Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23170 | Soybean | nucleus | 97.25 | 97.32 |
| VIT_01s0010g02920.t01 | Wine grape | nucleus | 62.74 | 91.2 |
| Solyc12g089010.1.1 | Tomato | nucleus | 51.57 | 80.99 |
| Solyc10g076910.1.1 | Tomato | nucleus | 77.83 | 77.04 |
| PGSC0003DMT400018531 | Potato | nucleus | 77.67 | 76.89 |
| TraesCS3D01G264900.1 | Wheat | plastid | 55.66 | 76.87 |
| AT5G13010.1 | Thale cress | nucleus | 75.63 | 76.65 |
| CDX85676 | Canola | nucleus | 74.92 | 76.36 |
| Bra023387.1-P | Field mustard | nucleus | 74.76 | 76.2 |
| CDX91151 | Canola | nucleus | 74.61 | 75.98 |
| CDY23802 | Canola | nucleus | 30.97 | 75.05 |
| PGSC0003DMT400039875 | Potato | nucleus | 54.32 | 74.86 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 73.58 | 74.11 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 73.43 | 73.95 |
| KXG36287 | Sorghum | nucleus | 74.61 | 73.85 |
| TraesCS2A01G233700.1 | Wheat | nucleus | 73.27 | 73.79 |
| Os07t0508000-01 | Rice | nucleus | 73.58 | 73.12 |
| Zm00001d006459_P003 | Maize | plastid | 72.33 | 68.35 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 73.43 | 66.57 |
| KRH21325 | Soybean | nucleus | 22.09 | 42.19 |
| KRH12910 | Soybean | cytosol, nucleus | 24.37 | 41.61 |
| KRH58751 | Soybean | nucleus | 22.72 | 41.46 |
| KRH69386 | Soybean | cytosol | 8.49 | 41.06 |
| KRH69191 | Soybean | nucleus | 23.27 | 41.0 |
| KRH68290 | Soybean | nucleus | 23.11 | 40.83 |
| KRG96553 | Soybean | nucleus | 23.11 | 40.78 |
| KRH31768 | Soybean | cytosol, nucleus | 18.08 | 39.86 |
| KRG97372 | Soybean | nucleus | 30.11 | 39.61 |
| KRH75071 | Soybean | nucleus | 21.93 | 39.57 |
| KRH70930 | Soybean | nucleus | 21.86 | 39.43 |
| KRH54662 | Soybean | nucleus | 30.97 | 37.67 |
| KRH40933 | Soybean | cytosol | 17.77 | 37.11 |
| KRH74752 | Soybean | nucleus | 29.25 | 36.05 |
| KRH05918 | Soybean | nucleus | 33.1 | 35.17 |
| KRH17401 | Soybean | nucleus | 33.25 | 35.16 |
| KRH72171 | Soybean | nucleus | 18.79 | 26.56 |
| KRH13104 | Soybean | mitochondrion | 8.57 | 25.47 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 19.42 | 23.98 |
| KRH44757 | Soybean | plastid | 20.28 | 22.22 |
| KRH38164 | Soybean | nucleus | 19.1 | 22.05 |
| KRH41772 | Soybean | plastid | 19.73 | 21.33 |
| KRH60477 | Soybean | plastid | 19.73 | 21.27 |
| KRG90929 | Soybean | plastid | 18.79 | 20.98 |
| KRH65271 | Soybean | nucleus | 21.7 | 20.88 |
| KRH76262 | Soybean | nucleus | 21.62 | 20.82 |
| KRH73592 | Soybean | nucleus | 16.27 | 17.81 |
| KRH14525 | Soybean | nucleus | 16.12 | 17.61 |
| KRH01863 | Soybean | nucleus | 18.32 | 16.2 |
| KRG97543 | Soybean | nucleus, plastid | 19.81 | 14.57 |
| KRH31333 | Soybean | nucleus, plastid | 19.65 | 14.4 |
Protein Annotations
| Gene3D:1.20.120.1080 | EntrezGene:100817761 | MapMan:16.4.7.1.6 | Gene3D:3.40.50.300 | EMBL:ACUP02009121 | ncoils:Coil |
| InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_15G031900 | GO:GO:0000166 | GO:GO:0000398 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005681 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 |
| InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | UniProt:I1MD84 | InterPro:IPR001650 | InterPro:IPR014001 |
| EnsemblPlants:KRH10165 | ProteinID:KRH10165 | ProteinID:KRH10165.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF91 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | UniParc:UPI000233B030 | SEG:seg |
Description
hypothetical protein
Coordinates
chr15:-:2566122..2575032
Molecular Weight (calculated)
143529.0 Da
IEP (calculated)
6.522
GRAVY (calculated)
-0.652
Length
1272 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEKDGAGAGA GVVDIDKITA TLEPEKPTSG GLYVPGKDRM VYVPQERKSR LGLDALASAK RSQHDAGFKV PKERTISIAA SAEDEDKSEL SVSEESGHDG
0101: IVNRRRHTNR RYRDTTNETS HSESSVTEDH YGDTNRTPSS EHKGSDVPAS PSGYDREDHR SERRHHRDDS RSGNGRVRHW DYYESKGSYS ERDSHSRYDR
0201: EYGRKRNRYE GSRRMPGRSD WDDGQWEWGD TPRRDSVSSS RRHQPSPSPM FVGASPDARL VSPWLGGHTP HSSFTSPSPW DHVSPSPVPI RASGSSAKSS
0301: VSRHNGRSHQ LSFSSETSNR YEDEMADKSD LGEEHKYDIT ESMRLEMEYD ADRAWYDREE GSTFDGDNSS FFLGDEASFQ KKETELAKRL VRRDGTKMSL
0401: SQSKKLSQLT ADNAQWEDRQ LLRSGAVRGT EVQTEFDDEE EHKVILLVHD TKPPFLDGRV VFTKQAEPIM PLKDPTSDMA IISRKGSTLV REIHEKQSMN
0501: KSRQRFWELA GSKLGDILGV EKTAEQIDAD TAEVGEDGEI DFKEEAKFSQ HMKKGEAVSD FAKSKTIAEQ RQYLPIFSVR EELLQVVREN QVVVVVGETG
0601: SGKTTQLTQY LHEDGYTIGG IVGCTQPRRV AAMSVAKRVS EEMDTELGDK IGYAIRFEDV TGPNTIIKYM TDGVLLRETL KDSDLDKYRV IVMDEAHERS
0701: LSTDVLFGIL KKVVAQRRDF KLIVTSATLN AQKFSNFFGS VPIFHIPGRT FPVNILWSKS PVEDYVEGAV KQAMTIHITS PAGDILIFMT GQDEIEAACY
0801: ALAERMEQMV SSSKKAVPKL LILPIYSQLP ADLQAKIFQK AEDGARKCIV ATNIAETSLT VDGIFYVIDS GYGKMKVYNP RMGMDALQVF PVSRAAADQR
0901: AGRAGRTGPG TCYRLYTESA YLNEMLPSPV PEIQRTNLGN VVLLLKSLKV ENLLDFDFMD PPPQDNILNS MYQLWVLGAL NNVGGLTDLG WKMVEFPLDP
1001: PLAKMLLMGE QLGCLEEVLT IVSMLSVPSV FFRPKDRAEE SDAARERFFV PESDHLTLYN VYQQWKQHDY RGDWCNDHFL HVKGLRKARE VRSQLLDILK
1101: TLKIPLTSCW PDTDIVRKAI CSAYFHNSAR LKGVGEYVNC RNGMPCHLHP SSALYGMGCT PEYVVYHELI LTTKEYMQCA TAVEPQWLAE LGPMFFSVKD
1201: SDTSLLEHKK RQKQEKTAME EEMENLKKVQ AEVEKERKQK EKEKMAKHQQ QISMPGLRKG SSTFLRPKKF GL
0101: IVNRRRHTNR RYRDTTNETS HSESSVTEDH YGDTNRTPSS EHKGSDVPAS PSGYDREDHR SERRHHRDDS RSGNGRVRHW DYYESKGSYS ERDSHSRYDR
0201: EYGRKRNRYE GSRRMPGRSD WDDGQWEWGD TPRRDSVSSS RRHQPSPSPM FVGASPDARL VSPWLGGHTP HSSFTSPSPW DHVSPSPVPI RASGSSAKSS
0301: VSRHNGRSHQ LSFSSETSNR YEDEMADKSD LGEEHKYDIT ESMRLEMEYD ADRAWYDREE GSTFDGDNSS FFLGDEASFQ KKETELAKRL VRRDGTKMSL
0401: SQSKKLSQLT ADNAQWEDRQ LLRSGAVRGT EVQTEFDDEE EHKVILLVHD TKPPFLDGRV VFTKQAEPIM PLKDPTSDMA IISRKGSTLV REIHEKQSMN
0501: KSRQRFWELA GSKLGDILGV EKTAEQIDAD TAEVGEDGEI DFKEEAKFSQ HMKKGEAVSD FAKSKTIAEQ RQYLPIFSVR EELLQVVREN QVVVVVGETG
0601: SGKTTQLTQY LHEDGYTIGG IVGCTQPRRV AAMSVAKRVS EEMDTELGDK IGYAIRFEDV TGPNTIIKYM TDGVLLRETL KDSDLDKYRV IVMDEAHERS
0701: LSTDVLFGIL KKVVAQRRDF KLIVTSATLN AQKFSNFFGS VPIFHIPGRT FPVNILWSKS PVEDYVEGAV KQAMTIHITS PAGDILIFMT GQDEIEAACY
0801: ALAERMEQMV SSSKKAVPKL LILPIYSQLP ADLQAKIFQK AEDGARKCIV ATNIAETSLT VDGIFYVIDS GYGKMKVYNP RMGMDALQVF PVSRAAADQR
0901: AGRAGRTGPG TCYRLYTESA YLNEMLPSPV PEIQRTNLGN VVLLLKSLKV ENLLDFDFMD PPPQDNILNS MYQLWVLGAL NNVGGLTDLG WKMVEFPLDP
1001: PLAKMLLMGE QLGCLEEVLT IVSMLSVPSV FFRPKDRAEE SDAARERFFV PESDHLTLYN VYQQWKQHDY RGDWCNDHFL HVKGLRKARE VRSQLLDILK
1101: TLKIPLTSCW PDTDIVRKAI CSAYFHNSAR LKGVGEYVNC RNGMPCHLHP SSALYGMGCT PEYVVYHELI LTTKEYMQCA TAVEPQWLAE LGPMFFSVKD
1201: SDTSLLEHKK RQKQEKTAME EEMENLKKVQ AEVEKERKQK EKEKMAKHQQ QISMPGLRKG SSTFLRPKKF GL
0001: MGVDPFKTTE TLEADKETNG GVPVKDKLTF KAPERKSRLG LDARAIEKKD NAKTEGEFKV PKKSAISVTS SLDEEDKSDV SGLDFGTENT RPVHSSRRYR
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
Arabidopsis Description
CUVPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Source:UniProtKB/Swiss-Prot;Acc:F4K2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.