Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018293.1-P | Field mustard | plasma membrane, vacuole | 96.97 | 80.0 |
| CDX97797 | Canola | nucleus | 87.88 | 74.13 |
| AT2G30800.1 | Thale cress | nucleus | 87.7 | 73.52 |
| CDY29644 | Canola | nucleus | 87.7 | 73.07 |
| CDY10215 | Canola | nucleus | 66.85 | 56.7 |
| VIT_12s0028g01050.t01 | Wine grape | nucleus | 60.7 | 53.7 |
| KRH73592 | Soybean | nucleus | 56.47 | 52.93 |
| Solyc07g044930.2.1 | Tomato | nucleus | 57.85 | 52.54 |
| KRH14525 | Soybean | nucleus | 55.83 | 52.23 |
| TraesCS3A01G298900.1 | Wheat | nucleus | 54.36 | 50.38 |
| TraesCS3B01G337600.3 | Wheat | nucleus | 55.19 | 50.29 |
| EES01523 | Sorghum | nucleus | 55.1 | 50.21 |
| GSMUA_Achr5P02110_001 | Banana | mitochondrion | 51.33 | 49.64 |
| Os01t0767700-01 | Rice | nucleus | 55.65 | 49.55 |
| TraesCS3D01G302800.2 | Wheat | plastid | 55.19 | 47.17 |
| HORVU3Hr1G074660.7 | Barley | plastid | 54.91 | 46.94 |
| Zm00001d012661_P002 | Maize | mitochondrion, plastid | 54.27 | 45.46 |
| CDY68405 | Canola | nucleus | 18.73 | 30.45 |
| CDX84588 | Canola | plastid, vacuole | 28.93 | 30.43 |
| CDX79642 | Canola | nucleus, vacuole | 28.93 | 30.43 |
| CDX74059 | Canola | nucleus | 7.16 | 29.55 |
| CDX83337 | Canola | cytosol | 19.47 | 29.32 |
| CDX95715 | Canola | cytosol | 19.47 | 29.24 |
| CDY11413 | Canola | nucleus | 18.92 | 28.69 |
| CDX76626 | Canola | nucleus | 18.92 | 28.69 |
| CDY34567 | Canola | nucleus | 17.08 | 28.05 |
| CDY57512 | Canola | nucleus | 29.2 | 28.02 |
| CDY17694 | Canola | nucleus | 29.2 | 28.02 |
| CDX78859 | Canola | nucleus | 17.81 | 27.79 |
| CDX74061 | Canola | cytosol | 8.17 | 27.73 |
| CDY36075 | Canola | nucleus | 17.08 | 27.6 |
| CDX99466 | Canola | nucleus | 17.72 | 27.57 |
| CDY11762 | Canola | nucleus | 17.81 | 27.56 |
| CDX90112 | Canola | nucleus | 17.81 | 27.52 |
| CDY23338 | Canola | cytosol | 10.65 | 27.49 |
| CDX93688 | Canola | plastid | 29.2 | 26.95 |
| CDY40601 | Canola | nucleus, plastid | 29.2 | 26.93 |
| CDX98799 | Canola | mitochondrion | 28.19 | 26.6 |
| CDX70187 | Canola | mitochondrion | 28.19 | 26.56 |
| CDX85017 | Canola | cytosol, plastid | 17.54 | 26.45 |
| CDY16154 | Canola | nucleus, plastid | 17.45 | 26.28 |
| CDY02818 | Canola | nucleus | 15.89 | 26.05 |
| CDY37024 | Canola | cytosol, mitochondrion | 7.71 | 25.93 |
| CDY32702 | Canola | nucleus | 16.07 | 25.29 |
| CDY60185 | Canola | nucleus | 18.92 | 23.98 |
| CDY40514 | Canola | nucleus | 18.82 | 23.81 |
| CDY32278 | Canola | endoplasmic reticulum | 19.28 | 20.11 |
| CDY26898 | Canola | nucleus | 19.28 | 20.11 |
| CDY39917 | Canola | nucleus | 25.44 | 19.6 |
| CDY29164 | Canola | nucleus | 25.62 | 19.59 |
| CDY23802 | Canola | nucleus | 9.18 | 19.05 |
| CDX83624 | Canola | nucleus | 19.38 | 18.92 |
| CDY13640 | Canola | nucleus | 19.47 | 18.84 |
| CDY63687 | Canola | nucleus, plastid | 18.18 | 17.84 |
| CDX85676 | Canola | nucleus | 19.83 | 17.31 |
| CDX91151 | Canola | nucleus | 19.83 | 17.29 |
| CDY48353 | Canola | nucleus | 17.63 | 15.7 |
| CDY34159 | Canola | nucleus | 17.54 | 15.44 |
| CDX91491 | Canola | nucleus | 0.73 | 12.7 |
| CDY51663 | Canola | nucleus | 0.73 | 12.7 |
| CDX78376 | Canola | plastid | 18.73 | 11.61 |
| CDX96996 | Canola | nucleus | 18.73 | 11.53 |
| CDX81170 | Canola | plastid | 18.64 | 11.51 |
| CDX69841 | Canola | plastid | 18.55 | 11.43 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.1370.50 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078FBM0 | UniProt:A0A078FBM0 |
| EnsemblPlants:CDY10756 | ProteinID:CDY10756 | ProteinID:CDY10756.1 | InterPro:DEAD/DEAH_box_helicase_dom | InterPro:DUF1605 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00048575001 | InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001374 |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR036867 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 |
| PFAM:PF01424 | PFAM:PF04408 | PFAM:PF07717 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 |
| PANTHER:PTHR18934:SF100 | InterPro:R3H_dom | InterPro:R3H_dom_sf | SMART:SM00487 | SMART:SM00490 | SMART:SM00847 |
| SUPFAM:SSF52540 | SUPFAM:SSF82708 | UniParc:UPI0004EE2E15 | SEG:seg | : | : |
Description
BnaA05g11800DBnaA05g11800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBM0]
Coordinates
chrLK032006:-:483113..488511
Molecular Weight (calculated)
120997.0 Da
IEP (calculated)
8.491
GRAVY (calculated)
-0.357
Length
1089 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGNKRSTSSK TFEPPLTKAT YTFEHNLSNI ERRVIHLMCR KMGIRSKSSG RGDQRCLSIY KRSHKNGWKS NREKLRCVSF PPGADAILQD LFTHYPPCDG
0101: DAAETSFNKY VGRSGKQGRW RDDDFFRKPQ ISCDDIVEKA ASLSSRLRKD KALQEISKLR SKLPIASFRD AITSAVESNQ VILISGETGC GKTTQVPQYL
0201: LDHMWSAKKE TCKIVCTQPR RISAMSVSER ISCERGESIG DNIGYKVRLQ SKGGRRSSVV FCTNGILLRV LVGKGSVSYV SDITHIIVDE IHERDCYSDF
0301: MLAIIRDLLP SNPHLRLILM SATLDAERFS GYFGGCPVVR VPGFTYPVRS LYLEDVLSIL KSGGDNNNLC STNLSIPVQN LTDEDKLALD EAIILAWTND
0401: EFDALLDLQA QQLLDKYMAT INPEQVDVSL ILQLVRKICG DSEDCGGAVL VFLPGWDDIN KTRQRLLDSP FFKDSSKFDI ICLHSMVPAG EQKKVFSRPP
0501: RGCRKIVLAT NIAESAVTID DVVYVIDSGR MKEKSYDPYN NVSTLQSSWV SKANAKQREG RAGRCQPGIC YHLYSRLRAA SMPEFKVPEI KRMPVEELCL
0601: QVKILDPNCK ANDFLQKLLD PPVDQSIANA LSILQNIGAL TPEEELTELG EKFGHLPVHP LISKMLFFAV LVNCLDPALT LACAADYKEP FTMPMSPVER
0701: QKAAAAKLEL ASLCGGDSDH LAVVAAFECW KNAKEKGLLA EFCSQYFVSP SAMKMLDQMR SQLESELKRH GIIPSDISSC SQNSRDPGIL RAVLAVGLYP
0801: MVGRLCPSFG KNRRSIVETA SGAKVRVHSL SNNFNLSSRE YDESLVVFDE ITRGDGGMHI RNCTVARDLP LLLISTEIAV APIESSDVDD NSSNEERINI
0901: NNVESRGGEK VMSSPENSVK LVVDRWLPFK TTALEVAQMY ILRERLTASI LFKVRHPREN LPPHLGASMH AIACILSYDG HAGLSSKHSK TEMYETGGRE
1001: EKPNSFLSSL FWQQSNNNQR KPESANSLVS GNKKENKPSD QVCGNQQPNT APREAAVSIA KNQSSKKSKT RSGNNSDSGK KKRRVCSKD
0101: DAAETSFNKY VGRSGKQGRW RDDDFFRKPQ ISCDDIVEKA ASLSSRLRKD KALQEISKLR SKLPIASFRD AITSAVESNQ VILISGETGC GKTTQVPQYL
0201: LDHMWSAKKE TCKIVCTQPR RISAMSVSER ISCERGESIG DNIGYKVRLQ SKGGRRSSVV FCTNGILLRV LVGKGSVSYV SDITHIIVDE IHERDCYSDF
0301: MLAIIRDLLP SNPHLRLILM SATLDAERFS GYFGGCPVVR VPGFTYPVRS LYLEDVLSIL KSGGDNNNLC STNLSIPVQN LTDEDKLALD EAIILAWTND
0401: EFDALLDLQA QQLLDKYMAT INPEQVDVSL ILQLVRKICG DSEDCGGAVL VFLPGWDDIN KTRQRLLDSP FFKDSSKFDI ICLHSMVPAG EQKKVFSRPP
0501: RGCRKIVLAT NIAESAVTID DVVYVIDSGR MKEKSYDPYN NVSTLQSSWV SKANAKQREG RAGRCQPGIC YHLYSRLRAA SMPEFKVPEI KRMPVEELCL
0601: QVKILDPNCK ANDFLQKLLD PPVDQSIANA LSILQNIGAL TPEEELTELG EKFGHLPVHP LISKMLFFAV LVNCLDPALT LACAADYKEP FTMPMSPVER
0701: QKAAAAKLEL ASLCGGDSDH LAVVAAFECW KNAKEKGLLA EFCSQYFVSP SAMKMLDQMR SQLESELKRH GIIPSDISSC SQNSRDPGIL RAVLAVGLYP
0801: MVGRLCPSFG KNRRSIVETA SGAKVRVHSL SNNFNLSSRE YDESLVVFDE ITRGDGGMHI RNCTVARDLP LLLISTEIAV APIESSDVDD NSSNEERINI
0901: NNVESRGGEK VMSSPENSVK LVVDRWLPFK TTALEVAQMY ILRERLTASI LFKVRHPREN LPPHLGASMH AIACILSYDG HAGLSSKHSK TEMYETGGRE
1001: EKPNSFLSSL FWQQSNNNQR KPESANSLVS GNKKENKPSD QVCGNQQPNT APREAAVSIA KNQSSKKSKT RSGNNSDSGK KKRRVCSKD
001: MSATLDAERF SGYFGGCPVV RVPGFTYPVR TLYLEDVLSI LKSGGDNHLS STNLSISDHK LDLTDEDKLA LDEAIILAWT NDEFDALLDL VSSRGSHEIY
101: NYQHQSTWLT PLMVFAGKGR ISDVCMLLSF GADWSLKSKD GMTALELAEA ENQLEAAQII REHADNSQSN SQQGQQLLDK YMATINPEQV DVSLIQQLMR
201: KICGDSEDGA ILVFLPGWDD INKTRQRLLE NPFFADSAKF DIICLHSMVP AGEQKKVFNR PPPGCRKIVL ATNIAESAVT IDDVVYVIDS GRMKEKSYDP
301: YNNVSTLQSS WVSKANAKQR QGRAGRCQPG ICYHLYSRLR AASMPDFKVP EIKRMPVEEL CLQVKILDPN CKTNDFLQKL LDPPVDQSIA NALSILQDIG
401: ALTPQEELTE LGEKFGHLPV HPLISKMLFF AVLVNCLDPA LTLACAADYK EPFTMPMSPV ERQKAAAAKL ELASLCGGDS DHLAVVAAFE CWKNAKGRGL
501: SAEFCSQYFV SPSAMKMLDQ MRSQLESELK RHGIIPNDIS SCSQNSRDPG ILRAVLAVGL YPMVGRLCPA FGNNRRTIVE TASGAKVRVH SLSNNFNLSS
601: KKYDESLLVF DEITRGDGGM HIRNCTVARD LPLLLISTEI AVAPTGSSDS DDSNEEEEDD EEVAANTNEE VAANTNEEGM DIHKEESRRG AKMMSSPENS
701: VKLVVDRWLP FRTTALEVAQ MYILRERLMA SILFKVTHPR EHLPPHLGAS MHAIAGILSY DGHAGLSCPP ESMVPKHSRT EMYDTGGWEE KPNSFLNSLF
801: WSLSLKENKH PSHTNRNQQH NYNMAPTEAA SIPRQQNYKQ RNPKATNNTD SGKKKEKMFV NPTNRINQPE AASTGKPSKH KSANSSGSSN KKENMPSDQA
901: YGNKQHNTVP REAAAPMAKN QSSKKTKTRS GNNSDSGKKK EQYIPKRQRE DKAEQK
101: NYQHQSTWLT PLMVFAGKGR ISDVCMLLSF GADWSLKSKD GMTALELAEA ENQLEAAQII REHADNSQSN SQQGQQLLDK YMATINPEQV DVSLIQQLMR
201: KICGDSEDGA ILVFLPGWDD INKTRQRLLE NPFFADSAKF DIICLHSMVP AGEQKKVFNR PPPGCRKIVL ATNIAESAVT IDDVVYVIDS GRMKEKSYDP
301: YNNVSTLQSS WVSKANAKQR QGRAGRCQPG ICYHLYSRLR AASMPDFKVP EIKRMPVEEL CLQVKILDPN CKTNDFLQKL LDPPVDQSIA NALSILQDIG
401: ALTPQEELTE LGEKFGHLPV HPLISKMLFF AVLVNCLDPA LTLACAADYK EPFTMPMSPV ERQKAAAAKL ELASLCGGDS DHLAVVAAFE CWKNAKGRGL
501: SAEFCSQYFV SPSAMKMLDQ MRSQLESELK RHGIIPNDIS SCSQNSRDPG ILRAVLAVGL YPMVGRLCPA FGNNRRTIVE TASGAKVRVH SLSNNFNLSS
601: KKYDESLLVF DEITRGDGGM HIRNCTVARD LPLLLISTEI AVAPTGSSDS DDSNEEEEDD EEVAANTNEE VAANTNEEGM DIHKEESRRG AKMMSSPENS
701: VKLVVDRWLP FRTTALEVAQ MYILRERLMA SILFKVTHPR EHLPPHLGAS MHAIAGILSY DGHAGLSCPP ESMVPKHSRT EMYDTGGWEE KPNSFLNSLF
801: WSLSLKENKH PSHTNRNQQH NYNMAPTEAA SIPRQQNYKQ RNPKATNNTD SGKKKEKMFV NPTNRINQPE AASTGKPSKH KSANSSGSSN KKENMPSDQA
901: YGNKQHNTVP REAAAPMAKN QSSKKTKTRS GNNSDSGKKK EQYIPKRQRE DKAEQK
Arabidopsis Description
HVT1DExH-box ATP-dependent RNA helicase DExH6 [Source:UniProtKB/Swiss-Prot;Acc:F4INY4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.