Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g089010.1.1 | Tomato | nucleus | 73.49 | 79.38 |
| TraesCS3D01G264900.1 | Wheat | plastid | 80.8 | 76.76 |
| CDY23802 | Canola | nucleus | 45.37 | 75.62 |
| PGSC0003DMT400039875 | Potato | nucleus | 76.8 | 72.81 |
| KRH23170 | Soybean | nucleus | 91.54 | 63.02 |
| KRH10165 | Soybean | nucleus | 91.2 | 62.74 |
| CDX85676 | Canola | nucleus | 88.8 | 62.26 |
| CDX91151 | Canola | nucleus | 88.8 | 62.21 |
| Bra023387.1-P | Field mustard | nucleus | 88.69 | 62.18 |
| AT5G13010.1 | Thale cress | nucleus | 88.91 | 61.99 |
| PGSC0003DMT400018531 | Potato | nucleus | 90.74 | 61.79 |
| Solyc10g076910.1.1 | Tomato | nucleus | 90.74 | 61.79 |
| TraesCS2A01G233700.1 | Wheat | nucleus | 88.46 | 61.28 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 88.34 | 61.2 |
| TraesCS2B01G249700.1 | Wheat | nucleus | 88.23 | 61.12 |
| Os07t0508000-01 | Rice | nucleus | 89.03 | 60.86 |
| KXG36287 | Sorghum | nucleus | 89.26 | 60.78 |
| Zm00001d006459_P003 | Maize | plastid | 88.8 | 57.73 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 88.23 | 55.02 |
| VIT_07s0005g01770.t01 | Wine grape | nucleus | 33.37 | 40.11 |
| VIT_01s0137g00640.t01 | Wine grape | nucleus | 32.23 | 38.84 |
| VIT_10s0003g00810.t01 | Wine grape | nucleus | 30.74 | 38.76 |
| VIT_01s0010g02780.t01 | Wine grape | nucleus | 27.43 | 37.5 |
| VIT_08s0056g00470.t01 | Wine grape | nucleus | 44.69 | 33.28 |
| VIT_17s0000g06950.t01 | Wine grape | nucleus | 39.43 | 32.73 |
| VIT_17s0000g03030.t01 | Wine grape | nucleus | 27.66 | 22.89 |
| VIT_08s0032g01230.t01 | Wine grape | nucleus, plastid | 26.51 | 22.63 |
| VIT_07s0005g00860.t01 | Wine grape | nucleus | 30.06 | 19.91 |
| VIT_01s0011g04360.t01 | Wine grape | plastid | 26.74 | 19.81 |
| VIT_12s0028g01050.t01 | Wine grape | nucleus | 23.66 | 16.82 |
| VIT_12s0035g00800.t01 | Wine grape | nucleus | 24.0 | 15.34 |
| VIT_07s0191g00210.t01 | Wine grape | nucleus | 25.14 | 12.67 |
Protein Annotations
Description
No Description!
Coordinates
chr1:+:19975633..19994236
Molecular Weight (calculated)
98686.8 Da
IEP (calculated)
6.579
GRAVY (calculated)
-0.378
Length
875 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLAQSKKLS QLTADNAQWE DRQLLRSGAV RGTEVQTEFD DEEERKVILL VHDTKPPFLD GRVVFTKQAE PIMPLKDPTS DMAIISRKGS ALVREVHEKQ
101: SMNKSRQRFW ELAGSKLGDI LGVEKTAEQI DADTAVVGEE GEVDFKEDAK FAQHLKKDEA VSEFAKSKTL AEQRQYLPIY SVREELLQVI RENQVVVVVG
201: ETGSGKTTQL TQYLHEDGYT TNGIVGCTQP RRVAAMSVAK RVSEEMETEL GDKVGYAIRF EDVTGPNTKI KYMTDGVLMR ETLKDSELDK YRVVVMDEAH
301: ERSLNTDVLF GILKKVVAQR RDFKLIVTSA TLNAQKFSNF FGSVPIFHIP GRTFPVNILY SKTPCEDYVE GAVKQAMTVH ITSPPGDILI FMTGQDEIEA
401: TCYALAERME QLVSTTKKGV PKLSILPIYS QLPADLQAKI FQKAEDGARK CIVATNIAET SLTVDGIFYV IDTGYGKMKV YNPRMGMDAL QVFPVSRAAA
501: DQRAGRAGRT GPGTCYRLYT ESAYLNELLA SPVPEIQRTN LGNVVLLLKS LKIENLLDFD FMDPPPQDNI LNSMYQLWVL GALNNVGGLT ELGWKMVEFP
601: LDPPLAKMLL IGEQLECINE VLTIVSMLSV PSVFFRPKDR AEESDAAREK FFVPESDHLT LLNVYQQWKA NQYRGDWCND HFLHVKGLRK AREVRSQLLD
701: ILKTLKIPLT SCGPDWDVVR KAICSAYFHN AARLKGVGEY VNCRNGMPCH LHPSSALYGL GYTPDYVVYH ELILTAKEYM QCATAVEPQW LAELGPMFFS
801: VKDSDTSMLE HKKRQKEEKS AMEEEMENLR KEQEEAERKS KEKERKKRAK QQQQVSMPGL RQGSSTYLRP KKMGL
101: SMNKSRQRFW ELAGSKLGDI LGVEKTAEQI DADTAVVGEE GEVDFKEDAK FAQHLKKDEA VSEFAKSKTL AEQRQYLPIY SVREELLQVI RENQVVVVVG
201: ETGSGKTTQL TQYLHEDGYT TNGIVGCTQP RRVAAMSVAK RVSEEMETEL GDKVGYAIRF EDVTGPNTKI KYMTDGVLMR ETLKDSELDK YRVVVMDEAH
301: ERSLNTDVLF GILKKVVAQR RDFKLIVTSA TLNAQKFSNF FGSVPIFHIP GRTFPVNILY SKTPCEDYVE GAVKQAMTVH ITSPPGDILI FMTGQDEIEA
401: TCYALAERME QLVSTTKKGV PKLSILPIYS QLPADLQAKI FQKAEDGARK CIVATNIAET SLTVDGIFYV IDTGYGKMKV YNPRMGMDAL QVFPVSRAAA
501: DQRAGRAGRT GPGTCYRLYT ESAYLNELLA SPVPEIQRTN LGNVVLLLKS LKIENLLDFD FMDPPPQDNI LNSMYQLWVL GALNNVGGLT ELGWKMVEFP
601: LDPPLAKMLL IGEQLECINE VLTIVSMLSV PSVFFRPKDR AEESDAAREK FFVPESDHLT LLNVYQQWKA NQYRGDWCND HFLHVKGLRK AREVRSQLLD
701: ILKTLKIPLT SCGPDWDVVR KAICSAYFHN AARLKGVGEY VNCRNGMPCH LHPSSALYGL GYTPDYVVYH ELILTAKEYM QCATAVEPQW LAELGPMFFS
801: VKDSDTSMLE HKKRQKEEKS AMEEEMENLR KEQEEAERKS KEKERKKRAK QQQQVSMPGL RQGSSTYLRP KKMGL
0001: MGVDPFKTTE TLEADKETNG GVPVKDKLTF KAPERKSRLG LDARAIEKKD NAKTEGEFKV PKKSAISVTS SLDEEDKSDV SGLDFGTENT RPVHSSRRYR
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
0101: EKSSRSQSAQ ESTVTTENAG TSDISITPRT LSCTSSYERG GSNRHREEHR RDRSETPRSR QRNTYDEMDH YRRRESYRQS DRDYHGEKRR RYNSDWRTPG
0201: RSDWDDGQDE WERSPHGDRG SSYSRRPQPS PSPMLAAASP DARLASPWLD TPRSTMSSAS PWDMGAPSPI PIRASGSSIR SSSSRYGGRS NQLAYSREGD
0301: LTNEGHSDED RSQGAEEFKH EITETMRVEM EYQSDRAWYD TDEGNSLFDA DSASFFLGDD ASLQKKETEL AKRLVRRDGS KMSLAQSKKY SQLNADNAQW
0401: EDRQLLRSGA VRGTEVQTEF DSEEERKAIL LVHDTKPPFL DGRVVYTKQA EPVMPVKDPT SDMAIISRKG SGLVKEIREK QSANKSRQRF WELAGSNLGN
0501: ILGIEKSAEQ IDADTAVVGD DGEVDFKGEA KFAQHMKKGE AVSEFAMSKT MAEQRQYLPI FSVRDELLQV IRENQVIVVV GETGSGKTTQ LTQYLHEDGY
0601: TINGIVGCTQ PRRVAAMSVA KRVSEEMETE LGDKIGYAIR FEDVTGPNTV IKYMTDGVLL RETLKDSDLD KYRVVVMDEA HERSLNTDVL FGILKKVVAR
0701: RRDFKLIVTS ATLNAQKFSN FFGSVPIFNI PGRTFPVNIL YSKTPCEDYV EAAVKQAMTI HITSPPGDIL IFMTGQDEIE AACFSLKERM EQLVSSSSRE
0801: ITNLLILPIY SQLPADLQAK IFQKPEDGAR KCIVATNIAE TSLTVDGIYY VIDTGYGKMK VFNPRMGMDA LQVFPISRAA SDQRAGRAGR TGPGTCYRLY
0901: TESAYLNEML PSPVPEIQRT NLGNVVLLLK SLKIDNLLDF DFMDPPPQEN ILNSMYQLWV LGALNNVGGL TDLGWKMVEF PLDPPLAKML LMGERLDCID
1001: EVLTIVSMLS VPSVFFRPKE RAEESDAARE KFFVPESDHL TLLNVYQQWK EHDYRGDWCN DHYLQVKGLR KAREVRSQLL DILKQLKIEL RSCGPDWDIV
1101: RKAICSAYFH NSARLKGVGE YVNCRTGMPC HLHPSSALYG LGYTPDYVVY HELILTTKEY MQCATSVEPH WLAELGPMFF SVKDSDTSML EHKKKQKEEK
1201: SGMEEEMEKL RRDQVESELR SKERERKKRA KQQQQISGPG LKKGTTFLRP KKLGL
Arabidopsis Description
CUVPre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 [Source:UniProtKB/Swiss-Prot;Acc:F4K2E9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.