Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G254900.1 | Wheat | nucleus | 72.05 | 72.45 |
| HORVU1Hr1G056370.1 | Barley | nucleus | 72.14 | 72.34 |
| HORVU1Hr1G056400.1 | Barley | nucleus | 72.14 | 72.21 |
| TraesCS1A01G243400.1 | Wheat | nucleus | 71.76 | 72.17 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 71.67 | 72.01 |
| Os05t0389800-01 | Rice | nucleus | 72.23 | 71.96 |
| EES02741 | Sorghum | nucleus | 63.98 | 65.2 |
| KXG30390 | Sorghum | nucleus | 63.88 | 65.11 |
| KXG39505 | Sorghum | cytosol | 32.65 | 48.2 |
| OQU86123 | Sorghum | nucleus | 29.64 | 45.14 |
| KXG22666 | Sorghum | nucleus | 29.74 | 44.96 |
| EER87951 | Sorghum | nucleus, plastid | 25.33 | 38.3 |
| EES15324 | Sorghum | nucleus | 37.34 | 37.16 |
| EER95349 | Sorghum | nucleus | 39.31 | 33.74 |
| KXG36287 | Sorghum | nucleus | 35.18 | 29.18 |
| KXG38358 | Sorghum | nucleus | 23.92 | 24.61 |
| KXG37551 | Sorghum | nucleus, vacuole | 23.26 | 21.53 |
| KXG30805 | Sorghum | nucleus | 25.14 | 21.0 |
| KXG32067 | Sorghum | mitochondrion | 23.17 | 19.9 |
| EES01523 | Sorghum | nucleus | 19.98 | 17.82 |
| KXG26332 | Sorghum | nucleus, plastid | 22.42 | 16.76 |
| OQU90279 | Sorghum | nucleus | 20.45 | 14.37 |
Protein Annotations
| Gene3D:1.20.120.1080 | MapMan:16.4.7.1.5 | Gene3D:3.40.50.300 | UniProt:A0A1Z5R2D1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlants:OQU77934 | ProteinID:OQU77934 | ProteinID:OQU77934.1 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF117 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | EnsemblPlantsGene:SORBI_3009G125100 | SUPFAM:SSF52540 | UniParc:UPI000B8BA2B2 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:-:47815990..47819190
Molecular Weight (calculated)
119729.0 Da
IEP (calculated)
5.303
GRAVY (calculated)
-0.566
Length
1066 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESGERQLKT WVSDRLMALL GYSQGIVVQL VVRLAQDCAS AGELAARLVD LGGFPSSPDT VAFAEDVYGR IPRKQGTAAG AGAVGSEYQR QMQEAAALAK
0101: KQSEFKLLAD DDGEAAGVAA SSCKSRKRFR KKGVPVPQQD DEEAAALSDS GRDQRRRRRR CPESDEDADD LGDEEEEMRR DQAEKAQLER NIRERDEANT
0201: RKLMDRKPSR HEQEEQARRS EAMDRGDTSE LRRHSRYEYL KKRKEEKMGE LQRVIDDNEF LFDGVRLTDA EERELQHKKE IYNLIVQDRR ADQDEGAADY
0301: YRMPDAYDDA ANVDQSSRFS VARRRHDDDD REARGAKGKA FSEQESWEEQ QIRKSCLQFG SKDRSGASDE YELVFDDAVE FVKSAAAMAG TELDEETDEL
0401: ADEIDAKVTL QRELQDERKT LPVYKFKDEL LKAIAEHQII VVVGETGSGK TTQIPQYLHE AGYTANGLKI ACTQPRRVAA MSVAARVAQE MGVKLGHEVG
0501: YSIRFEDCTS EKTVVKYMTD GTLLREFLGE PDLASYGVVI VDEAHERTLT TDILLGLVKD VARFRPDLKL LISSATLNAE KFSDYFDMAP VFKIPGRRYK
0601: VDIHYTVAPE ADYVDAAVAT VLQLHVTQPP GDILVFLTGQ EEIETVEEIL RRRTRGLGSK IAELVICPIY ANLPTELQAK IFEPAPPGAR KVVLATNIAE
0701: TSLTIDGISY VVDPGFCKVK LYRPRTGTES LLVHPISKAS ADQRAGRSGR TGPGKCFRLF TEYSYNKDME DETVAEIRRS NLANVVLSLK ALGINDLVSF
0801: DFMDPPASEA LLKALEDLFA LGALNSRGEL TKTGRRMAEL PLDPMMAKAI VASERYGCSE EVVTIAAMLS AGNAVFYRPR DKALVADAAR QRFNAGGVGD
0901: HIALLNVYTE WEESGHSAQW CLDHFVQPRT MRRARDVREQ LEALLERVEI ERRSSAGDLD AVRKAITAGF FRNTAQLRRQ DGSYRTVKSW RTVFLHPSSG
1001: MARVEPAPRW VLYHELVETT KEYMRQVTEL KPEWLLEIAP HYYQDKNLET PEPKKKAKAH LQSATA
0101: KQSEFKLLAD DDGEAAGVAA SSCKSRKRFR KKGVPVPQQD DEEAAALSDS GRDQRRRRRR CPESDEDADD LGDEEEEMRR DQAEKAQLER NIRERDEANT
0201: RKLMDRKPSR HEQEEQARRS EAMDRGDTSE LRRHSRYEYL KKRKEEKMGE LQRVIDDNEF LFDGVRLTDA EERELQHKKE IYNLIVQDRR ADQDEGAADY
0301: YRMPDAYDDA ANVDQSSRFS VARRRHDDDD REARGAKGKA FSEQESWEEQ QIRKSCLQFG SKDRSGASDE YELVFDDAVE FVKSAAAMAG TELDEETDEL
0401: ADEIDAKVTL QRELQDERKT LPVYKFKDEL LKAIAEHQII VVVGETGSGK TTQIPQYLHE AGYTANGLKI ACTQPRRVAA MSVAARVAQE MGVKLGHEVG
0501: YSIRFEDCTS EKTVVKYMTD GTLLREFLGE PDLASYGVVI VDEAHERTLT TDILLGLVKD VARFRPDLKL LISSATLNAE KFSDYFDMAP VFKIPGRRYK
0601: VDIHYTVAPE ADYVDAAVAT VLQLHVTQPP GDILVFLTGQ EEIETVEEIL RRRTRGLGSK IAELVICPIY ANLPTELQAK IFEPAPPGAR KVVLATNIAE
0701: TSLTIDGISY VVDPGFCKVK LYRPRTGTES LLVHPISKAS ADQRAGRSGR TGPGKCFRLF TEYSYNKDME DETVAEIRRS NLANVVLSLK ALGINDLVSF
0801: DFMDPPASEA LLKALEDLFA LGALNSRGEL TKTGRRMAEL PLDPMMAKAI VASERYGCSE EVVTIAAMLS AGNAVFYRPR DKALVADAAR QRFNAGGVGD
0901: HIALLNVYTE WEESGHSAQW CLDHFVQPRT MRRARDVREQ LEALLERVEI ERRSSAGDLD AVRKAITAGF FRNTAQLRRQ DGSYRTVKSW RTVFLHPSSG
1001: MARVEPAPRW VLYHELVETT KEYMRQVTEL KPEWLLEIAP HYYQDKNLET PEPKKKAKAH LQSATA
0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM
Arabidopsis Description
ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.