Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_12s0035g00800.t01 | Wine grape | nucleus | 65.02 | 68.3 |
| Solyc01g103690.2.1 | Tomato | nucleus | 63.77 | 63.77 |
| AT1G58060.1 | Thale cress | nucleus | 63.14 | 62.23 |
| CDY39917 | Canola | nucleus | 59.74 | 60.79 |
| CDY29164 | Canola | nucleus | 59.74 | 60.32 |
| Os04t0432200-00 | Rice | extracellular | 3.06 | 60.27 |
| Bra027890.1-P | Field mustard | nucleus | 53.96 | 58.35 |
| AT1G58050.1 | Thale cress | nucleus | 56.88 | 57.73 |
| GSMUA_Achr6P17860_001 | Banana | nucleus | 56.12 | 56.71 |
| KXG26332 | Sorghum | nucleus, plastid | 54.24 | 54.7 |
| Zm00001d003655_P006 | Maize | nucleus, plastid | 53.89 | 54.42 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 53.13 | 53.5 |
| TraesCS2A01G304100.1 | Wheat | nucleus, plastid | 53.13 | 53.46 |
| TraesCS2D01G302700.1 | Wheat | plastid | 52.71 | 53.04 |
| CDY63687 | Canola | nucleus, plastid | 38.87 | 50.36 |
| KRH72171 | Soybean | nucleus | 23.78 | 38.0 |
| KRH32860 | Soybean | mitochondrion, nucleus, plastid | 24.76 | 34.56 |
| KRH75071 | Soybean | nucleus | 15.51 | 31.63 |
| KRH70930 | Soybean | nucleus | 15.37 | 31.35 |
| KRH38164 | Soybean | nucleus | 23.99 | 31.31 |
| KRH41772 | Soybean | plastid | 25.1 | 30.67 |
| KRG90929 | Soybean | plastid | 24.2 | 30.55 |
| KRH60477 | Soybean | plastid | 24.97 | 30.42 |
| KRH69191 | Soybean | nucleus | 15.09 | 30.06 |
| KRH68290 | Soybean | nucleus | 15.02 | 30.0 |
| KRH31768 | Soybean | cytosol, nucleus | 12.03 | 29.98 |
| KRG96553 | Soybean | nucleus | 14.95 | 29.82 |
| KRH21325 | Soybean | nucleus | 13.77 | 29.73 |
| KRH44757 | Soybean | plastid | 23.44 | 29.03 |
| KRH58751 | Soybean | nucleus | 14.05 | 28.98 |
| KRH13104 | Soybean | mitochondrion | 8.48 | 28.5 |
| KRH14525 | Soybean | nucleus | 22.18 | 27.41 |
| KRH73592 | Soybean | nucleus | 21.77 | 26.94 |
| KRH12910 | Soybean | cytosol, nucleus | 13.49 | 26.04 |
| KRH69386 | Soybean | cytosol | 4.59 | 25.1 |
| KRG97372 | Soybean | nucleus | 16.2 | 24.1 |
| KRH54662 | Soybean | nucleus | 16.62 | 22.85 |
| KRH74752 | Soybean | nucleus | 16.34 | 22.77 |
| KRH40933 | Soybean | cytosol | 9.39 | 22.17 |
| KRH05918 | Soybean | nucleus | 17.52 | 21.05 |
| KRH17401 | Soybean | nucleus | 17.52 | 20.95 |
| KRH23170 | Soybean | nucleus | 16.34 | 18.49 |
| KRH10165 | Soybean | nucleus | 16.2 | 18.32 |
| KRH76262 | Soybean | nucleus | 14.6 | 15.9 |
| KRH65271 | Soybean | nucleus | 14.6 | 15.88 |
| KRG97543 | Soybean | nucleus, plastid | 15.92 | 13.24 |
| KRH31333 | Soybean | nucleus, plastid | 15.51 | 12.85 |
Protein Annotations
| Gene3D:1.20.120.1080 | EntrezGene:100788401 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A0R0F600 | EMBL:ACUP02010287 |
| EMBL:ACUP02010288 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | EnsemblPlantsGene:GLYMA_17G001100 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 | GO:GO:0004004 | GO:GO:0004386 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006139 | GO:GO:0006396 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | EnsemblPlants:KRH01863 | ProteinID:KRH01863 | ProteinID:KRH01863.1 | InterPro:P-loop_NTPase | PFAM:PF00270 |
| PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 |
| PANTHER:PTHR18934:SF190 | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 |
| UniParc:UPI0003DECAF5 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:94725..156413
Molecular Weight (calculated)
160666.0 Da
IEP (calculated)
6.447
GRAVY (calculated)
-0.324
Length
1438 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPKKNKQKA KAQSGPKLQI SAENENRLRR LLLNSARPTT ATAADDTLTK AQKAKKLKAV YEKLSCEGFG NHQIELSLSA LREAATFESA LDWLCLNLPG
0101: NELPLKFSTG ISHYDQGGSV GVISNQPAVD AASITIEEEA PESPVLIRRQ WKNDDTLDSR LTSQADWIRQ YVEQQEEDES ESWEDDIFFD GRSAKHKPCE
0201: PRSYDVIAKE YLAARLEATK AKEKRDKNRQ EQAGHIIRKL KQELSALGLS DDSLALEHEH EISYTFKSER ASTGPEAVDC FKEKTPCDTE GLASGKTEVA
0301: ESDVESHSMV EHLVKSGSLV VHVEKDSAQG EVGDIELGGL FLEDASPSEI LPPDILKVQK QEKIRRLSEK NLDKLDGIWK KGDPQKIPKA VLHQLCQKSG
0401: WEAPKFDKIL GRGKIFSYTV SILRKASGRG KNRKAGGLVT LQLPDQNETV ESAEDAQNKV AAYALYKLFP DIPVHLPITE PYTLLIMKWM EGESSTNLED
0501: SEKNHRSGFV DSLLNDNSSA ATASVDVTDY KCLQNIGRLQ ENRNSTIACH QQFSQRETYI KERESADLRQ AQHSKMRTQR YQDMLNIRAT LPIAALKGDI
0601: LKLMEEHDFL VVCGETGSGK TTQVPQFILD DMIESGHGGY CNIICTQPRR IAAVSVAERV ADERCEPSPG SDGSLIGYQV RLDSARNEKT RLLFCTTGIL
0701: LRKLMGDQSL SGITHIIVDE VHERSLLGDF LLIVLKNLIE KQSTNSSGKL KIILMSATVD SSLFSRYFNN CPVVTAEGRT HPVTTYFLED IYDQIEYRLA
0801: SDSPASLTDG TFPKGQILQR DVVTNSRGKK NLVLSAWGDE SLLSEEHFNP YFVPSYYQLC SEQTQQNMKR LNEDVIDYDL LEDLICFIDE TCDEGAILVF
0901: LPGMSEINYL HDKLVASSQF GGPSSEWVIP LHSAVASSEQ KRVFLRPPGN IRKVVIATNI AETSITIDDV IYVIDCGKHK ENRYNPQKKL SSMVEDWISR
1001: ANATQRRGRA GRVKPGICFS LYTRHRFEKL MRPYQVPEML RMPLVELCLQ IKLLSLGYIK PFLSEALEPP KVEAMDSAIS LLYEVGALEG DEELTPLGHH
1101: LAKLPVDVLI GKMMLYGAMF GCLSPILSVA AFLSYKSPFV YPKDERQNVE RAKLTLLNDK LDGPGNTNDI DRQSDHLLMM TAYKRWERIL TEKGAKAAQK
1201: FCNSFFLSCS VMFMIREMRV QFGTLLADIG LITLPKDYQK NAKKIGSLDS WLSDVSQPFN IYAHHSSILK AILCAGLYPN VAAGEQGIVA AVLSSLKQSS
1301: SSASSGRTVW FDGRREVHIH PSSINNNSKG FQYPFLVFLE KVETNKVFLR DTSVISPYSI LLFGGSIDVL HQTGQLIIDG WLKLTAPAQI AVLFKELRLA
1401: LHSILKELIR KPENATVLNN EIIKSIITLL LEEGSIPQ
0101: NELPLKFSTG ISHYDQGGSV GVISNQPAVD AASITIEEEA PESPVLIRRQ WKNDDTLDSR LTSQADWIRQ YVEQQEEDES ESWEDDIFFD GRSAKHKPCE
0201: PRSYDVIAKE YLAARLEATK AKEKRDKNRQ EQAGHIIRKL KQELSALGLS DDSLALEHEH EISYTFKSER ASTGPEAVDC FKEKTPCDTE GLASGKTEVA
0301: ESDVESHSMV EHLVKSGSLV VHVEKDSAQG EVGDIELGGL FLEDASPSEI LPPDILKVQK QEKIRRLSEK NLDKLDGIWK KGDPQKIPKA VLHQLCQKSG
0401: WEAPKFDKIL GRGKIFSYTV SILRKASGRG KNRKAGGLVT LQLPDQNETV ESAEDAQNKV AAYALYKLFP DIPVHLPITE PYTLLIMKWM EGESSTNLED
0501: SEKNHRSGFV DSLLNDNSSA ATASVDVTDY KCLQNIGRLQ ENRNSTIACH QQFSQRETYI KERESADLRQ AQHSKMRTQR YQDMLNIRAT LPIAALKGDI
0601: LKLMEEHDFL VVCGETGSGK TTQVPQFILD DMIESGHGGY CNIICTQPRR IAAVSVAERV ADERCEPSPG SDGSLIGYQV RLDSARNEKT RLLFCTTGIL
0701: LRKLMGDQSL SGITHIIVDE VHERSLLGDF LLIVLKNLIE KQSTNSSGKL KIILMSATVD SSLFSRYFNN CPVVTAEGRT HPVTTYFLED IYDQIEYRLA
0801: SDSPASLTDG TFPKGQILQR DVVTNSRGKK NLVLSAWGDE SLLSEEHFNP YFVPSYYQLC SEQTQQNMKR LNEDVIDYDL LEDLICFIDE TCDEGAILVF
0901: LPGMSEINYL HDKLVASSQF GGPSSEWVIP LHSAVASSEQ KRVFLRPPGN IRKVVIATNI AETSITIDDV IYVIDCGKHK ENRYNPQKKL SSMVEDWISR
1001: ANATQRRGRA GRVKPGICFS LYTRHRFEKL MRPYQVPEML RMPLVELCLQ IKLLSLGYIK PFLSEALEPP KVEAMDSAIS LLYEVGALEG DEELTPLGHH
1101: LAKLPVDVLI GKMMLYGAMF GCLSPILSVA AFLSYKSPFV YPKDERQNVE RAKLTLLNDK LDGPGNTNDI DRQSDHLLMM TAYKRWERIL TEKGAKAAQK
1201: FCNSFFLSCS VMFMIREMRV QFGTLLADIG LITLPKDYQK NAKKIGSLDS WLSDVSQPFN IYAHHSSILK AILCAGLYPN VAAGEQGIVA AVLSSLKQSS
1301: SSASSGRTVW FDGRREVHIH PSSINNNSKG FQYPFLVFLE KVETNKVFLR DTSVISPYSI LLFGGSIDVL HQTGQLIIDG WLKLTAPAQI AVLFKELRLA
1401: LHSILKELIR KPENATVLNN EIIKSIITLL LEEGSIPQ
0001: MAPKKKPQKQ SNKAASSSSS SKSNYQKPSS GPKLQISAEN EDRLRRLLLN SGRSGPSIPA PISNSLSKAQ KTKKLNNVYE KLSCEGFVDD QIELALSSLR
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
Arabidopsis Description
DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I9Q5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.