Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH73592 | Soybean | nucleus | 94.85 | 95.01 |
| VIT_12s0028g01050.t01 | Wine grape | nucleus | 67.78 | 64.09 |
| Solyc07g044930.2.1 | Tomato | nucleus | 64.26 | 62.39 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 57.99 | 56.49 |
| TraesCS3A01G298900.1 | Wheat | nucleus | 56.62 | 56.09 |
| CDY10756 | Canola | nucleus | 52.23 | 55.83 |
| EES01523 | Sorghum | nucleus | 57.13 | 55.65 |
| Os01t0767700-01 | Rice | nucleus | 57.82 | 55.03 |
| GSMUA_Achr5P02110_001 | Banana | mitochondrion | 52.75 | 54.53 |
| TraesCS3D01G302800.2 | Wheat | plastid | 57.9 | 52.9 |
| AT2G30800.1 | Thale cress | nucleus | 58.33 | 52.27 |
| HORVU3Hr1G074660.7 | Barley | plastid | 56.96 | 52.04 |
| Bra021665.1-P | Field mustard | nucleus | 57.99 | 51.72 |
| CDX97797 | Canola | nucleus | 57.13 | 51.51 |
| CDY29644 | Canola | nucleus | 57.47 | 51.19 |
| Zm00001d012661_P002 | Maize | mitochondrion, plastid | 56.79 | 50.85 |
| Bra018293.1-P | Field mustard | plasma membrane, vacuole | 57.39 | 50.61 |
| CDY10215 | Canola | nucleus | 53.44 | 48.44 |
| AT1G06670.1 | Thale cress | nucleus | 52.92 | 39.09 |
| KRH72171 | Soybean | nucleus | 27.49 | 35.56 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 28.26 | 31.94 |
| KRH38164 | Soybean | nucleus | 28.35 | 29.95 |
| KRH58751 | Soybean | nucleus | 17.18 | 28.69 |
| KRH68290 | Soybean | nucleus | 17.7 | 28.61 |
| KRG96553 | Soybean | nucleus | 17.7 | 28.57 |
| KRG90929 | Soybean | plastid | 27.92 | 28.53 |
| KRH31768 | Soybean | cytosol, nucleus | 13.92 | 28.08 |
| KRH69191 | Soybean | nucleus | 17.35 | 27.98 |
| KRH41772 | Soybean | plastid | 28.09 | 27.78 |
| KRH60477 | Soybean | plastid | 27.75 | 27.37 |
| KRH70930 | Soybean | nucleus | 16.32 | 26.95 |
| KRH75071 | Soybean | nucleus | 16.24 | 26.81 |
| KRH44757 | Soybean | plastid | 25.86 | 25.93 |
| KRH21325 | Soybean | nucleus | 14.78 | 25.83 |
| KRH13104 | Soybean | mitochondrion | 9.28 | 25.23 |
| KRH12910 | Soybean | cytosol, nucleus | 15.29 | 23.89 |
| KRH01863 | Soybean | nucleus | 27.41 | 22.18 |
| KRG97372 | Soybean | nucleus | 17.87 | 21.51 |
| KRH69386 | Soybean | cytosol | 4.81 | 21.29 |
| KRH54662 | Soybean | nucleus | 18.04 | 20.08 |
| KRH74752 | Soybean | nucleus | 17.78 | 20.06 |
| KRH40933 | Soybean | cytosol | 10.4 | 19.87 |
| KRH05918 | Soybean | nucleus | 18.64 | 18.13 |
| KRH17401 | Soybean | nucleus | 18.56 | 17.96 |
| KRH23170 | Soybean | nucleus | 17.61 | 16.13 |
| KRH10165 | Soybean | nucleus | 17.61 | 16.12 |
| KRH65271 | Soybean | nucleus | 17.44 | 15.36 |
| KRH76262 | Soybean | nucleus | 17.35 | 15.29 |
| KRG97543 | Soybean | nucleus, plastid | 17.35 | 11.68 |
| KRH31333 | Soybean | nucleus, plastid | 17.35 | 11.64 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:1.25.40.20 | EntrezGene:100810272 | Gene3D:3.30.1370.50 | Gene3D:3.40.50.300 | MapMan:35.1 |
| EMBL:ACUP02008504 | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_14G031600 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001374 | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:IPR036867 | UniProt:K7M4P5 | EnsemblPlants:KRH14525 |
| ProteinID:KRH14525 | ProteinID:KRH14525.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF01424 |
| PFAM:PF04408 | PFAM:PF07717 | PFscan:PS50297 | PFscan:PS51061 | PFscan:PS51192 | PFscan:PS51194 |
| PANTHER:PTHR18934 | PANTHER:PTHR18934:SF100 | InterPro:R3H_dom | InterPro:R3H_dom_sf | SMART:SM00393 | SMART:SM00487 |
| SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF48403 | SUPFAM:SSF52540 | SUPFAM:SSF82708 | UniParc:UPI000233C100 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr14:-:2300463..2308888
Molecular Weight (calculated)
129424.0 Da
IEP (calculated)
6.545
GRAVY (calculated)
-0.224
Length
1164 amino acids
Sequence
(BLAST)
(BLAST)
0001: METTTKTNKT GKKKGEPLFR QNPNVDEVTR ICISQILEQF RASNDEVYKF DAGLSNQERA LVHQMALKMG FRSKSYGLGK ERRVCVQKMK KKVDTDNGFG
0101: SLPPFTFSGE AKWVLGDLFA HHPPGEGNLW EMVGENSEDT TTDGTKQRPG DIFSRPSMTK AEIARRLEAL ASRMNNVSNL KQINEGRSKL PIASFKDSIT
0201: STVESHQVVL ISGETGCGKT TQVPQFILDH MWGKGEVCKI VCTQPRRISA TSVSERIASE RGETIGENVG YKIRLESRGG RQSSIVLCTT GVVLRVLVSK
0301: GSHSSKTGRV KDEISGITHI IMDEIHERDR YSDFMLAIIR DMLPLYPHLR LILMSATIDA ARFSQYFGGC PIIHVPGFTY PVKTFYLEDV LSIVKSRHDN
0401: HLDSTTCSIP KNTCELSEEE KLSIDEAINL AWSNDEWDLL LELVSSEGTP ELFNYQHSLT GLTPLMVFAG KGRVGDMCML LSCGADFCLR AKDGMAALEI
0501: AERENQPEAA EILKKHMDSD FSNSMEEKKL LDKYLATVNP ELVDDVLIEQ LIRKICIDST DGGILVFLPG WDDINRTRER LLASSFFKNS SMFMLISLHS
0601: MVPSMEQKKV FRRPPHGCRK IVLSTNIAET AITIDDIVYV IDTGRMKEKS YDAYNNVSTL QSSWISKASA KQREGRAGRC QPGICYHLYS RTRAVSLPDF
0701: QIPEIRRMPI EELCLQVKLL DPSCKVEEFL CKTLDPPVFE SIRNAIIVLQ DIGALSNDEK LTQLGEKLGS LPVHPLICRM LFFAILMNCL DPALTLACAS
0801: DYRDPFTLPM LPEEKKRASA AKYELASLYG GCSDQFAILA AFECWNNAKK MGLEARFCSQ YFVSSSTMNM LSGMRRQLQA ELIRLGFIHE DVSGYSVNTH
0901: DPGVLNAVLV AGLYPRVGRF LTNKSGKRVI VETTSGDKVR LHNHSINFKL SFKKKLDDTL IVYDEITRGD GGMNLRNCTV VGPLPLLLLS TEIAVAPAEE
1001: NDEGDEDDVG GSEDEAGSED VMEFDAESSG GREDKLMSSP DNMVKVIMDR WLYFCSTAID VAQLYCLRER LSAAILYKVT NPRNTLPPIM AASVHAIACI
1101: LSCDGCIGVP AMLEGVETLT TMVNATTLGK PATGTRRFGK RPKGSLAELL NYDGRQTSGP YFKA
0101: SLPPFTFSGE AKWVLGDLFA HHPPGEGNLW EMVGENSEDT TTDGTKQRPG DIFSRPSMTK AEIARRLEAL ASRMNNVSNL KQINEGRSKL PIASFKDSIT
0201: STVESHQVVL ISGETGCGKT TQVPQFILDH MWGKGEVCKI VCTQPRRISA TSVSERIASE RGETIGENVG YKIRLESRGG RQSSIVLCTT GVVLRVLVSK
0301: GSHSSKTGRV KDEISGITHI IMDEIHERDR YSDFMLAIIR DMLPLYPHLR LILMSATIDA ARFSQYFGGC PIIHVPGFTY PVKTFYLEDV LSIVKSRHDN
0401: HLDSTTCSIP KNTCELSEEE KLSIDEAINL AWSNDEWDLL LELVSSEGTP ELFNYQHSLT GLTPLMVFAG KGRVGDMCML LSCGADFCLR AKDGMAALEI
0501: AERENQPEAA EILKKHMDSD FSNSMEEKKL LDKYLATVNP ELVDDVLIEQ LIRKICIDST DGGILVFLPG WDDINRTRER LLASSFFKNS SMFMLISLHS
0601: MVPSMEQKKV FRRPPHGCRK IVLSTNIAET AITIDDIVYV IDTGRMKEKS YDAYNNVSTL QSSWISKASA KQREGRAGRC QPGICYHLYS RTRAVSLPDF
0701: QIPEIRRMPI EELCLQVKLL DPSCKVEEFL CKTLDPPVFE SIRNAIIVLQ DIGALSNDEK LTQLGEKLGS LPVHPLICRM LFFAILMNCL DPALTLACAS
0801: DYRDPFTLPM LPEEKKRASA AKYELASLYG GCSDQFAILA AFECWNNAKK MGLEARFCSQ YFVSSSTMNM LSGMRRQLQA ELIRLGFIHE DVSGYSVNTH
0901: DPGVLNAVLV AGLYPRVGRF LTNKSGKRVI VETTSGDKVR LHNHSINFKL SFKKKLDDTL IVYDEITRGD GGMNLRNCTV VGPLPLLLLS TEIAVAPAEE
1001: NDEGDEDDVG GSEDEAGSED VMEFDAESSG GREDKLMSSP DNMVKVIMDR WLYFCSTAID VAQLYCLRER LSAAILYKVT NPRNTLPPIM AASVHAIACI
1101: LSCDGCIGVP AMLEGVETLT TMVNATTLGK PATGTRRFGK RPKGSLAELL NYDGRQTSGP YFKA
0001: MGNKRFRSDN NAGKPTSVEA TRIWATKVIE DFRASGNEVY TFEHNLSNNE RGVIHQMCRK MGIQSKSSGR GEQRRLSIFK SRHKNGNKNE ANEKSNKEKL
0101: KCVSFPPGAD VILQELFTHY PPCDGDTAAT SFTKYSGNKG KQGQWKDDFF RKPQISSEEI LEKVASLSSR LKKDKALKEI TKLRSKLPIT SFKDAITSAV
0201: ESNQVILISG ETGCGKTTQV PQYLLDHMWS SKRETCKIVC TQPRRISAMS VSERISCERG ESIGENIGYK VRLQSKGGRH SSVVFCTNGI LLRVLVGKGS
0301: VSSVSDITHI IVDEIHERDC YSDFMLAIIR DLLPSNPHLR LILMSATLDA ERFSGYFGGC PVVRVPGFTY PVRTLYLEDV LSILKSGGDN HLSSTNLSIS
0401: DHKLDLTDED KLALDEAIIL AWTNDEFDAL LDLVSSRGSH EIYNYQHQST WLTPLMVFAG KGRISDVCML LSFGADWSLK SKDGMTALEL AEAENQLEAA
0501: QIIREHADNS QSNSQQGQQL LDKYMATINP EQVDVSLIQQ LMRKICGDSE DGAILVFLPG WDDINKTRQR LLENPFFADS AKFDIICLHS MVPAGEQKKV
0601: FNRPPPGCRK IVLATNIAES AVTIDDVVYV IDSGRMKEKS YDPYNNVSTL QSSWVSKANA KQRQGRAGRC QPGICYHLYS RLRAASMPDF KVPEIKRMPV
0701: EELCLQVKIL DPNCKTNDFL QKLLDPPVDQ SIANALSILQ DIGALTPQEE LTELGEKFGH LPVHPLISKM LFFAVLVNCL DPALTLACAA DYKEPFTMPM
0801: SPVERQKAAA AKLELASLCG GDSDHLAVVA AFECWKNAKG RGLSAEFCSQ YFVSPSAMKM LDQMRSQLES ELKRHGIIPN DISSCSQNSR DPGILRAVLA
0901: VGLYPMVGRL CPAFGNNRRT IVETASGAKV RVHSLSNNFN LSSKKYDESL LVFDEITRGD GGMHIRNCTV ARDLPLLLIS TEIAVAPTGS SDSDDSNEEE
1001: EDDEEVAANT NEEVAANTNE EGMDIHKEES RRGAKMMSSP ENSVKLVVDR WLPFRTTALE VAQMYILRER LMASILFKVT HPREHLPPHL GASMHAIAGI
1101: LSYDGHAGLS CPPESMVPKH SRTEMYDTGG WEEKPNSFLN SLFWSLSLKE NKHPSHTNRN QQHNYNMAPT EAASIPRQQN YKQRNPKATN NTDSGKKKEK
1201: MFVNPTNRIN QPEAASTGKP SKHKSANSSG SSNKKENMPS DQAYGNKQHN TVPREAAAPM AKNQSSKKTK TRSGNNSDSG KKKEQYIPKR QREDKAEQK
0101: KCVSFPPGAD VILQELFTHY PPCDGDTAAT SFTKYSGNKG KQGQWKDDFF RKPQISSEEI LEKVASLSSR LKKDKALKEI TKLRSKLPIT SFKDAITSAV
0201: ESNQVILISG ETGCGKTTQV PQYLLDHMWS SKRETCKIVC TQPRRISAMS VSERISCERG ESIGENIGYK VRLQSKGGRH SSVVFCTNGI LLRVLVGKGS
0301: VSSVSDITHI IVDEIHERDC YSDFMLAIIR DLLPSNPHLR LILMSATLDA ERFSGYFGGC PVVRVPGFTY PVRTLYLEDV LSILKSGGDN HLSSTNLSIS
0401: DHKLDLTDED KLALDEAIIL AWTNDEFDAL LDLVSSRGSH EIYNYQHQST WLTPLMVFAG KGRISDVCML LSFGADWSLK SKDGMTALEL AEAENQLEAA
0501: QIIREHADNS QSNSQQGQQL LDKYMATINP EQVDVSLIQQ LMRKICGDSE DGAILVFLPG WDDINKTRQR LLENPFFADS AKFDIICLHS MVPAGEQKKV
0601: FNRPPPGCRK IVLATNIAES AVTIDDVVYV IDSGRMKEKS YDPYNNVSTL QSSWVSKANA KQRQGRAGRC QPGICYHLYS RLRAASMPDF KVPEIKRMPV
0701: EELCLQVKIL DPNCKTNDFL QKLLDPPVDQ SIANALSILQ DIGALTPQEE LTELGEKFGH LPVHPLISKM LFFAVLVNCL DPALTLACAA DYKEPFTMPM
0801: SPVERQKAAA AKLELASLCG GDSDHLAVVA AFECWKNAKG RGLSAEFCSQ YFVSPSAMKM LDQMRSQLES ELKRHGIIPN DISSCSQNSR DPGILRAVLA
0901: VGLYPMVGRL CPAFGNNRRT IVETASGAKV RVHSLSNNFN LSSKKYDESL LVFDEITRGD GGMHIRNCTV ARDLPLLLIS TEIAVAPTGS SDSDDSNEEE
1001: EDDEEVAANT NEEVAANTNE EGMDIHKEES RRGAKMMSSP ENSVKLVVDR WLPFRTTALE VAQMYILRER LMASILFKVT HPREHLPPHL GASMHAIAGI
1101: LSYDGHAGLS CPPESMVPKH SRTEMYDTGG WEEKPNSFLN SLFWSLSLKE NKHPSHTNRN QQHNYNMAPT EAASIPRQQN YKQRNPKATN NTDSGKKKEK
1201: MFVNPTNRIN QPEAASTGKP SKHKSANSSG SSNKKENMPS DQAYGNKQHN TVPREAAAPM AKNQSSKKTK TRSGNNSDSG KKKEQYIPKR QREDKAEQK
Arabidopsis Description
HVT1DExH-box ATP-dependent RNA helicase DExH6 [Source:UniProtKB/Swiss-Prot;Acc:F4INY4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.