Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76262 | Soybean | nucleus | 94.93 | 95.0 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 61.27 | 61.32 |
| PGSC0003DMT400000297 | Potato | nucleus | 55.14 | 54.57 |
| Solyc01g095710.2.1 | Tomato | nucleus | 55.07 | 54.29 |
| GSMUA_Achr3P08220_001 | Banana | nucleus | 43.95 | 54.05 |
| AT1G33390.2 | Thale cress | nucleus | 49.47 | 52.87 |
| CDY48353 | Canola | nucleus | 46.9 | 50.7 |
| CDY34159 | Canola | nucleus | 47.13 | 50.36 |
| Os02t0736600-01 | Rice | nucleus | 48.34 | 50.24 |
| Bra032998.1-P | Field mustard | nucleus | 46.75 | 49.96 |
| KXG30805 | Sorghum | nucleus | 47.35 | 49.06 |
| Zm00001d017967_P003 | Maize | nucleus | 46.97 | 48.55 |
| TraesCS6B01G206600.1 | Wheat | nucleus | 47.2 | 48.52 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 47.2 | 48.48 |
| TraesCS6A01G178200.1 | Wheat | nucleus | 44.48 | 47.84 |
| TraesCS6B01G329000.1 | Wheat | nucleus | 46.82 | 46.93 |
| TraesCS6A01G299400.2 | Wheat | nucleus | 46.97 | 46.83 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 46.9 | 46.76 |
| KRH69191 | Soybean | nucleus | 19.06 | 34.9 |
| KRH68290 | Soybean | nucleus | 18.91 | 34.72 |
| KRG96553 | Soybean | nucleus | 18.84 | 34.54 |
| KRH58751 | Soybean | nucleus | 17.78 | 33.72 |
| KRH31768 | Soybean | cytosol, nucleus | 14.45 | 33.1 |
| KRH21325 | Soybean | nucleus | 16.26 | 32.28 |
| KRH75071 | Soybean | nucleus | 17.17 | 32.2 |
| KRH70930 | Soybean | nucleus | 17.1 | 32.06 |
| KRH12910 | Soybean | cytosol, nucleus | 16.49 | 29.26 |
| KRG97372 | Soybean | nucleus | 20.2 | 27.61 |
| KRH69386 | Soybean | cytosol | 5.3 | 26.62 |
| KRH54662 | Soybean | nucleus | 21.03 | 26.58 |
| KRH40933 | Soybean | cytosol | 12.18 | 26.44 |
| KRH74752 | Soybean | nucleus | 20.42 | 26.16 |
| KRH72171 | Soybean | nucleus | 15.96 | 23.44 |
| KRH05918 | Soybean | nucleus | 20.8 | 22.97 |
| KRH17401 | Soybean | nucleus | 20.8 | 22.86 |
| KRH23170 | Soybean | nucleus | 21.03 | 21.87 |
| KRH10165 | Soybean | nucleus | 20.88 | 21.7 |
| KRH13104 | Soybean | mitochondrion | 6.88 | 21.26 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 16.11 | 20.68 |
| KRH38164 | Soybean | nucleus | 16.79 | 20.15 |
| KRG90929 | Soybean | plastid | 16.41 | 19.05 |
| KRH44757 | Soybean | plastid | 16.64 | 18.95 |
| KRH41772 | Soybean | plastid | 16.57 | 18.61 |
| KRH60477 | Soybean | plastid | 16.41 | 18.39 |
| KRH14525 | Soybean | nucleus | 15.36 | 17.44 |
| KRH73592 | Soybean | nucleus | 15.28 | 17.38 |
| KRH01863 | Soybean | nucleus | 15.88 | 14.6 |
| KRG97543 | Soybean | nucleus, plastid | 17.55 | 13.42 |
| KRH31333 | Soybean | nucleus, plastid | 17.55 | 13.36 |
| Os02t0736800-01 | Rice | mitochondrion | 0.08 | 1.04 |
Protein Annotations
| Gene3D:1.20.120.1080 | EntrezGene:100782767 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | EMBL:ACUP02001322 |
| ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DNA/RNA_helicase_DEAH_CS | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_03G024000 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | UniProt:K7KCE6 |
| ProteinID:KRH65270.1 | EnsemblPlants:KRH65271 | ProteinID:KRH65271 | ProteinID:KRH65271.1 | ProteinID:KRH65272.1 | InterPro:P-loop_NTPase |
| PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | ScanProsite:PS00690 | PFscan:PS51192 |
| PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF99 | SMART:SM00382 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI0002965E82 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr3:-:2544758..2552795
Molecular Weight (calculated)
149488.0 Da
IEP (calculated)
6.812
GRAVY (calculated)
-0.524
Length
1322 amino acids
Sequence
(BLAST)
(BLAST)
0001: METWESSGDQ IEFNSQSLGD GDSNALILPA KRMRKRKGKE QENGKVKSNK KQKLSKPQKR KMKKLEDDKE KQLLLEKAIK TLNENTLPEY AYPLLLSSCN
0101: INRDETMKEK RRRAVHLLKE GLEVSYDGLS MKPETDEIHL EQVDEVVEND IQIQPISPEE VLNTTSVSLE SSQEPVHGNE VETYKYVSEH PTDISIDNHL
0201: DEIRSSPMSC SIDEIKGTKS KYRTNENHNS NELSNLPGYS APRRSNVPTV VHVYRPTEVE DKRKDLPIVM MEQEIMEAIN DRSSVIICGE TGCGKTTQVP
0301: QFLYEAGYGS SKGIIGVTQP RRVAVLATAK RVAYELGLHL GKEVGFQVRY DKKIGESCSI KFMTDGILLR EVQNDILLRR YSVLILDEAH ERSLNTDILI
0401: GMLSRVIKTR QMIYNEQQKM ILSGENISPE KMVFPLKLVL MSATLRVQDF TSGKLFHTPP PVIEVPTRQF PVTAYFSKKT EKTDYIGEAY KKVLAIHKRL
0501: PPGGILVFLT GQREVEDLCR KLRKASREFI KKKVEGSLET DSTVVHETNS VEGVNINEIN EAFEVHGSSS IQQTDRFSCY DEDEDNVNWN ESDFSYDSET
0601: DSELEFDEDD DNLELSENKS NIVDVLGQAG SLASLKAAFE KLSGQATLSS SNEEEASVNI EGNLDQSKVF REKRAKENCS TPGALCVLPL YAMLPAAAQL
0701: RVFEEVKDGE RLVVVATNVA ETSLTIPGIK YVVDTGREKV KNYDPSNGME TYEVQWISKA SAAQRAGRSG RTGPGHCYRL YSSAAFSNEF PEHSPAEVEK
0801: VPVHGVVLLL KSMHIKKVAN FPFPTSLKDS SLLEAETCLK ALEALDNKDE LTLLGKAMAH YPLSPRHSRM LLTVIKNTRH VHKFNPNMLL AYAVAAAAAL
0901: SLSNPFVMQY EDDSSRDSEM SEKSSLGDGD KGIGKKEKSR KKKLKETAKV AREKFRVVTS DALTIAYALQ CFEHSQKSAE FCDDYALHFK TMDEMSKLRQ
1001: QLLKLVFYQS DKGGFEEECS WTCGSLEDVE RVWQASSEKY PLSLVEERLI CQAICAGWAD RVAKRITASS RASDGENTSR ALKYQSSMVD ESVFLHRWSS
1101: ASIVGPEFLV YNELLETKRP NKEGITSAKR AYMHGVTSVE PAWLVEHAKS SCIFSPPLMD PRPYYDAQTD QVKCWVIPTF GRFCWELPKH SLSISNDEHR
1201: VQVFAYALLE GQVCPCLKSV RKYMSAAPES IMKREALGQK RVGNLLSKLK SRLIDSSAML RMVWKENPRE LFSEILDWFQ QSFHKHFEEL WLQMVNELLM
1301: EKQERPLHKS SKKKKVKSKS LR
0101: INRDETMKEK RRRAVHLLKE GLEVSYDGLS MKPETDEIHL EQVDEVVEND IQIQPISPEE VLNTTSVSLE SSQEPVHGNE VETYKYVSEH PTDISIDNHL
0201: DEIRSSPMSC SIDEIKGTKS KYRTNENHNS NELSNLPGYS APRRSNVPTV VHVYRPTEVE DKRKDLPIVM MEQEIMEAIN DRSSVIICGE TGCGKTTQVP
0301: QFLYEAGYGS SKGIIGVTQP RRVAVLATAK RVAYELGLHL GKEVGFQVRY DKKIGESCSI KFMTDGILLR EVQNDILLRR YSVLILDEAH ERSLNTDILI
0401: GMLSRVIKTR QMIYNEQQKM ILSGENISPE KMVFPLKLVL MSATLRVQDF TSGKLFHTPP PVIEVPTRQF PVTAYFSKKT EKTDYIGEAY KKVLAIHKRL
0501: PPGGILVFLT GQREVEDLCR KLRKASREFI KKKVEGSLET DSTVVHETNS VEGVNINEIN EAFEVHGSSS IQQTDRFSCY DEDEDNVNWN ESDFSYDSET
0601: DSELEFDEDD DNLELSENKS NIVDVLGQAG SLASLKAAFE KLSGQATLSS SNEEEASVNI EGNLDQSKVF REKRAKENCS TPGALCVLPL YAMLPAAAQL
0701: RVFEEVKDGE RLVVVATNVA ETSLTIPGIK YVVDTGREKV KNYDPSNGME TYEVQWISKA SAAQRAGRSG RTGPGHCYRL YSSAAFSNEF PEHSPAEVEK
0801: VPVHGVVLLL KSMHIKKVAN FPFPTSLKDS SLLEAETCLK ALEALDNKDE LTLLGKAMAH YPLSPRHSRM LLTVIKNTRH VHKFNPNMLL AYAVAAAAAL
0901: SLSNPFVMQY EDDSSRDSEM SEKSSLGDGD KGIGKKEKSR KKKLKETAKV AREKFRVVTS DALTIAYALQ CFEHSQKSAE FCDDYALHFK TMDEMSKLRQ
1001: QLLKLVFYQS DKGGFEEECS WTCGSLEDVE RVWQASSEKY PLSLVEERLI CQAICAGWAD RVAKRITASS RASDGENTSR ALKYQSSMVD ESVFLHRWSS
1101: ASIVGPEFLV YNELLETKRP NKEGITSAKR AYMHGVTSVE PAWLVEHAKS SCIFSPPLMD PRPYYDAQTD QVKCWVIPTF GRFCWELPKH SLSISNDEHR
1201: VQVFAYALLE GQVCPCLKSV RKYMSAAPES IMKREALGQK RVGNLLSKLK SRLIDSSAML RMVWKENPRE LFSEILDWFQ QSFHKHFEEL WLQMVNELLM
1301: EKQERPLHKS SKKKKVKSKS LR
0001: MASVVGDDCN LDVMPPRKKK NKGSNKMQDK LNSNNNTGSK KSRKRKLNSN VNTVACKSQK RKLKKLEEDK EKEILFSKTA ELLDKYKISE DVSSLLQSSK
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
0101: VIGRSATKLE KRRRAMQLSK AGVETEHSDE SVEQNDNDDD SCMDEPTTPE HVEIETPTFV TDSEQQLVHA DLMISAEESS SKLEVDDTVD MIPLTTCRDD
0201: DEDSMDGLIE NEDVTVQGPR VPAFVVHVSR PAEVEETRKD LPIVMMEQEI MEAINRHPAV IISGQTGCGK TTQVPQFLYE AGFGSKQFSS RSGIIGITQP
0301: RRVAVLATAK RVAFELGVRL GKEVGFQVRY DKKIGENSSI KFMTDGILLR EIQNDFLLRR YSVIILDEAH ERSLNTDILI GMLTRVIKIR QEYYEEQQKS
0401: LQSGGTVTSE CQITPLKLIL MSATLRVEDF VSGKRLFPNI PPLIEVPTRQ YPVTIHFSKK TEIVDYIGEA YKKVMSIHKK LPQGGILVFV TGQREVDYLC
0501: EKLRKSSKEL VVQAAKRDAY VKKKCDDGSF GGVDMKEIAE AFDDDSNNQN SRFSSHGEDP SDIGDGNYDD DFEEEDMYES DEDRDWETVD DGFASSFVEE
0601: GKLDALRAAF NALADKNGSV SAEPAKSIAA ENQEAEQVKN KFSPGKLRVL PLYAMLSPAA QLRVFEEVEK EERLVVVATN VAETSLTIPG IKYVVDTGRV
0701: KVKNYDSKTG MESYEVDWIS QASASQRAGR AGRTGPGHCY RLYSSAVFSN IFEESSLPEI MKVPVDGVIL LMKSMNIPKV ENFPFPTPPE PSAIREAERC
0801: LKALEALDSN GGLTPLGKAM SHYPMSPRHS RMLLTVIQML KETRNYSRAN LILGYAVAAV AALSLPNPLI MEFEGEKKNE SKDADKTVKQ EDKQRKKDRK
0901: EKIKAARDRF SNPSSDALTV AYALHSFEVS ENGMGFCEAN GLHLKTMDEM SKLKDQLLRL VFNCCKPSET EDSFSWTHGT IQDVEKSWRI TTSTSSKTPL
1001: LQNEEELLGE AICAGWADRV ARKTRATEYQ ACAVQEPVFL HRWSSLINSA PELLVYSELL LTNRPYMHGA TRVRPEWLVK HAKSLCVFSA PLKDPKPYYS
1101: SEEDRVLCWV VPSFGPHNWE LPAHSVAITE DRDRAAAFGC ALLQGEVLTC LKSFRALLAG KPETLLEREA WGLERVGSLV MVLTEKKIDT LESLRKNWEQ
1201: NPNVLYSEIE VWFQKKFRHR VKDLWQTMLK EAHVRRS
Arabidopsis Description
FAS4FAS4 [Source:UniProtKB/TrEMBL;Acc:A0A178WIP4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.