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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plastid 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH31333 Soybean nucleus, plastid 93.35 92.97
PGSC0003DMT400041805 Potato nucleus 55.52 59.19
GSMUA_Achr8P17640_001 Banana nucleus 41.93 58.85
PGSC0003DMT400060759 Potato nucleus 57.49 57.49
Solyc04g014210.2.1 Tomato nucleus 57.49 57.46
Solyc11g010310.1.1 Tomato nucleus 56.16 56.95
VIT_07s0191g00210.t01 Wine grape nucleus 57.14 56.88
AT5G10370.1 Thale cress nucleus 57.32 55.83
Bra006057.1-P Field mustard plastid 56.39 55.56
AT4G01020.1 Thale cress nucleus 57.2 55.34
CDX78376 Canola plastid 56.16 55.26
CDX81170 Canola plastid 55.87 54.79
OQU90279 Sorghum nucleus 47.6 54.25
TraesCS5B01G080500.1 Wheat nucleus 41.3 53.97
Os07t0621500-01 Rice cytosol, nucleus 40.08 53.85
Bra009038.1-P Field mustard plastid 54.95 53.76
CDX69841 Canola plastid 54.89 53.71
CDX96996 Canola nucleus 54.77 53.53
TraesCS5A01G074100.1 Wheat nucleus 49.1 50.54
TraesCS5D01G087800.2 Wheat nucleus 48.87 50.45
TraesCS2D01G171200.2 Wheat nucleus 50.78 50.29
TraesCS2B01G190100.1 Wheat nucleus 50.32 50.17
Zm00001d022176_P002 Maize nucleus 50.26 49.6
HORVU5Hr1G019730.1 Barley nucleus, plastid 48.64 49.24
TraesCS3B01G129700.1 Wheat nucleus 46.1 49.02
TraesCS3D01G112900.1 Wheat nucleus 37.71 48.77
TraesCS3A01G111000.1 Wheat nucleus 49.45 48.75
TraesCS2A01G164100.1 Wheat nucleus 50.67 48.37
HORVU2Hr1G030040.17 Barley nucleus 50.26 47.62
KRH21325 Soybean nucleus 12.78 33.18
KRH75071 Soybean nucleus 13.42 32.91
KRH70930 Soybean nucleus 13.36 32.77
KRH58751 Soybean nucleus 13.19 32.71
KRH31768 Soybean cytosol, nucleus 10.41 31.2
KRH69191 Soybean nucleus 12.84 30.75
KRH68290 Soybean nucleus 12.78 30.69
KRG96553 Soybean nucleus 12.72 30.51
KRH12910 Soybean cytosol, nucleus 11.86 27.52
KRH69386 Soybean cytosol 4.16 27.38
KRG97372 Soybean nucleus 15.04 26.89
KRH40933 Soybean cytosol 8.39 23.81
KRH74752 Soybean nucleus 14.0 23.45
KRH54662 Soybean nucleus 14.11 23.33
KRH72171 Soybean nucleus 11.8 22.67
KRH05918 Soybean nucleus 15.56 22.47
KRH17401 Soybean nucleus 15.62 22.44
KRH38164 Soybean nucleus 14.29 22.41
KRH44757 Soybean plastid 14.11 21.02
KRG90929 Soybean plastid 13.71 20.81
KRH32860 Soybean mitochondrion, nucleus, plastid 12.26 20.58
KRH41772 Soybean plastid 14.0 20.56
KRH60477 Soybean plastid 14.0 20.51
KRH10165 Soybean nucleus 14.57 19.81
KRH23170 Soybean nucleus 14.52 19.75
KRH13104 Soybean mitochondrion 4.86 19.63
KRH73592 Soybean nucleus 11.97 17.81
KRH65271 Soybean nucleus 13.42 17.55
KRH76262 Soybean nucleus 13.36 17.49
KRH14525 Soybean nucleus 11.68 17.35
KRH01863 Soybean nucleus 13.24 15.92
Protein Annotations
Gene3D:1.10.10.2130Gene3D:1.20.120.1750EntrezGene:100810008MapMan:19.2.2.1.5.4.3Gene3D:3.30.40.10Gene3D:3.40.50.300
EMBL:ACUP02010800ncoils:CoilInterPro:DEAD/DEAH_box_helicase_domInterPro:DNA/RNA_helicase_DEAH_CSInterPro:DUF1605EnsemblPlantsGene:GLYMA_18G014800
GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003824GO:GO:0004004
GO:GO:0004386GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005634GO:GO:0005730GO:GO:0005737GO:GO:0006139GO:GO:0006396GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0046872InterPro:Helicase-assoc_domInterPro:Helicase_ATP-bd
InterPro:Helicase_CUniProt:I1MYP1InterPro:IBR_domInterPro:IPR001650InterPro:IPR001841InterPro:IPR013083
InterPro:IPR013087InterPro:IPR014001EnsemblPlants:KRG97543ProteinID:KRG97543ProteinID:KRG97543.1InterPro:P-loop_NTPase
PFAM:PF00270PFAM:PF00271PFAM:PF01485PFAM:PF04408PFAM:PF07717ScanProsite:PS00028
ScanProsite:PS00518ScanProsite:PS00690PFscan:PS50089PFscan:PS51192PFscan:PS51194PANTHER:PTHR18934
PANTHER:PTHR18934:SF81SMART:SM00184SMART:SM00487SMART:SM00490SMART:SM00647SMART:SM00847
SUPFAM:SSF52540SUPFAM:SSF57850UniParc:UPI000233E146InterPro:Znf_C2H2_typeInterPro:Znf_RINGInterPro:Znf_RING/FYVE/PHD
InterPro:Znf_RING_CSSEG:seg::::
Description
hypothetical protein
Coordinates
chr18:-:1022745..1029468
Molecular Weight (calculated)
196101.0 Da
IEP (calculated)
7.068
GRAVY (calculated)
-0.235
Length
1729 amino acids
Sequence
(BLAST)
0001: MKKSSYPNPT PRRHDFHRPP PPTHGCGWAP RPAYHRPYHQ WRPRFHPHAA RIDRPPEPYF RVELRLGSSP LHRDDVEALI DECHSRHDTF TFYPVDDVAA
0101: VLSYRSWEQA RDAVVWFWEA RLAEKHDFTP TLDSNVVVVK DDVDCRLRPV FARHVKGLTE GKEVKRWMEE SERLSKEISR LSSSLSKPLR LGVHNELVEK
0201: KKGLVDEKNL VERRLKEFES AMQCLLKYLE GGVDVEGVTV FRFDGGFDWK RIHCLIKREC RRLEDGLPIY AYRSDILQEI HYQQIMVLIG ETGSGKSTQL
0301: VQFLADSGIG TDESIVCTQP RKIAAKSVAQ RVQEESIGCY EGQSIKCCST FSSSREFDSR IAFMTDHCLL QHYMSDNNLS GVSCIIIDEA HERSLNTDLL
0401: LTLLKSLLCR RVEMRLIIMS ATADAKQLSD YFFACGIFRV LGRSFPVDIK YVPSDYAGDS GSAVVASYVS DVVRMATEVH KTEKEGTILA FLTSQIEVEW
0501: ACEKFQAPSA VALPLHGKLS SDEQFRVFQN YTGKRKVIFS TNLAETSLTI PGVRYVIDSG LVKDSRFDPG SGMNVLKVCW ISQSSADQRA GRAGRTEPGV
0601: CYRLYTEADY QSMDLNQEPE IRRVHLGVAV LRILALGVKD VQGFDFVDAP SPSSIDMAIR NLIQLGAIEL NNDVHDLTSE GWCLVRMGIE PRLGKLILGC
0701: FKHGLGREGI ILAAVMANAS SIFCRVGNEF DKQRSDCLKV QFCHCDGDLF TLLSVYKEWE ALPRERKNKW CWENSINAKS MRRCQDTILE LETCLEREHD
0801: VVTPSYWRWD PCMPSNHDKN LKRVILFSLA ENVAMYSGCN QLGYEVAQTG QHVQLHPSCS LLVFAQKPSW VVFGELLSIS NQYLVCVSAF DFQSLYDLCP
0901: APLFDVSKME ERKLLMKTLS GLGCILLKRF CGKANCNLLA LVSRIRKACM DERIFIEVNV DNNEIHLYAS SNDMDIALGL VNDVLEYERK WLRTECMDKF
1001: LYHGSGFSPP VALFGSGAEI KHLELEKRSL SVDVCHPNIN EIDDKELLMF FEKNTSGCIC AVHKFTGNTR DEDRDKWGRI TFMSPDIVRR AAELDGREFC
1101: GSSLKVVPSQ LGGDKTFSFP AVKARISWPR RLSRGFAIVK CDIKDVDYIL RDFYNLAVGG RYVRCEVGKK SMDSVVINGL DKELSEAEIS DVLRTATTRR
1201: ILDFFLVRGE AVGNPPCSAL EEALLKEIYP FLPKRNPHIS PCRVQVFAPE PKDAFMRALI TFDGRLHLEA AKALEQIEGK VLPGCLSWQK IKCQQLFHSS
1301: LTFPTPVYRV IKEQLDEVLA SFRNLKGLEC NLDRTFNGSH RVKITANATR TVAEVRRPLE ELLRGKTIEH DSLTPAVLQL MLSRDGFSLK NSLQQETGTY
1401: ILFDRHNLNL RVFGSPNMVA LAQEKVIQSL LSLHEEKQLE IHLRGRDLPP DLMKQMIKNF GPDLHGLKER VPGVDLTLNI RRHIIILHGS KELKPRVEEI
1501: VFEIARSSHH LVERFGNGPS CPICLCEVED GYRLEGCGHL FCRMCLVEQF ESAIKNQGTF PVCCTHRDCG DPILLTDLRS LLFGDKLEDL FRASLGAFVA
1601: TSGGTYRFCP SPDCPSIYRV ADPGSAGEPF VCRACYSETC TRCHLEYHPY LSCERYKEFK EDPDSSLIEW CRGKEQVKCC SACGYVIEKV DGCNHVECKC
1701: GKHVCWVCLE FFSTSNDCYD HLRTIHLTI
Best Arabidopsis Sequence Match ( AT5G10370.1 )
(BLAST)
0001: MRNSFPPSDG GRSATDRRQQ SSHSSSTNRY NSRSAQSSPP LNHRPTWNQQ HSQYPNSNFP PNYRRDRNPS SGYSPPVTRA RPNFIVQLLH PAAANSDTKL
0101: CFSTKKQEIE SLALLCEIPE ESIHVPQFGC IAGSFSFRQW VDARSAVVAL WDYRLQGKHE FVPELIPNVI VPSDMNELKD RLRDLFSSHI LSLMENGEGV
0201: KKVRLEIEEK SRQVVSFSSK RGLKFEVFEK KKAIEAERDL VVNRLEEFNN AMKSILRYLI GQDGYEFDLD DEEEGDVAVF CLEGAYDWRR IHCLIRRECR
0301: RLEDGLPIYA YRRQILKKIH REQIMVLIGE TGSGKSTQLV QFLADSGVAA SESIVCTQPR KIAAMTLADR VREESSGCYE ENTVSCTPTF SSTEEISSKV
0401: VYMTDNCLLQ HYMKDRSLSG ISCVIIDEAH ERSLNTDLLL ALLKKLLSRR IDLRLVIMSA TADAKQLSQY FFSCGILLVN GRNFPVEIVY SPSDTEENSV
0501: VGGIASYVGD VVKMAVEIHK TEKEGTILAF LTSQAEVEWA CERFITPSAI ALPLHGKLSF EEQFRVFQNH PGRRKVIFAT NIAETSLTIP GVKYVIDSGM
0601: VKESKYEPRT GMSILKVCRV SQSSARQRAG RAGRTEPGRC YRLYSKNDFD SMNLNQEPEI RRVHLGVALL RMLALGVNNI AEFNFVDAPV PEAIAMAVQN
0701: LVQLGAVVEK NGVHELTQEG HCLVKLGLEP KLGKLILGCF RHRMGKEGIV LAAVMANASS IFCRVGNFDD KMKADRLKVQ FCNQNGDLFT LLSVYKEWAS
0801: LPRERRNKWC WENSLNAKSM RRCEDTVKEL EICIERELTL VSPSYWVWNP NEGTKHDKHL KMVILASLAE NVAMYTGYNQ LGYEVALTGQ QVQLHPSCSL
0901: LAFGQKPSWV VFGELLSIVD QYLVCVTACD FEALYMLDPP PPFDVSQMDE RRLRIKKVVG CSSTVLKRFC GKSNRSLLSI VSRARSLCSD ERIGIQVDVD
1001: QNEIRLYAPP LDMEKVSALV NDALECEKKW MHNECLEKYL YHGRGQVPIA LFGSGAQIKH LEVDQRFLTV DVLYYGDDVV DDRELLTFLE KKIDGSICSI
1101: YKFAANKQDC DEKEKWGRIT FLTPESAMKA TEIQKFYFKG SVLKLFPSLS TGGGIFKMPY FSSVTAKIRW PRRESSGRGC LKCPSGDIHR ILGDISSLEI
1201: GTNYVHIQRD QQSNDSILIS GLGDLSEAEV LDVLEFRTQR RDLNFFIFRK KYSVQCPSPT ACEEELHKRI FARMSAKNPE PNCVQVQVFE PKEDNYFMRA
1301: LIKFDGRLHF EAAKALQELN GEVLPGCLPW QKIKCEQLFQ SSIICSASIY NTVKRQLNVL LARFERQKGG ECCLEPTHNG AYRVKITAYA TRPVAEMRRE
1401: LEELLRGRPI NHPGFTRRVL QHLMSRDGIN LMRKIQQETE TYILLDRHNL TVRICGTSEK IAKAEQELIQ ALMDYHESKQ LEIHLRGPEI RPDLMKEVVK
1501: RFGPELQGIK EKVHGVDLKL NTRYHVIQVH GSKEMRQEVQ KMVNELAREK SALGEKPDEI EVECPICLSE VDDGYSLEGC SHLFCKACLL EQFEASMRNF
1601: DAFPILCSHI DCGAPIVLAD MRALLSQEKL DELFSASLSS FVTSSDGKFR FCSTPDCPSV YRVAGPQESG EPFICGACHS EICTRCHLEY HPLITCERYK
1701: KFKENPDLSL KDWAKGKNVK ECPICKSTIE KTDGCNHMKC RCGKHICWTC LDVFTQEEPC YAHLRTIHGG IGLVE
Arabidopsis Description
ATP-dependent RNA helicase DEAH12, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4KGU4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.