Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d017967_P003 | Maize | nucleus | 92.95 | 92.73 |
| Os02t0736600-01 | Rice | nucleus | 77.04 | 77.28 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 76.33 | 75.74 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 75.39 | 74.75 |
| TraesCS6A01G178200.1 | Wheat | nucleus | 71.63 | 74.37 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 74.45 | 71.64 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 73.9 | 71.49 |
| TraesCS6A01G299400.2 | Wheat | nucleus | 74.29 | 71.49 |
| GSMUA_Achr3P08220_001 | Banana | nucleus | 51.57 | 61.21 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 52.82 | 51.02 |
| Solyc01g095710.2.1 | Tomato | nucleus | 51.88 | 49.37 |
| AT1G33390.2 | Thale cress | nucleus | 47.73 | 49.23 |
| PGSC0003DMT400000297 | Potato | nucleus | 51.1 | 48.8 |
| CDY48353 | Canola | nucleus | 45.85 | 47.83 |
| KRH76262 | Soybean | nucleus | 49.29 | 47.62 |
| CDY34159 | Canola | nucleus | 46.16 | 47.62 |
| KRH65271 | Soybean | nucleus | 49.06 | 47.35 |
| Bra032998.1-P | Field mustard | nucleus | 45.77 | 47.21 |
| KXG39505 | Sorghum | cytosol | 18.89 | 33.38 |
| EER87951 | Sorghum | nucleus, plastid | 17.87 | 32.34 |
| OQU86123 | Sorghum | nucleus | 17.71 | 32.29 |
| KXG22666 | Sorghum | nucleus | 17.71 | 32.06 |
| EES02741 | Sorghum | nucleus | 21.55 | 26.29 |
| KXG30390 | Sorghum | nucleus | 21.47 | 26.2 |
| OQU77934 | Sorghum | nucleus | 21.0 | 25.14 |
| EES15324 | Sorghum | nucleus | 20.69 | 24.65 |
| EER95349 | Sorghum | nucleus | 21.39 | 21.98 |
| KXG38358 | Sorghum | nucleus | 16.93 | 20.85 |
| KXG36287 | Sorghum | nucleus | 20.92 | 20.78 |
| KXG37551 | Sorghum | nucleus, vacuole | 17.71 | 19.62 |
| KXG32067 | Sorghum | mitochondrion | 17.87 | 18.37 |
| EES01523 | Sorghum | nucleus | 15.6 | 16.65 |
| KXG26332 | Sorghum | nucleus, plastid | 17.24 | 15.43 |
| OQU90279 | Sorghum | nucleus | 16.77 | 14.11 |
| Os02t0736800-01 | Rice | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A194YSJ9 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd |
| InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | EnsemblPlants:KXG30805 | ProteinID:KXG30805 | ProteinID:KXG30805.1 |
| InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF99 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | EnsemblPlantsGene:SORBI_3004G246000 | SUPFAM:SSF52540 | UniParc:UPI0007F2CCB4 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr4:-:59385192..59391664
Molecular Weight (calculated)
143432.0 Da
IEP (calculated)
7.946
GRAVY (calculated)
-0.501
Length
1276 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEDSNALILP CKRKNKAQGK AKDGKKAKKE DPKMSKTKLK KLQKLEEEKK KKLLQAKSIE VLQKHKISED AHSLLHASGT IGQAETLKEK RRRAVQFSKA
0101: GLDIPEELSL FKKNGDTKVP ENSDVVEQVS PSKFVEPAPI LDSGRECSNG MKKGPVKAIE CQPVMDFGAG IPEPKTEEPS DDAHMLTNQK IQLSTPSCSG
0201: AELDLQGKEL GQGEHAVQEC INPPIVVPVS RPHEVEKARR DLPIIMMEQE IMEAIYENSV VILCGETGCG KTTQVPQFLY EAGFGTSDRA DRKGMIGITQ
0301: PRRVAVLATA RRVSYELGLK LGREVGFQVR HDRKVGSECS IKFMTDGILL REIQGDFLLK RYSVIILDEA HERSLNTDIL IGMLSRIIKI RKDLYAKQQE
0401: KIRSGFKIKP EDKISQLKVV LMSATLQLKD FISNRRLFDV IPPAVKVPVR QFPVTVHFSK RTHDDYLGLA YKKVMSIHKR LPPGGILVFV TGQREVDYLC
0501: KKLRRASKVQ TAKNPEKTDG EDNGPCPEVD EKEIFEAYDI DRNESEHRYD MFSSYDDDGM NAEPNIDSSD NETESEMDSE TDDEESVTIE TTEEDVPVLA
0601: FLKDAESSSA LKASFGALSG IPSVLESAEE SSDAKGEEKT SPSVSCFSKC TEHQPVSHGR LRVLPLYAML PASQQLQVFQ DTPEGERLVV VATNVAETSL
0701: TIPGIKYVID TGKEKVKNYD HATGMSSYEV QWISKASASQ RAGRAGRTGP GHCYRLYSAA AYGKDDLFPE FAEPEIKKIP VEGVVLMLKF MSIDKVENFP
0801: FPTPPNKESL VEADRCLKTL EALYSDGKLT PMGKAMAQYP MSPRHSRLLL TVIKNLKSQQ QGFARSNFIL GYAAAAASAL SFTNPFLKQL DECDTNGESE
0901: ENTNPEANGP CERKRQKKLK AVVREAREKF SNPSSDALTI ARALQFFELS ENPMEFCRAN SLHLKTMEEM SKLRKQLLRL IFHHSKFCEE FAWNSGDSDD
1001: VEQAWRNEHS KKVLQLNEEE LLGQGICAGW ADRVARRIRT YSKLSEADRK VRAVRYQSCA LDDTIYLHRS SSVAQVAPEL VVYSELLNTK RLYMHGVTTV
1101: KPGWLLKYAS SLCTFSAPLE DPKPYYDPLN DQVYCYVSPI FSRHNWQLPL HSLPIKDNTS RLQVFACALL KGDVLPCLRD VKDFLALSPC VVLGPARQRR
1201: VGDLLNRMKI GPKLVDSRAA LRDVWNADPG FLYPEVKVWY QDKFHSQFDL IWEQMHQQVH LEGHKLFPKR SKKVKG
0101: GLDIPEELSL FKKNGDTKVP ENSDVVEQVS PSKFVEPAPI LDSGRECSNG MKKGPVKAIE CQPVMDFGAG IPEPKTEEPS DDAHMLTNQK IQLSTPSCSG
0201: AELDLQGKEL GQGEHAVQEC INPPIVVPVS RPHEVEKARR DLPIIMMEQE IMEAIYENSV VILCGETGCG KTTQVPQFLY EAGFGTSDRA DRKGMIGITQ
0301: PRRVAVLATA RRVSYELGLK LGREVGFQVR HDRKVGSECS IKFMTDGILL REIQGDFLLK RYSVIILDEA HERSLNTDIL IGMLSRIIKI RKDLYAKQQE
0401: KIRSGFKIKP EDKISQLKVV LMSATLQLKD FISNRRLFDV IPPAVKVPVR QFPVTVHFSK RTHDDYLGLA YKKVMSIHKR LPPGGILVFV TGQREVDYLC
0501: KKLRRASKVQ TAKNPEKTDG EDNGPCPEVD EKEIFEAYDI DRNESEHRYD MFSSYDDDGM NAEPNIDSSD NETESEMDSE TDDEESVTIE TTEEDVPVLA
0601: FLKDAESSSA LKASFGALSG IPSVLESAEE SSDAKGEEKT SPSVSCFSKC TEHQPVSHGR LRVLPLYAML PASQQLQVFQ DTPEGERLVV VATNVAETSL
0701: TIPGIKYVID TGKEKVKNYD HATGMSSYEV QWISKASASQ RAGRAGRTGP GHCYRLYSAA AYGKDDLFPE FAEPEIKKIP VEGVVLMLKF MSIDKVENFP
0801: FPTPPNKESL VEADRCLKTL EALYSDGKLT PMGKAMAQYP MSPRHSRLLL TVIKNLKSQQ QGFARSNFIL GYAAAAASAL SFTNPFLKQL DECDTNGESE
0901: ENTNPEANGP CERKRQKKLK AVVREAREKF SNPSSDALTI ARALQFFELS ENPMEFCRAN SLHLKTMEEM SKLRKQLLRL IFHHSKFCEE FAWNSGDSDD
1001: VEQAWRNEHS KKVLQLNEEE LLGQGICAGW ADRVARRIRT YSKLSEADRK VRAVRYQSCA LDDTIYLHRS SSVAQVAPEL VVYSELLNTK RLYMHGVTTV
1101: KPGWLLKYAS SLCTFSAPLE DPKPYYDPLN DQVYCYVSPI FSRHNWQLPL HSLPIKDNTS RLQVFACALL KGDVLPCLRD VKDFLALSPC VVLGPARQRR
1201: VGDLLNRMKI GPKLVDSRAA LRDVWNADPG FLYPEVKVWY QDKFHSQFDL IWEQMHQQVH LEGHKLFPKR SKKVKG
0001: MASVVGDDCN LDVMPPRKKK NKGSNKMQDK LNSNNNTGSK KSRKRKLNSN VNTVACKSQK RKLKKLEEDK EKEILFSKTA ELLDKYKISE DVSSLLQSSK
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
Arabidopsis Description
FAS4FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.