Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003655_P006 | Maize | nucleus, plastid | 95.23 | 95.37 |
| Os04t0432200-00 | Rice | extracellular | 4.56 | 89.04 |
| TraesCS2A01G304100.1 | Wheat | nucleus, plastid | 84.08 | 83.9 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 83.87 | 83.75 |
| TraesCS2D01G302700.1 | Wheat | plastid | 83.38 | 83.2 |
| GSMUA_Achr6P17860_001 | Banana | nucleus | 62.2 | 62.33 |
| VIT_12s0035g00800.t01 | Wine grape | nucleus | 53.23 | 55.44 |
| Solyc01g103690.2.1 | Tomato | nucleus | 55.19 | 54.73 |
| KRH01863 | Soybean | nucleus | 54.7 | 54.24 |
| AT1G58060.1 | Thale cress | nucleus | 54.07 | 52.84 |
| CDY39917 | Canola | nucleus | 52.03 | 52.51 |
| CDY29164 | Canola | nucleus | 52.17 | 52.25 |
| Bra027890.1-P | Field mustard | nucleus | 47.05 | 50.45 |
| AT1G58050.1 | Thale cress | nucleus | 48.6 | 48.91 |
| CDY63687 | Canola | nucleus, plastid | 33.73 | 43.33 |
| KXG38358 | Sorghum | nucleus | 25.6 | 35.23 |
| KXG37551 | Sorghum | nucleus, vacuole | 24.82 | 30.73 |
| KXG22666 | Sorghum | nucleus | 15.15 | 30.64 |
| KXG39505 | Sorghum | cytosol | 15.36 | 30.33 |
| OQU86123 | Sorghum | nucleus | 14.52 | 29.57 |
| KXG32067 | Sorghum | mitochondrion | 25.39 | 29.17 |
| EER87951 | Sorghum | nucleus, plastid | 13.81 | 27.94 |
| EES01523 | Sorghum | nucleus | 21.18 | 25.27 |
| KXG30390 | Sorghum | nucleus | 17.39 | 23.71 |
| EES02741 | Sorghum | nucleus | 17.39 | 23.71 |
| EES15324 | Sorghum | nucleus | 17.04 | 22.69 |
| OQU77934 | Sorghum | nucleus | 16.76 | 22.42 |
| EER95349 | Sorghum | nucleus | 17.18 | 19.73 |
| KXG36287 | Sorghum | nucleus | 17.46 | 19.38 |
| KXG30805 | Sorghum | nucleus | 15.43 | 17.24 |
| OQU90279 | Sorghum | nucleus | 14.31 | 13.45 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A1B6PKY5 | ncoils:Coil |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlants:KXG26332 | ProteinID:KXG26332 | ProteinID:KXG26332.1 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF190 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 |
| EnsemblPlantsGene:SORBI_3006G083300 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | UniParc:UPI00081AE5B5 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr6:-:45202932..45228805
Molecular Weight (calculated)
158689.0 Da
IEP (calculated)
6.579
GRAVY (calculated)
-0.406
Length
1426 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPKKKQPAS KQKQKPKSSS ASSSSSSAAT AAPRLQISSE NERRLRRLLL NSSAASTPSP APADGPEARG ESREQKARRL RGVYDKLALE GFSSAQIEQA
0101: LSAIPDSATF ESALDWLCFN LPGDELPLKF SSAGTSTTSL AGAEGSVKVL STAKDNWVPQ SREPEEVKVS TEGLEVRIGG RKDENVSLDD GRSSQAAWIR
0201: QYMEQQEEED DANSNDSSTW EDHCLQSFEV VEAKPSRRKS KAAKKNSKHG SSKEQISHSS NSVSSNSETA NVEGVQNDLE ASEKRSESLG NIDEGSDLKK
0301: AIPKDIDKTC TNEVDEEVVE LDNMFFEDSS AWEAVAPEIL KQQQIEKLSL DGYGHLLGNI DDIWKKGDSG KMPKAVLQKF CQKLGWEAPK YNKISERDGK
0401: FVYSVNVLRG ATGRGKSWKA GGLTKIQLPE LDEEYGSVQE AQSRVAAFAL YQFFADLPLR QLLTEPYSSL ILRWQEGELS STSRVLDTED SRRSGFVDML
0501: LNIDADTIPS SEIENSSADG ISMDSGNTEG SKSLNEKRQT SMKSSMADHA ESAILKKQLE DKRKLPNYLK MLEARASLPI ARQKQHFLQL LKENDVVVVS
0601: GETGCGKTTQ VPQFILDDMI ESELGGSCNI VCTQPRRIAA ISVAERVSDE RCESSPGSND SLVGYQVRLD SARNERTKLL FCTTGILLRK LSGNRDLSDV
0701: THVVVDEVHE RTILSDFLLI VLKNLVEKRS NQQGRKLKVI LMSATVDSSL FARYFGECPV ISVEGRTHPV STHFLEDVYE KMEYCLALDS PASGAYFAQH
0801: GEKWKHASSS VNNRRGKKNL VLSSWGDESM LSEGYINPHY ISDYYKSYNE RTNQNLKHLN EDVIDFDLLE DLICYIDENC PPGAILVFLP GVAEIDLLID
0901: RLSASVRFGG ASSDWILPLH SLLGPSDQRK VFQSPPDNFR KVIIATDIAE TSITIDDVIY VVDTGKHKEN RYNPRKKMSS IVEDWISRAN AKQRRGRAGR
1001: VKPGLCFCLY TRHRFENIMR PFQVPEMLRM PLTELCLQIK SLHLGDIKSF LLKAVEPPNE EAISSAVDLL YKVGAFEGHE ELSPLGYHLA KLPVDVLIGK
1101: MMLYGAIFGC LSPVLSVAAF LSYKSPFLSP KDEKQNVEKA KATLLNENLD GSTSVTDNKQ SDHLLMVIAY DKWSRILLQN GAKSARQFCH SFYLNNTVMH
1201: MIRDMRLQFG TLLADIGLID LPKDSLRPKE GSRKNNLESW FSNMSLPFNT YARCTSVIKS VMCAGLYPNV AASLEGVDPG ALGGRKPSDV LFSKDRPRWY
1301: DGRREVHIHP SSVNHSLKAV QYPFLVFLEK VETTKVFLRD TSVVSPYSLL LFGGSMVIQH QTGVVVIDGW LRLSAAAQTA VLFKQLRITL DAVLKELTRK
1401: PEMATFVDNE VVRSIIHLLL EEDKAR
0101: LSAIPDSATF ESALDWLCFN LPGDELPLKF SSAGTSTTSL AGAEGSVKVL STAKDNWVPQ SREPEEVKVS TEGLEVRIGG RKDENVSLDD GRSSQAAWIR
0201: QYMEQQEEED DANSNDSSTW EDHCLQSFEV VEAKPSRRKS KAAKKNSKHG SSKEQISHSS NSVSSNSETA NVEGVQNDLE ASEKRSESLG NIDEGSDLKK
0301: AIPKDIDKTC TNEVDEEVVE LDNMFFEDSS AWEAVAPEIL KQQQIEKLSL DGYGHLLGNI DDIWKKGDSG KMPKAVLQKF CQKLGWEAPK YNKISERDGK
0401: FVYSVNVLRG ATGRGKSWKA GGLTKIQLPE LDEEYGSVQE AQSRVAAFAL YQFFADLPLR QLLTEPYSSL ILRWQEGELS STSRVLDTED SRRSGFVDML
0501: LNIDADTIPS SEIENSSADG ISMDSGNTEG SKSLNEKRQT SMKSSMADHA ESAILKKQLE DKRKLPNYLK MLEARASLPI ARQKQHFLQL LKENDVVVVS
0601: GETGCGKTTQ VPQFILDDMI ESELGGSCNI VCTQPRRIAA ISVAERVSDE RCESSPGSND SLVGYQVRLD SARNERTKLL FCTTGILLRK LSGNRDLSDV
0701: THVVVDEVHE RTILSDFLLI VLKNLVEKRS NQQGRKLKVI LMSATVDSSL FARYFGECPV ISVEGRTHPV STHFLEDVYE KMEYCLALDS PASGAYFAQH
0801: GEKWKHASSS VNNRRGKKNL VLSSWGDESM LSEGYINPHY ISDYYKSYNE RTNQNLKHLN EDVIDFDLLE DLICYIDENC PPGAILVFLP GVAEIDLLID
0901: RLSASVRFGG ASSDWILPLH SLLGPSDQRK VFQSPPDNFR KVIIATDIAE TSITIDDVIY VVDTGKHKEN RYNPRKKMSS IVEDWISRAN AKQRRGRAGR
1001: VKPGLCFCLY TRHRFENIMR PFQVPEMLRM PLTELCLQIK SLHLGDIKSF LLKAVEPPNE EAISSAVDLL YKVGAFEGHE ELSPLGYHLA KLPVDVLIGK
1101: MMLYGAIFGC LSPVLSVAAF LSYKSPFLSP KDEKQNVEKA KATLLNENLD GSTSVTDNKQ SDHLLMVIAY DKWSRILLQN GAKSARQFCH SFYLNNTVMH
1201: MIRDMRLQFG TLLADIGLID LPKDSLRPKE GSRKNNLESW FSNMSLPFNT YARCTSVIKS VMCAGLYPNV AASLEGVDPG ALGGRKPSDV LFSKDRPRWY
1301: DGRREVHIHP SSVNHSLKAV QYPFLVFLEK VETTKVFLRD TSVVSPYSLL LFGGSMVIQH QTGVVVIDGW LRLSAAAQTA VLFKQLRITL DAVLKELTRK
1401: PEMATFVDNE VVRSIIHLLL EEDKAR
0001: MAPKKKPQKQ SNKAASSSSS SKSNYQKPSS GPKLQISAEN EDRLRRLLLN SGRSGPSIPA PISNSLSKAQ KTKKLNNVYE KLSCEGFVDD QIELALSSLR
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
Arabidopsis Description
DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I9Q5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.