Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH14525 | Soybean | nucleus | 95.01 | 94.85 |
| VIT_12s0028g01050.t01 | Wine grape | nucleus | 68.5 | 64.66 |
| Solyc07g044930.2.1 | Tomato | nucleus | 65.15 | 63.14 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 58.35 | 56.74 |
| CDY10756 | Canola | nucleus | 52.93 | 56.47 |
| TraesCS3A01G298900.1 | Wheat | nucleus | 56.97 | 56.34 |
| EES01523 | Sorghum | nucleus | 57.49 | 55.9 |
| Os01t0767700-01 | Rice | nucleus | 58.35 | 55.44 |
| GSMUA_Achr5P02110_001 | Banana | mitochondrion | 52.67 | 54.35 |
| TraesCS3D01G302800.2 | Wheat | plastid | 58.26 | 53.14 |
| AT2G30800.1 | Thale cress | nucleus | 59.21 | 52.96 |
| HORVU3Hr1G074660.7 | Barley | plastid | 57.23 | 52.2 |
| Bra021665.1-P | Field mustard | nucleus | 58.61 | 52.18 |
| CDX97797 | Canola | nucleus | 57.92 | 52.13 |
| CDY29644 | Canola | nucleus | 58.09 | 51.65 |
| Zm00001d012661_P002 | Maize | mitochondrion, plastid | 57.23 | 51.15 |
| Bra018293.1-P | Field mustard | plasma membrane, vacuole | 58.09 | 51.14 |
| CDY10215 | Canola | nucleus | 53.87 | 48.75 |
| AT1G06670.1 | Thale cress | nucleus | 53.36 | 39.34 |
| KRH72171 | Soybean | nucleus | 27.28 | 35.22 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 28.14 | 31.75 |
| KRH38164 | Soybean | nucleus | 28.4 | 29.95 |
| KRH58751 | Soybean | nucleus | 17.56 | 29.27 |
| KRH68290 | Soybean | nucleus | 17.99 | 29.03 |
| KRG96553 | Soybean | nucleus | 17.99 | 28.99 |
| KRG90929 | Soybean | plastid | 27.97 | 28.53 |
| KRH69191 | Soybean | nucleus | 17.64 | 28.39 |
| KRH31768 | Soybean | cytosol, nucleus | 13.94 | 28.08 |
| KRH41772 | Soybean | plastid | 28.06 | 27.7 |
| KRH70930 | Soybean | nucleus | 16.52 | 27.23 |
| KRH60477 | Soybean | plastid | 27.62 | 27.2 |
| KRH75071 | Soybean | nucleus | 16.35 | 26.95 |
| KRH21325 | Soybean | nucleus | 15.06 | 26.28 |
| KRH44757 | Soybean | plastid | 25.82 | 25.84 |
| KRH13104 | Soybean | mitochondrion | 9.12 | 24.77 |
| KRH12910 | Soybean | cytosol, nucleus | 15.32 | 23.89 |
| KRH01863 | Soybean | nucleus | 26.94 | 21.77 |
| KRG97372 | Soybean | nucleus | 17.73 | 21.3 |
| KRH69386 | Soybean | cytosol | 4.73 | 20.91 |
| KRH74752 | Soybean | nucleus | 18.07 | 20.35 |
| KRH54662 | Soybean | nucleus | 18.24 | 20.27 |
| KRH40933 | Soybean | cytosol | 10.5 | 20.03 |
| KRH05918 | Soybean | nucleus | 18.5 | 17.96 |
| KRH17401 | Soybean | nucleus | 18.42 | 17.79 |
| KRH10165 | Soybean | nucleus | 17.81 | 16.27 |
| KRH23170 | Soybean | nucleus | 17.73 | 16.21 |
| KRH65271 | Soybean | nucleus | 17.38 | 15.28 |
| KRH76262 | Soybean | nucleus | 17.21 | 15.14 |
| KRG97543 | Soybean | nucleus, plastid | 17.81 | 11.97 |
| KRH31333 | Soybean | nucleus, plastid | 17.73 | 11.87 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:1.25.40.20 | EntrezGene:100782189 | Gene3D:3.30.1370.50 | Gene3D:3.40.50.300 | MapMan:35.1 |
| EMBL:ACUP02001285 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 |
| EnsemblPlantsGene:GLYMA_02G282700 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001374 |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPR036867 | UniProt:K7KB99 |
| EnsemblPlants:KRH73592 | ProteinID:KRH73592 | ProteinID:KRH73592.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF01424 | PFAM:PF04408 | PFAM:PF07717 | PFscan:PS50297 | PFscan:PS51061 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF100 | InterPro:R3H_dom | InterPro:R3H_dom_sf | SMART:SM00393 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF82708 |
| UniParc:UPI0002336E02 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:+:46474078..46482693
Molecular Weight (calculated)
129445.0 Da
IEP (calculated)
6.760
GRAVY (calculated)
-0.246
Length
1162 amino acids
Sequence
(BLAST)
(BLAST)
0001: METTTKNKRE KKKGEPLFRQ NPNVDEVTRI RISQILEHFR ASNDEVYKFD ADLSNQERAL VHQMALKMGF RSKSYGLGKE RRVCVQKMKK KVDTDNGFGS
0101: LPQFTFSGEA KWVLGDLFAH YPPGDGNSWE MVGENSDTAT DRTKQRPDDI FSRPSMTKAE IARRLEALTS RMNNVSNLKQ IIEGRSKLPI VSYKDSITST
0201: VESHQVVLIS GETGCGKTTQ VPQFILDHMW GKGEVCKIVC TQPRRISATS VSERIASERG ETIGENVGYK IRLESRGGRQ SSIVLCTTGV LLRVLVSKGS
0301: HSSKIGRVKD EISGITHIIM DEIHERDRYS DFMLAIIRDM LPLYPHLCLI LMSATIDAAR FSQYFGGCPI IHVPGFTYPV KTFYLEDVLS IVKSRPDNHL
0401: DSTTCSIPKT TCELSEEEKL SIDEAINLAW SNDEWDLLLE LVSSEGTPDL FHYQHSLTGL TPLMVFAGKG RVGDMCMLLS CGADCHLRAK DGMTALEIAE
0501: RENQPEAAEI LKKHMDNDFS NSIEEKKLLD KYLATVNPEL VDDVLIEQLI RKICIDSTDG GILVFLPGWD DINRTRERLL ASPFFKNSSM FMLISLHSMV
0601: PSMEQKKVFR HPPHGCRKIV LSTNIAETAI TIDDIVYVID TGRMKEKSYD PYNNVSTLQS SWISKASAKQ REGRAGRCQP GICYHLYSRT RAASLPDFQI
0701: PEIRRMPIEE LCLQVKLLDP SCKVEEFLRK TLDPPVFESI SNAILVLQDI GAFSNDEKLT HLGEKLGSLP VHPLICRMLF FAILMNCLDP ALTLACASDY
0801: RDPFTLPMLP EEKKRASAAK SELASLYGGC SDQFAVLAAF ECWNNAKKMG LEARFCSQYF VSSSAMNMLS GMRRQLQAEL IRIGFIHEDV SGYSVNTHDP
0901: GVLHAVLVAG LYPRVGRFLT NKGGKRVIVE TTSGDKVRLH NHSTNFKLSF KKNLDNTLIV YDEITRGDGG MNIRNCTVVG PLPLLLLSTE IAVAPAEEND
1001: EGDVDDAVGS EDEAGSEDGM EFDAESSGGR EDKLMSSPDN MVKVIMDRWL YFRSTAIDVA QLYCLRERLS AAILYKVTHP RNTLPPIMAA SVHAIACILS
1101: CDGCIGVSAM LEGVDTLTTM VNATSLGKPA TGTRRFGKRP KGSLAELLNY DGRQNSGPHF KA
0101: LPQFTFSGEA KWVLGDLFAH YPPGDGNSWE MVGENSDTAT DRTKQRPDDI FSRPSMTKAE IARRLEALTS RMNNVSNLKQ IIEGRSKLPI VSYKDSITST
0201: VESHQVVLIS GETGCGKTTQ VPQFILDHMW GKGEVCKIVC TQPRRISATS VSERIASERG ETIGENVGYK IRLESRGGRQ SSIVLCTTGV LLRVLVSKGS
0301: HSSKIGRVKD EISGITHIIM DEIHERDRYS DFMLAIIRDM LPLYPHLCLI LMSATIDAAR FSQYFGGCPI IHVPGFTYPV KTFYLEDVLS IVKSRPDNHL
0401: DSTTCSIPKT TCELSEEEKL SIDEAINLAW SNDEWDLLLE LVSSEGTPDL FHYQHSLTGL TPLMVFAGKG RVGDMCMLLS CGADCHLRAK DGMTALEIAE
0501: RENQPEAAEI LKKHMDNDFS NSIEEKKLLD KYLATVNPEL VDDVLIEQLI RKICIDSTDG GILVFLPGWD DINRTRERLL ASPFFKNSSM FMLISLHSMV
0601: PSMEQKKVFR HPPHGCRKIV LSTNIAETAI TIDDIVYVID TGRMKEKSYD PYNNVSTLQS SWISKASAKQ REGRAGRCQP GICYHLYSRT RAASLPDFQI
0701: PEIRRMPIEE LCLQVKLLDP SCKVEEFLRK TLDPPVFESI SNAILVLQDI GAFSNDEKLT HLGEKLGSLP VHPLICRMLF FAILMNCLDP ALTLACASDY
0801: RDPFTLPMLP EEKKRASAAK SELASLYGGC SDQFAVLAAF ECWNNAKKMG LEARFCSQYF VSSSAMNMLS GMRRQLQAEL IRIGFIHEDV SGYSVNTHDP
0901: GVLHAVLVAG LYPRVGRFLT NKGGKRVIVE TTSGDKVRLH NHSTNFKLSF KKNLDNTLIV YDEITRGDGG MNIRNCTVVG PLPLLLLSTE IAVAPAEEND
1001: EGDVDDAVGS EDEAGSEDGM EFDAESSGGR EDKLMSSPDN MVKVIMDRWL YFRSTAIDVA QLYCLRERLS AAILYKVTHP RNTLPPIMAA SVHAIACILS
1101: CDGCIGVSAM LEGVDTLTTM VNATSLGKPA TGTRRFGKRP KGSLAELLNY DGRQNSGPHF KA
0001: MGNKRFRSDN NAGKPTSVEA TRIWATKVIE DFRASGNEVY TFEHNLSNNE RGVIHQMCRK MGIQSKSSGR GEQRRLSIFK SRHKNGNKNE ANEKSNKEKL
0101: KCVSFPPGAD VILQELFTHY PPCDGDTAAT SFTKYSGNKG KQGQWKDDFF RKPQISSEEI LEKVASLSSR LKKDKALKEI TKLRSKLPIT SFKDAITSAV
0201: ESNQVILISG ETGCGKTTQV PQYLLDHMWS SKRETCKIVC TQPRRISAMS VSERISCERG ESIGENIGYK VRLQSKGGRH SSVVFCTNGI LLRVLVGKGS
0301: VSSVSDITHI IVDEIHERDC YSDFMLAIIR DLLPSNPHLR LILMSATLDA ERFSGYFGGC PVVRVPGFTY PVRTLYLEDV LSILKSGGDN HLSSTNLSIS
0401: DHKLDLTDED KLALDEAIIL AWTNDEFDAL LDLVSSRGSH EIYNYQHQST WLTPLMVFAG KGRISDVCML LSFGADWSLK SKDGMTALEL AEAENQLEAA
0501: QIIREHADNS QSNSQQGQQL LDKYMATINP EQVDVSLIQQ LMRKICGDSE DGAILVFLPG WDDINKTRQR LLENPFFADS AKFDIICLHS MVPAGEQKKV
0601: FNRPPPGCRK IVLATNIAES AVTIDDVVYV IDSGRMKEKS YDPYNNVSTL QSSWVSKANA KQRQGRAGRC QPGICYHLYS RLRAASMPDF KVPEIKRMPV
0701: EELCLQVKIL DPNCKTNDFL QKLLDPPVDQ SIANALSILQ DIGALTPQEE LTELGEKFGH LPVHPLISKM LFFAVLVNCL DPALTLACAA DYKEPFTMPM
0801: SPVERQKAAA AKLELASLCG GDSDHLAVVA AFECWKNAKG RGLSAEFCSQ YFVSPSAMKM LDQMRSQLES ELKRHGIIPN DISSCSQNSR DPGILRAVLA
0901: VGLYPMVGRL CPAFGNNRRT IVETASGAKV RVHSLSNNFN LSSKKYDESL LVFDEITRGD GGMHIRNCTV ARDLPLLLIS TEIAVAPTGS SDSDDSNEEE
1001: EDDEEVAANT NEEVAANTNE EGMDIHKEES RRGAKMMSSP ENSVKLVVDR WLPFRTTALE VAQMYILRER LMASILFKVT HPREHLPPHL GASMHAIAGI
1101: LSYDGHAGLS CPPESMVPKH SRTEMYDTGG WEEKPNSFLN SLFWSLSLKE NKHPSHTNRN QQHNYNMAPT EAASIPRQQN YKQRNPKATN NTDSGKKKEK
1201: MFVNPTNRIN QPEAASTGKP SKHKSANSSG SSNKKENMPS DQAYGNKQHN TVPREAAAPM AKNQSSKKTK TRSGNNSDSG KKKEQYIPKR QREDKAEQK
0101: KCVSFPPGAD VILQELFTHY PPCDGDTAAT SFTKYSGNKG KQGQWKDDFF RKPQISSEEI LEKVASLSSR LKKDKALKEI TKLRSKLPIT SFKDAITSAV
0201: ESNQVILISG ETGCGKTTQV PQYLLDHMWS SKRETCKIVC TQPRRISAMS VSERISCERG ESIGENIGYK VRLQSKGGRH SSVVFCTNGI LLRVLVGKGS
0301: VSSVSDITHI IVDEIHERDC YSDFMLAIIR DLLPSNPHLR LILMSATLDA ERFSGYFGGC PVVRVPGFTY PVRTLYLEDV LSILKSGGDN HLSSTNLSIS
0401: DHKLDLTDED KLALDEAIIL AWTNDEFDAL LDLVSSRGSH EIYNYQHQST WLTPLMVFAG KGRISDVCML LSFGADWSLK SKDGMTALEL AEAENQLEAA
0501: QIIREHADNS QSNSQQGQQL LDKYMATINP EQVDVSLIQQ LMRKICGDSE DGAILVFLPG WDDINKTRQR LLENPFFADS AKFDIICLHS MVPAGEQKKV
0601: FNRPPPGCRK IVLATNIAES AVTIDDVVYV IDSGRMKEKS YDPYNNVSTL QSSWVSKANA KQRQGRAGRC QPGICYHLYS RLRAASMPDF KVPEIKRMPV
0701: EELCLQVKIL DPNCKTNDFL QKLLDPPVDQ SIANALSILQ DIGALTPQEE LTELGEKFGH LPVHPLISKM LFFAVLVNCL DPALTLACAA DYKEPFTMPM
0801: SPVERQKAAA AKLELASLCG GDSDHLAVVA AFECWKNAKG RGLSAEFCSQ YFVSPSAMKM LDQMRSQLES ELKRHGIIPN DISSCSQNSR DPGILRAVLA
0901: VGLYPMVGRL CPAFGNNRRT IVETASGAKV RVHSLSNNFN LSSKKYDESL LVFDEITRGD GGMHIRNCTV ARDLPLLLIS TEIAVAPTGS SDSDDSNEEE
1001: EDDEEVAANT NEEVAANTNE EGMDIHKEES RRGAKMMSSP ENSVKLVVDR WLPFRTTALE VAQMYILRER LMASILFKVT HPREHLPPHL GASMHAIAGI
1101: LSYDGHAGLS CPPESMVPKH SRTEMYDTGG WEEKPNSFLN SLFWSLSLKE NKHPSHTNRN QQHNYNMAPT EAASIPRQQN YKQRNPKATN NTDSGKKKEK
1201: MFVNPTNRIN QPEAASTGKP SKHKSANSSG SSNKKENMPS DQAYGNKQHN TVPREAAAPM AKNQSSKKTK TRSGNNSDSG KKKEQYIPKR QREDKAEQK
Arabidopsis Description
HVT1DExH-box ATP-dependent RNA helicase DExH6 [Source:UniProtKB/Swiss-Prot;Acc:F4INY4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.