Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G304100.1 | Wheat | nucleus, plastid | 98.53 | 98.53 |
| TraesCS2B01G320800.1 | Wheat | nucleus, plastid | 97.83 | 97.9 |
| Os04t0432200-00 | Rice | extracellular | 4.48 | 87.67 |
| KXG26332 | Sorghum | nucleus, plastid | 83.2 | 83.38 |
| Zm00001d003655_P006 | Maize | nucleus, plastid | 82.3 | 82.58 |
| GSMUA_Achr6P17860_001 | Banana | nucleus | 62.35 | 62.61 |
| VIT_12s0035g00800.t01 | Wine grape | nucleus | 53.04 | 55.37 |
| Solyc01g103690.2.1 | Tomato | nucleus | 54.37 | 54.03 |
| KRH01863 | Soybean | nucleus | 53.04 | 52.71 |
| CDY29164 | Canola | nucleus | 51.85 | 52.04 |
| CDY39917 | Canola | nucleus | 51.43 | 52.02 |
| AT1G58060.1 | Thale cress | nucleus | 52.97 | 51.88 |
| Bra027890.1-P | Field mustard | nucleus | 46.47 | 49.92 |
| AT1G58050.1 | Thale cress | nucleus | 47.87 | 48.27 |
| CDY63687 | Canola | nucleus, plastid | 33.31 | 42.88 |
| TraesCS1D01G148100.2 | Wheat | nucleus | 24.84 | 34.5 |
| TraesCS7D01G157100.1 | Wheat | plastid | 14.91 | 29.87 |
| TraesCS5D01G397600.1 | Wheat | nucleus | 23.72 | 29.48 |
| TraesCS4D01G181700.1 | Wheat | cytosol | 14.77 | 29.26 |
| TraesCS3D01G148100.1 | Wheat | nucleus | 14.28 | 29.1 |
| TraesCS4D01G074200.1 | Wheat | nucleus | 13.93 | 28.23 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 23.86 | 27.46 |
| TraesCS3D01G264900.1 | Wheat | plastid | 15.82 | 24.54 |
| TraesCS3D01G302800.2 | Wheat | plastid | 21.62 | 24.25 |
| TraesCS4D01G362600.1 | Wheat | nucleus | 17.56 | 24.0 |
| TraesCS1D01G243400.1 | Wheat | nucleus | 17.35 | 23.37 |
| TraesCS7D01G341800.1 | Wheat | nucleus | 16.1 | 21.26 |
| TraesCS4D01G147900.1 | Wheat | nucleus | 16.8 | 18.62 |
| TraesCS2D01G231900.1 | Wheat | nucleus | 17.49 | 17.82 |
| TraesCS3D01G112900.1 | Wheat | nucleus | 15.19 | 16.23 |
| TraesCS6D01G279300.1 | Wheat | nucleus | 14.28 | 15.38 |
| TraesCS5D01G087800.2 | Wheat | nucleus | 15.61 | 13.31 |
| TraesCS2D01G171200.2 | Wheat | nucleus | 15.82 | 12.94 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0016787 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF190 | SMART:SM00487 | SMART:SM00490 |
| SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | EnsemblPlantsGene:TraesCS2D01G302700 | EnsemblPlants:TraesCS2D01G302700.1 | TIGR:cd00046 |
| TIGR:cd00079 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:386485192..386505939
Molecular Weight (calculated)
158243.0 Da
IEP (calculated)
6.754
GRAVY (calculated)
-0.389
Length
1429 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAPKKKQPVS KQKHKPKPSA PSSSSSAAPR LEISSENERR LRQLLLNSST AGAPFPAPLD APGARAESRE QKGRRLRGVY DKLALEGFSS SQIEQALSAI
0101: PDSATFESVL DWLCFNLPGD ELPLKFASAA ASSSRAGTEG SVKVVSAAKD NWVPQSRGPV EEAKVSTEGL EIKIGRRQEE DVTLDDGRSS QAAWILQYME
0201: QQEEEEDANS NDSSTWEDRL AASFEVAETK PSRRKKKGKK ENSKNGNSKE NISQSVSPVL PNSEIASVED GQIDLGASEN KSPSLVHIDE GSNLQKEVPK
0301: NAGETCTKEV EEEEVELDNL FFEDSSAWEV VAPEILKQQQ IEKLSHDGYG HLLGNIDDVW KKGDCGKMPK AILQKFCQKL GWDAPKYSKT SEKDGKFIYA
0401: VNVLRGSTGR GKSRKAGGLT KIELPEKDEE YVSVQEAQSR VATFALYQLF ADLPLRQLLI EPYSSLVLRW QEGELEFSST SRVLDTEDSR RAGFVDMLLD
0501: MDAHNTLPYQ IRGAPEGRAS IDSPNDKETN SVYEKKEATL LNRAGSRPEQ AESTALKKQL EHKRKLPKYL KMLGARASLP IARLKNHFLQ LLKENDVIVV
0601: SGETGCGKTT QVPQFILDDM IESELGGNCN IVCTQPRRIA AISVAERVSD ERCESSPGSK DSLVGYQVRL DSARNERTKL LFCTTGILLR KLSGNKDLSD
0701: VTHVVVDEVH ERTILSDFLL IVLKSLVEKR SNQPGRKLKV ILMSATVDSS LFARYFGDCP VISVEGRTHP VSTHFLEDVY EKMEYCLALD SPASGAYFAQ
0801: HGEKWKHASS SVNNRRGMKN LVMSSWGDES MLSENYVNPH YSSDCYQSYS ERTNLNLKRL NEDVIDFDLL EDLICYIDEN CPSGAVLVFL PGVAEIEMLI
0901: DRLSASVRFK GASSDWILPL HSMLSPTDQR KVFQSPPENI RKVILATDIA ETSITIDDVV YVVDTGKHKE NRYNPQKKMS SIVEDWISRA NAKQRRGRAG
1001: RVRPGLCFCL YTHHRFEKLM RPFQVPEMLR MPLTELCLQI KSLHLGDIKS FLLKAVEPPK EEAISSAIDL LFKVGAFEGH EELSPLGYHL AKLPVDVLIG
1101: KMMLYGAIFG CLSPVLSVAA FLSYKSPFIS PKDEKQNVEK AKAALLNENL DGSTSIIDNK QSDHLLMVIA YNKWSRILQE HGARSAHQFC RSFYLNSTVM
1201: YMIRDMRLQY GSLLADIGLV DLPKDNLNQM NGNRKSNLES WFANISLPFN LYAGYTSVIK SVISAGLYPN VAATLEGVDP GALGGRKPSD VLFGKDRPRW
1301: YDGRREVHIH PSSVNHSLKS VQYPFLVFLE KVETSKVFLR DTSVISPYSL LXXXXXXXXX XQAGVVIIDG WLRLTAAAQT AVLFKQLRIT LDAVLKELTR
1401: KPEMATFVDN EVVRSIIHLL LEEEKAQQA
0101: PDSATFESVL DWLCFNLPGD ELPLKFASAA ASSSRAGTEG SVKVVSAAKD NWVPQSRGPV EEAKVSTEGL EIKIGRRQEE DVTLDDGRSS QAAWILQYME
0201: QQEEEEDANS NDSSTWEDRL AASFEVAETK PSRRKKKGKK ENSKNGNSKE NISQSVSPVL PNSEIASVED GQIDLGASEN KSPSLVHIDE GSNLQKEVPK
0301: NAGETCTKEV EEEEVELDNL FFEDSSAWEV VAPEILKQQQ IEKLSHDGYG HLLGNIDDVW KKGDCGKMPK AILQKFCQKL GWDAPKYSKT SEKDGKFIYA
0401: VNVLRGSTGR GKSRKAGGLT KIELPEKDEE YVSVQEAQSR VATFALYQLF ADLPLRQLLI EPYSSLVLRW QEGELEFSST SRVLDTEDSR RAGFVDMLLD
0501: MDAHNTLPYQ IRGAPEGRAS IDSPNDKETN SVYEKKEATL LNRAGSRPEQ AESTALKKQL EHKRKLPKYL KMLGARASLP IARLKNHFLQ LLKENDVIVV
0601: SGETGCGKTT QVPQFILDDM IESELGGNCN IVCTQPRRIA AISVAERVSD ERCESSPGSK DSLVGYQVRL DSARNERTKL LFCTTGILLR KLSGNKDLSD
0701: VTHVVVDEVH ERTILSDFLL IVLKSLVEKR SNQPGRKLKV ILMSATVDSS LFARYFGDCP VISVEGRTHP VSTHFLEDVY EKMEYCLALD SPASGAYFAQ
0801: HGEKWKHASS SVNNRRGMKN LVMSSWGDES MLSENYVNPH YSSDCYQSYS ERTNLNLKRL NEDVIDFDLL EDLICYIDEN CPSGAVLVFL PGVAEIEMLI
0901: DRLSASVRFK GASSDWILPL HSMLSPTDQR KVFQSPPENI RKVILATDIA ETSITIDDVV YVVDTGKHKE NRYNPQKKMS SIVEDWISRA NAKQRRGRAG
1001: RVRPGLCFCL YTHHRFEKLM RPFQVPEMLR MPLTELCLQI KSLHLGDIKS FLLKAVEPPK EEAISSAIDL LFKVGAFEGH EELSPLGYHL AKLPVDVLIG
1101: KMMLYGAIFG CLSPVLSVAA FLSYKSPFIS PKDEKQNVEK AKAALLNENL DGSTSIIDNK QSDHLLMVIA YNKWSRILQE HGARSAHQFC RSFYLNSTVM
1201: YMIRDMRLQY GSLLADIGLV DLPKDNLNQM NGNRKSNLES WFANISLPFN LYAGYTSVIK SVISAGLYPN VAATLEGVDP GALGGRKPSD VLFGKDRPRW
1301: YDGRREVHIH PSSVNHSLKS VQYPFLVFLE KVETSKVFLR DTSVISPYSL LXXXXXXXXX XQAGVVIIDG WLRLTAAAQT AVLFKQLRIT LDAVLKELTR
1401: KPEMATFVDN EVVRSIIHLL LEEEKAQQA
0001: MAPKKKPQKQ SNKAASSSSS SKSNYQKPSS GPKLQISAEN EDRLRRLLLN SGRSGPSIPA PISNSLSKAQ KTKKLNNVYE KLSCEGFVDD QIELALSSLR
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
0101: DGATFEAALD WLCLNLPSHE LPVKFSTGAS RFPSTGGSVG VISTSRDDWN DSTDSSVRVE EEEPAVFVRV KGKQDEEDTL SSDKSSQADW IRQYMMRQEE
0201: EELECWEDEV DGIDPRNKVS GPRPFDVIAK EYYSARSDAI KAKEKRDKRG QEQAGLAIRK LKQEISDLGL SEAMLESEFQ REHAFESATE QESTCPISDN
0301: LHESVDADDV SVQMLDNLTL NTNPAESYES EEIQTKALPS SSSGQDFVAS DEDSEDVELG DTFFEEIPPS EISPHELLEL QKEEKMRELR SEKNLGKLDG
0401: IWKKGEAQKI PKAFLHQLCQ RSGWEAPKFN KETGEGRNFS YTVSILRKAS GRGKNRQAGG LVTLQLPPKD ENFESIEDAQ NKVAAFALHK LFSDLPVHFA
0501: ITEPYASLVL IWKQEELLCT TIQSTEEDRR ANFVDKLLEE DSFSLTTSSS SFENSLPLVD SYVKDKDDLG VVKSNNRAKR DSYIEAECLS LQRKQENKKR
0601: TQKYKDMLKT RTALPISEVK NGILQHLKEK DVLVVCGETG SGKTTQVPQF ILDDMIDSGH GGYCNIICTQ PRRIAAISVA QRVADERCES SPGLDDSLVG
0701: YQVRLESARS DKTRLLFCTT GILLRKLAGD RTLNDVTHII VDEVHERSLL GDFLLIILKS LIEKQSCDNT SRKLKVILMS ATVDADLFSR YFGHCPVITA
0801: QGRTHPVTTH FLEEIYESIN YLLAPDSPAA LRSDTSIKDK LGSVNDRRGK KNLVLAGWGD DYLLSEDCLN PFYVSSNYNS YSDQTQQNLK RLNEDRIDYE
0901: LLEELICHID DTCEEGAILI FLPGVAEIYM LLDMLAASYR FRGPAADWLL PLHSSIASSE QRKVFLRPPK GLRKVIAATN IAETSITIDD VVYVIDSGKH
1001: KENRYNPQKK LSSMVEDWIS QANARQRTGR AGRVKPGICF SLYTRYRFEK LMRPYQVPEM LRMPLVELCL QIKLLGLGHI KPFLSRALEP PSEGAMTSAI
1101: SLLHEVGAVE GDEELTPLGH HLAKLPVDVL IGKMLLYGGI FGCLSPILSI AAFLSYKSPF IYPKDEKQNV DRVKLALLSD NGVSSSDLNN NDRQSDHLLM
1201: MVAYDKWVKI LQERGMKAAQ RFCESKFLSS SVMRMIRDMR VQFGTLLADI GLINLPKTGE FSGRKKENLD VWFSDPTQPF NMYSQQPEVV KAILCAGLYP
1301: NIAANDKGIT ETTFNSLTKQ GNQTKSYSAW YDGRREVHIH PSSINSNFKA FQNPFLVFLE KVETNKVYLR DTTIVSPFSI LLFGGSINVH HQSGSVTIDG
1401: WLKVAAPAQT AVLFKELRLT LHSILKDLIR KPEKSGIVHN EVVKSMVHLL IEEGKPQHK
Arabidopsis Description
DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:F4I9Q5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.