 20.34 | 33.29 |
| KRH21325 | Soybean | nucleus | 18.05 | 31.98 |
| KRH58751 | Soybean | nucleus | 18.47 | 31.28 |
| KRH70930 | Soybean | nucleus | 18.47 | 30.92 |
| KRH75071 | Soybean | nucleus | 18.39 | 30.78 |
| KRH12910 | Soybean | cytosol, nucleus | 17.71 | 28.05 |
| KRH14525 | Soybean | nucleus | 27.37 | 27.75 |
| KRH73592 | Soybean | nucleus | 27.2 | 27.62 |
| KRH69386 | Soybean | cytosol | 5.93 | 26.62 |
| KRG97372 | Soybean | nucleus | 21.44 | 26.16 |
| KRH01863 | Soybean | nucleus | 30.42 | 24.97 |
| KRH54662 | Soybean | nucleus | 21.19 | 23.9 |
| KRH74752 | Soybean | nucleus | 20.42 | 23.35 |
| KRH40933 | Soybean | cytosol | 11.78 | 22.82 |
| KRH05918 | Soybean | nucleus | 22.88 | 22.56 |
| KRH17401 | Soybean | nucleus | 22.88 | 22.44 |
| KRH23170 | Soybean | nucleus | 21.36 | 19.83 |
| KRH10165 | Soybean | nucleus | 21.27 | 19.73 |
| KRH76262 | Soybean | nucleus | 18.64 | 16.65 |
| KRH65271 | Soybean | nucleus | 18.39 | 16.41 |
| KRG97543 | Soybean | nucleus, plastid | 20.51 | 14.0 |
| KRH31333 | Soybean | nucleus, plastid | 20.34 | 13.82 |
Protein Annotations
| Gene3D:1.20.120.1080 | EntrezGene:100806141 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02003367 |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_05G242800 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | UniProt:I1K5G0 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014720 | EnsemblPlants:KRH60477 |
| ProteinID:KRH60477 | ProteinID:KRH60477.1 | InterPro:P-loop_NTPase | PFAM:PF00035 | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF04408 | PFAM:PF07717 | PFscan:PS50137 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 |
| PANTHER:PTHR18934:SF192 | SMART:SM00358 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 |
| SUPFAM:SSF54768 | UniParc:UPI000233A9C0 | InterPro:dsRBD_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:+:41764513..41775358
Molecular Weight (calculated)
133658.0 Da
IEP (calculated)
8.964
GRAVY (calculated)
-0.366
Length
1180 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPMTYSGIFQ GFIRFKATSR LRSAPLRHSL PSISSAPFHR TAIRLRHHSC SAALQVVKNT RQRTFKFPFW HQRSSTYGRF AYQDVSSDES DVEFASSPSH
0101: NQQLGDSTHE NIDDWRWKLT MLMRNKDEQE AVSREKKDRR DFEQLSTLAT RMGLYSRQYA RVVVFSKAPL PNYRPDLDDK RPQREVVLPL GVHKEVDAHL
0201: LAHLSQKARN KWDFMEDSLH NSSDSRSIPA NERMYEQPEP VTHNSVVKEK ILQRKSLQLH HQQQDWQESP EGQKMLEFRR SLPAFKEKDA FLRVISQSQV
0301: VVVSGETGCG KTTQLPQYIL ESEIEAARGA VCNIICTQPR RISAMSVSER VAAERGEKLG ESVGYKVRLE GMKGRDTRLL FCTTGVLLRR LLVDRNLKGV
0401: THVIVDEIHE RGMNEDFLLI VLKELLHHRP DLRLILMSAT LNAELFSSYF NGAPTMHIPG FTFPVRAHFL EDILERTGYR LTPYNQIDDY GQEKTWKMQK
0501: QAQAFRKRKS HIASAVEDAL EVAEFKGYSL RTQDSLSCWY PDSIGFNLIE HVLCHIVKNE RSGAVLVFMT GWDDITSLKD QLQAHPLLGD QSRVLLLACH
0601: GSMASSEQRL IFENPEGGVR KIVLATNMAE TSITINDVVF VVDIGKAKET SYDALNNTPC LLPSWISKAA ARQRRGRAGR VQPGECYHLY PRCVYDAFAD
0701: YQLPELLRTP LQSLCLQIKT LQLGSISEFL SRALQPPEPL SVQNAIEYLK IIGALDENEN LTVLGHKLAM LPVEPKLGKM LILGAIFKCL DPIMTIVAGL
0801: SVRDPFVMPS DKKDLAESAK AQFAARDYSD HLALIRAYDG WRDAEAQQAG YEYCWRNFLS SQTLRAIDSL RKQFFYLLKD ICLVNNNSET YNTWSHEEHL
0901: LRAVICAGLF PGISSVVNKD KSIALKTMED GQVLLYSSSV NGCVPRIPFP WLVFNEKVKV NSVFLRDSTG ISDSVLLLFG GNVSRGGLDG HLKMLGGYLE
1001: FFMKPELAKT YLSLKMGLEE LIQKKLLDPM LETQSHSELL SAVRLLVSED HCDGRFVFGR QVLPQSKKET NSKTGGVAEE KNYKNHLQAF LNRAGHDSPT
1101: YKTKELKNNQ FRSTVIFNGL NFVGQPCSSK KLAEKSAAAE ALLWLKGDSH SSDDIDHASV LLKKSNKKSR KNSFSSAKWS
0101: NQQLGDSTHE NIDDWRWKLT MLMRNKDEQE AVSREKKDRR DFEQLSTLAT RMGLYSRQYA RVVVFSKAPL PNYRPDLDDK RPQREVVLPL GVHKEVDAHL
0201: LAHLSQKARN KWDFMEDSLH NSSDSRSIPA NERMYEQPEP VTHNSVVKEK ILQRKSLQLH HQQQDWQESP EGQKMLEFRR SLPAFKEKDA FLRVISQSQV
0301: VVVSGETGCG KTTQLPQYIL ESEIEAARGA VCNIICTQPR RISAMSVSER VAAERGEKLG ESVGYKVRLE GMKGRDTRLL FCTTGVLLRR LLVDRNLKGV
0401: THVIVDEIHE RGMNEDFLLI VLKELLHHRP DLRLILMSAT LNAELFSSYF NGAPTMHIPG FTFPVRAHFL EDILERTGYR LTPYNQIDDY GQEKTWKMQK
0501: QAQAFRKRKS HIASAVEDAL EVAEFKGYSL RTQDSLSCWY PDSIGFNLIE HVLCHIVKNE RSGAVLVFMT GWDDITSLKD QLQAHPLLGD QSRVLLLACH
0601: GSMASSEQRL IFENPEGGVR KIVLATNMAE TSITINDVVF VVDIGKAKET SYDALNNTPC LLPSWISKAA ARQRRGRAGR VQPGECYHLY PRCVYDAFAD
0701: YQLPELLRTP LQSLCLQIKT LQLGSISEFL SRALQPPEPL SVQNAIEYLK IIGALDENEN LTVLGHKLAM LPVEPKLGKM LILGAIFKCL DPIMTIVAGL
0801: SVRDPFVMPS DKKDLAESAK AQFAARDYSD HLALIRAYDG WRDAEAQQAG YEYCWRNFLS SQTLRAIDSL RKQFFYLLKD ICLVNNNSET YNTWSHEEHL
0901: LRAVICAGLF PGISSVVNKD KSIALKTMED GQVLLYSSSV NGCVPRIPFP WLVFNEKVKV NSVFLRDSTG ISDSVLLLFG GNVSRGGLDG HLKMLGGYLE
1001: FFMKPELAKT YLSLKMGLEE LIQKKLLDPM LETQSHSELL SAVRLLVSED HCDGRFVFGR QVLPQSKKET NSKTGGVAEE KNYKNHLQAF LNRAGHDSPT
1101: YKTKELKNNQ FRSTVIFNGL NFVGQPCSSK KLAEKSAAAE ALLWLKGDSH SSDDIDHASV LLKKSNKKSR KNSFSSAKWS
0001: MQLYSAIFRG HIRPNAVVGA ASMFIQHNSI QLHRSPKLLL RPSSVVRSLH CRRSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL PYFQRQNSGY
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKSKNHA KASTKWG
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKSKNHA KASTKWG
Arabidopsis Description
DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.