Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d022176_P002 | Maize | nucleus | 90.24 | 78.14 |
| Os07t0621500-01 | Rice | cytosol, nucleus | 65.79 | 77.54 |
| TraesCS5B01G080500.1 | Wheat | nucleus | 63.94 | 73.32 |
| TraesCS2D01G171200.2 | Wheat | nucleus | 75.61 | 65.69 |
| TraesCS2B01G190100.1 | Wheat | nucleus | 74.95 | 65.57 |
| TraesCS5D01G087800.2 | Wheat | nucleus | 72.18 | 65.37 |
| TraesCS5A01G074100.1 | Wheat | nucleus | 71.98 | 65.0 |
| TraesCS3B01G129700.1 | Wheat | nucleus | 68.62 | 64.02 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 71.59 | 63.58 |
| TraesCS3A01G111000.1 | Wheat | nucleus | 73.5 | 63.57 |
| TraesCS2A01G164100.1 | Wheat | nucleus | 75.41 | 63.17 |
| TraesCS3D01G112900.1 | Wheat | nucleus | 55.5 | 62.98 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 75.68 | 62.9 |
| GSMUA_Achr8P17640_001 | Banana | nucleus | 50.69 | 62.42 |
| PGSC0003DMT400041805 | Potato | nucleus | 51.88 | 48.52 |
| KRG97543 | Soybean | nucleus, plastid | 54.25 | 47.6 |
| KRH31333 | Soybean | nucleus, plastid | 53.79 | 47.0 |
| PGSC0003DMT400060759 | Potato | nucleus | 53.46 | 46.91 |
| Solyc04g014210.2.1 | Tomato | nucleus | 53.46 | 46.88 |
| Solyc11g010310.1.1 | Tomato | nucleus | 52.08 | 46.33 |
| VIT_07s0191g00210.t01 | Wine grape | nucleus | 51.75 | 45.19 |
| AT5G10370.1 | Thale cress | nucleus | 49.7 | 42.48 |
| Bra006057.1-P | Field mustard | plastid | 48.98 | 42.34 |
| CDX81170 | Canola | plastid | 49.18 | 42.31 |
| AT4G01020.1 | Thale cress | nucleus | 49.84 | 42.31 |
| CDX78376 | Canola | plastid | 48.98 | 42.29 |
| CDX96996 | Canola | nucleus | 48.52 | 41.61 |
| CDX69841 | Canola | plastid | 48.45 | 41.6 |
| Bra009038.1-P | Field mustard | plastid | 48.38 | 41.54 |
| OQU86123 | Sorghum | nucleus | 14.5 | 31.43 |
| KXG22666 | Sorghum | nucleus | 13.97 | 30.07 |
| EER87951 | Sorghum | nucleus, plastid | 13.97 | 30.07 |
| KXG39505 | Sorghum | cytosol | 14.11 | 29.64 |
| EES15324 | Sorghum | nucleus | 15.82 | 22.41 |
| KXG30390 | Sorghum | nucleus | 14.57 | 21.13 |
| KXG37551 | Sorghum | nucleus, vacuole | 15.95 | 21.01 |
| EES02741 | Sorghum | nucleus | 14.37 | 20.84 |
| KXG38358 | Sorghum | nucleus | 14.17 | 20.75 |
| OQU77934 | Sorghum | nucleus | 14.37 | 20.45 |
| EER95349 | Sorghum | nucleus | 15.95 | 19.48 |
| KXG36287 | Sorghum | nucleus | 15.82 | 18.68 |
| KXG32067 | Sorghum | mitochondrion | 14.96 | 18.29 |
| KXG30805 | Sorghum | nucleus | 14.11 | 16.77 |
| EES01523 | Sorghum | nucleus | 12.85 | 16.32 |
| KXG26332 | Sorghum | nucleus, plastid | 13.45 | 14.31 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:1.20.120.1750 | MapMan:19.2.2.1.5.4.3 | Gene3D:3.30.40.10 | Gene3D:3.40.50.300 | UniProt:A0A1W0W7A8 |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 |
| GO:GO:0046872 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IBR_dom | InterPro:IPR001650 |
| InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR014001 | EnsemblPlants:OQU90279 | ProteinID:OQU90279 | ProteinID:OQU90279.1 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF01485 | PFAM:PF04408 | PFAM:PF07717 |
| ScanProsite:PS00518 | ScanProsite:PS00690 | PFscan:PS50089 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 |
| PANTHER:PTHR18934:SF81 | InterPro:RBD_domain_sf | SMART:SM00487 | SMART:SM00490 | SMART:SM00647 | SMART:SM00847 |
| EnsemblPlantsGene:SORBI_3002G378900 | SUPFAM:SSF52540 | SUPFAM:SSF54928 | SUPFAM:SSF57850 | UniParc:UPI0009DC93A7 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:73500965..73510492
Molecular Weight (calculated)
169225.0 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.141
Length
1517 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSIQRAMSP GSGDKEEGVN LFGAVEGADV DFVRVHMMLL RECRRLKEGL PIYAYRRRIL NHILANQVMV LIGETGSGKS TQLVQFLADS GLAGGGSIIC
0101: TQPRKLAAIS LAHRVDEESK GCYGERSVLS YSTLLNSPQG FGTKIIFTTD SCLLHYCMSD RSLNGISYII IDEAHERSLN TDLLLAMIKK KLLDRLDMRL
0201: IIMSATADAD RLAEYFYGCQ TFHVKGRTFP VEIKYVPDIS AEASLNSVSS MSSVASATAS YVTDVVQMVN IIHKNEEEGA ILAFLTSQLE VEWACETFSD
0301: PNAVVLPMHG KLSSVEQNLV FKSYPGKRKI IFCTNIAETS LTIKEVKYVV DCGLAKEYRF VPSSGLNVLK VNWISQSSAN QRAGRAGRTG AGKCYRLYPE
0401: SDFGMMEAHQ EPEIRKVHLG TAVLRILALG VTDVKYFEFI DAPDPEAINM AVHNLEQLGA IEYKCSGFEL TDTGRDLVKL GIEPRLGKIM LDCFSYGLMK
0501: EGLVLASVMA NASSIFCRVG TNEEKYKADR LKVPFCHPDG DLFTSLAVYK KWEAGHDNKN MWCWQNCINA KTLRRCQETI SELEKCLMHE LNIIVPSYWS
0601: WNPEEPTMHD TSLKKIILSS LRGNLAMFSG HEKFGYQVIS ADQPVQLHPS CSLLTYGSKP EWVVFSEILS VPNQYLVCVT AVDRNDVCTV HSMSSFIKQL
0701: EESKLQRKVI TGIGNKSLRR FCGKCGQNLQ KIISLLREDC RDDRIMVDLD FSSSEVSLFA KEHDMEAVFC MVNDALELEA KMLRDECDER RCGGSTIALF
0801: GSGAEIKHLE LGKRCLTVEI LHQNARDIDE KELIGLVYSH VPGIANFHKL GNFQSNADET KWGRFTFLKP DFADDAISKL NGIEFHGSSL KVGPVSAYNH
0901: SGLPFPAVRA KVSWPRKPSR GLALVTCASG EAEFIVKDCF ALGVGGRYIN CEISKKYANC VFVTGVPLHV TEPELYDAFR STTTRRILDI RLLRGAPTAS
1001: SSDSECAEAL MRAISLFMPN RNFPGQNFRV HVIPPEEKDS MMRATITFDG SFHREAARAL DHLQGSVLPC CLPWQIIQCQ HVFHSTVSCP MRIYNVISQE
1101: VGVLLESFRS EKGVSYNLEK NENGHFRVKL TANATKTIAD LRRPLELLMK GKIINHPDLM LSTVQLLWSR DGMEHLKSVE QETGTYILYD RQSLNIKVFG
1201: STDKVAAAEE KLVRALIQLH EKKPLEVCLR GQNLPPNLMK EVIKKFGADL EGLKSEVPAV DLQLNTRRQT LYVRGSKEDK QRVEEMISEL IASSDHNAPL
1301: PSKNACPICL CELEDPFKLE SCGHMFCLAC LVDQCESAMK SQDGFPLCCL KNGCKKLLLL ADLRSLVPDK LDELFRASLN AFVASSAGLY RFCPTPDCTS
1401: IYQVAAAGAE DKPFVCGACS VETCTKCHLE YHPFISCEAY KEYKADPADA TLLQWRKGKE NVKNCPKCGY TIEKAEGCNH VECRCGCHIC WNCLENFKSS
1501: EECYGHLRVL LTCCGNN
0101: TQPRKLAAIS LAHRVDEESK GCYGERSVLS YSTLLNSPQG FGTKIIFTTD SCLLHYCMSD RSLNGISYII IDEAHERSLN TDLLLAMIKK KLLDRLDMRL
0201: IIMSATADAD RLAEYFYGCQ TFHVKGRTFP VEIKYVPDIS AEASLNSVSS MSSVASATAS YVTDVVQMVN IIHKNEEEGA ILAFLTSQLE VEWACETFSD
0301: PNAVVLPMHG KLSSVEQNLV FKSYPGKRKI IFCTNIAETS LTIKEVKYVV DCGLAKEYRF VPSSGLNVLK VNWISQSSAN QRAGRAGRTG AGKCYRLYPE
0401: SDFGMMEAHQ EPEIRKVHLG TAVLRILALG VTDVKYFEFI DAPDPEAINM AVHNLEQLGA IEYKCSGFEL TDTGRDLVKL GIEPRLGKIM LDCFSYGLMK
0501: EGLVLASVMA NASSIFCRVG TNEEKYKADR LKVPFCHPDG DLFTSLAVYK KWEAGHDNKN MWCWQNCINA KTLRRCQETI SELEKCLMHE LNIIVPSYWS
0601: WNPEEPTMHD TSLKKIILSS LRGNLAMFSG HEKFGYQVIS ADQPVQLHPS CSLLTYGSKP EWVVFSEILS VPNQYLVCVT AVDRNDVCTV HSMSSFIKQL
0701: EESKLQRKVI TGIGNKSLRR FCGKCGQNLQ KIISLLREDC RDDRIMVDLD FSSSEVSLFA KEHDMEAVFC MVNDALELEA KMLRDECDER RCGGSTIALF
0801: GSGAEIKHLE LGKRCLTVEI LHQNARDIDE KELIGLVYSH VPGIANFHKL GNFQSNADET KWGRFTFLKP DFADDAISKL NGIEFHGSSL KVGPVSAYNH
0901: SGLPFPAVRA KVSWPRKPSR GLALVTCASG EAEFIVKDCF ALGVGGRYIN CEISKKYANC VFVTGVPLHV TEPELYDAFR STTTRRILDI RLLRGAPTAS
1001: SSDSECAEAL MRAISLFMPN RNFPGQNFRV HVIPPEEKDS MMRATITFDG SFHREAARAL DHLQGSVLPC CLPWQIIQCQ HVFHSTVSCP MRIYNVISQE
1101: VGVLLESFRS EKGVSYNLEK NENGHFRVKL TANATKTIAD LRRPLELLMK GKIINHPDLM LSTVQLLWSR DGMEHLKSVE QETGTYILYD RQSLNIKVFG
1201: STDKVAAAEE KLVRALIQLH EKKPLEVCLR GQNLPPNLMK EVIKKFGADL EGLKSEVPAV DLQLNTRRQT LYVRGSKEDK QRVEEMISEL IASSDHNAPL
1301: PSKNACPICL CELEDPFKLE SCGHMFCLAC LVDQCESAMK SQDGFPLCCL KNGCKKLLLL ADLRSLVPDK LDELFRASLN AFVASSAGLY RFCPTPDCTS
1401: IYQVAAAGAE DKPFVCGACS VETCTKCHLE YHPFISCEAY KEYKADPADA TLLQWRKGKE NVKNCPKCGY TIEKAEGCNH VECRCGCHIC WNCLENFKSS
1501: EECYGHLRVL LTCCGNN
0001: MRNSFPPSDG GRSTTDRRQQ SFPSSSTNRY NSRSAQSSPP LNHCTTWNQQ HSQYHNTNFP PNYRRDRAPS SGFSPPVTRA RPNFIVQLLH PAAANSDTKL
0101: SKKQEIESIA LLCEIPEESV HVPQFGCIAA SFSFRQWVDA RSAVVALWDY RLQGRHDFVP ELIPNVVVPS DMDELKDRLR DLFSSHVLSL MENGQGVKKV
0201: RMEIDDKSRQ VASFSSKRGL KFEVFEKKKA LEAERDLVVN RLDEFNNAMK SILRYLIGQD GYEFDVDDED DEDVAVFSLE GAYDWRRIHY LILRECRRLE
0301: DGLPIYAYRR QILKKIHCEQ IMVLIGETGS GKSTQLVQFL ADSGVAASES IVCTQPRKIA AMTLTDRVRE ESSGCYEENT VSCTPTFSST EEISSKVVYM
0401: TDNCLLQHYM KDRSLSGISC VIIDEAHERS LNTDLLLALL RKLLSRRIDL RLVIMSATAD ANQLSQYLFD CGILHVNGRN FPVEIVYSPS GTEENSVVGR
0501: IASYAGDVVK MAVEIHKTEK EGTILAFLTS QAEVEWACER FVAPSAIALP LHGKLSFEEQ FMVFQNYPGR RKVIFATNIA ETSLTIPGVK YVIDSGMVKE
0601: SKYEPRTGMS ILKVCQVSQS SARQRAGRAG RTEPGRCYRL YSKTDFDSMN LNQEPEIRRV HLGVALLRML ALGIDNIAAF EFVDAPVPEA IAMAIQNLVQ
0701: LGAVVEKNGV LELTQEGHCL VKLGLEPKLG KLILGCFRHR MGKEGIVLAA VMANASSIFC RVGNFDDKMK ADRLKVQFCN DNGDLFTLLS VYKEWASLPR
0801: DRRNKWCWEN SLNAKSMRRC EDTVKELEIC IERELTLVSP SYWVWNPNEG TKHDKYLKMV ILASLAENVA MYTGYDQLGY EVALTSQQVQ LHPSCSLLAF
0901: GQKPSWVVFG ELLSIVDQYL VCVTAFDFEA LYMLDPPPPF DASQMDERRL RVKKVVGCSS TVLKRFCGKS NRSLLSIVSR ARSLCSDERI GIQVDVDQNE
1001: IRLYASPLDM EKVSALVNDA LECEKKWMRN ECLEKYLFHG RGQIPIALFG SGAQIKHLEV DQRFLTVDVH YYGDDVVDDR ELLTFLEKKI DGCICSIYKF
1101: AANKQDCDEK EKWGRITFLT PESAMKATEI QKFDFKGSVL KVFPSLSTGG GIFKMPYFSS VTAKIRWPRK ESSGRGCLKC PSGDIHSILG DITSLEIGTN
1201: YVHIQRDQLS NDSILISGLG DLSEAEVLDV LEFRTQRRDL NFFIFRKKYS VQCPSPTACE EELHKRIFAR MSAKNPEPNC VQVQVFEPKE DNYFMRALIK
1301: FDGRLHLEAA KALQELNGEV LPGCLPWQKI KCEQLFQSSI ICSASIYNTV KRQLNVLLAR FERQKGGECC LEPTHNGAYR VKITAYATRP VAEMRRELEE
1401: LLRGKPINHP GFTPRVVQHL MSRDGINLMR KIQQETETYI LLDRHNLTVR ICGTSEKIAK AEQELVQSLM DYHESKQLEI HLRGPEIRPD LMKEVVKRFG
1501: PELQGIKEKV HGVDLKLNTR YHVIQVHGSK EMRQEVQKMV NELAREKSAL GEKPDEIELE CPICLSEVDD GYSLEGCSHL FCKACLLEQF EASMRNFDAF
1601: PILCSHIDCG APIVVADMRA LLSQEKLDEL ISASLSAFVT SSDGKLRFCS TPDCPSIYRV AGPQESGEPF ICGACHSETC TRCHLEYHPL ITCERYKKFK
1701: ENPDLSLKDW AKGKDVKECP ICKSTIEKTD GCNHLQCRCG KHICWTCLDV FTQAEPCYAH LRTIHGGIGL VELGVPEHPV AQPVHRL
0101: SKKQEIESIA LLCEIPEESV HVPQFGCIAA SFSFRQWVDA RSAVVALWDY RLQGRHDFVP ELIPNVVVPS DMDELKDRLR DLFSSHVLSL MENGQGVKKV
0201: RMEIDDKSRQ VASFSSKRGL KFEVFEKKKA LEAERDLVVN RLDEFNNAMK SILRYLIGQD GYEFDVDDED DEDVAVFSLE GAYDWRRIHY LILRECRRLE
0301: DGLPIYAYRR QILKKIHCEQ IMVLIGETGS GKSTQLVQFL ADSGVAASES IVCTQPRKIA AMTLTDRVRE ESSGCYEENT VSCTPTFSST EEISSKVVYM
0401: TDNCLLQHYM KDRSLSGISC VIIDEAHERS LNTDLLLALL RKLLSRRIDL RLVIMSATAD ANQLSQYLFD CGILHVNGRN FPVEIVYSPS GTEENSVVGR
0501: IASYAGDVVK MAVEIHKTEK EGTILAFLTS QAEVEWACER FVAPSAIALP LHGKLSFEEQ FMVFQNYPGR RKVIFATNIA ETSLTIPGVK YVIDSGMVKE
0601: SKYEPRTGMS ILKVCQVSQS SARQRAGRAG RTEPGRCYRL YSKTDFDSMN LNQEPEIRRV HLGVALLRML ALGIDNIAAF EFVDAPVPEA IAMAIQNLVQ
0701: LGAVVEKNGV LELTQEGHCL VKLGLEPKLG KLILGCFRHR MGKEGIVLAA VMANASSIFC RVGNFDDKMK ADRLKVQFCN DNGDLFTLLS VYKEWASLPR
0801: DRRNKWCWEN SLNAKSMRRC EDTVKELEIC IERELTLVSP SYWVWNPNEG TKHDKYLKMV ILASLAENVA MYTGYDQLGY EVALTSQQVQ LHPSCSLLAF
0901: GQKPSWVVFG ELLSIVDQYL VCVTAFDFEA LYMLDPPPPF DASQMDERRL RVKKVVGCSS TVLKRFCGKS NRSLLSIVSR ARSLCSDERI GIQVDVDQNE
1001: IRLYASPLDM EKVSALVNDA LECEKKWMRN ECLEKYLFHG RGQIPIALFG SGAQIKHLEV DQRFLTVDVH YYGDDVVDDR ELLTFLEKKI DGCICSIYKF
1101: AANKQDCDEK EKWGRITFLT PESAMKATEI QKFDFKGSVL KVFPSLSTGG GIFKMPYFSS VTAKIRWPRK ESSGRGCLKC PSGDIHSILG DITSLEIGTN
1201: YVHIQRDQLS NDSILISGLG DLSEAEVLDV LEFRTQRRDL NFFIFRKKYS VQCPSPTACE EELHKRIFAR MSAKNPEPNC VQVQVFEPKE DNYFMRALIK
1301: FDGRLHLEAA KALQELNGEV LPGCLPWQKI KCEQLFQSSI ICSASIYNTV KRQLNVLLAR FERQKGGECC LEPTHNGAYR VKITAYATRP VAEMRRELEE
1401: LLRGKPINHP GFTPRVVQHL MSRDGINLMR KIQQETETYI LLDRHNLTVR ICGTSEKIAK AEQELVQSLM DYHESKQLEI HLRGPEIRPD LMKEVVKRFG
1501: PELQGIKEKV HGVDLKLNTR YHVIQVHGSK EMRQEVQKMV NELAREKSAL GEKPDEIELE CPICLSEVDD GYSLEGCSHL FCKACLLEQF EASMRNFDAF
1601: PILCSHIDCG APIVVADMRA LLSQEKLDEL ISASLSAFVT SSDGKLRFCS TPDCPSIYRV AGPQESGEPF ICGACHSETC TRCHLEYHPL ITCERYKKFK
1701: ENPDLSLKDW AKGKDVKECP ICKSTIEKTD GCNHLQCRCG KHICWTCLDV FTQAEPCYAH LRTIHGGIGL VELGVPEHPV AQPVHRL
Arabidopsis Description
ATP-dependent RNA helicase DEAH11, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0CE10]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.