CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040328.1-P	Field mustard	cytosol, mitochondrion	65.74	99.53
Os08t0335000-00	Rice	cytosol, nucleus	40.12	35.42
CDY23338	Canola	cytosol	39.81	30.57
GSMUA_Achr4P23370_001	Banana	nucleus	68.52	29.6
CDY26898	Canola	nucleus	93.52	29.02
CDY32278	Canola	endoplasmic reticulum	93.21	28.93
CDX91491	Canola	nucleus	5.56	28.57
CDY51663	Canola	nucleus	5.56	28.57
AT1G32490.1	Thale cress	cytosol	91.98	28.54
CDY40514	Canola	nucleus	64.51	24.27
CDY60185	Canola	nucleus	63.89	24.1
TraesCS4D01G362600.1	Wheat	nucleus	76.85	23.8
TraesCS4B01G374800.1	Wheat	nucleus	76.85	23.8
KXG30390	Sorghum	nucleus	76.85	23.8
EES02741	Sorghum	nucleus	75.93	23.52
CDY68405	Canola	nucleus	45.06	21.79
CDX76626	Canola	nucleus	45.99	20.75
CDY11413	Canola	nucleus	45.99	20.75
HORVU4Hr1G088270.17	Barley	mitochondrion	68.83	20.65
CDX83337	Canola	cytosol	44.75	20.06
CDX95715	Canola	cytosol	44.75	20.0
CDX78859	Canola	nucleus	42.59	19.77
CDX99466	Canola	nucleus	42.59	19.71
Zm00001d049980_P001	Maize	plasma membrane	40.74	18.91
CDY23802	Canola	nucleus	30.56	18.86
CDY02818	Canola	nucleus	36.11	17.62
CDY36075	Canola	nucleus	36.42	17.51
CDY32702	Canola	nucleus	36.73	17.2
CDX85017	Canola	cytosol, plastid	37.65	16.9
CDY11762	Canola	nucleus	36.42	16.76
CDY34567	Canola	nucleus	34.26	16.74
CDX90112	Canola	nucleus	36.42	16.74
CDY16154	Canola	nucleus, plastid	37.35	16.74
CDX74059	Canola	nucleus	13.58	16.67
CDX83624	Canola	nucleus	48.46	14.08
CDY13640	Canola	nucleus	48.46	13.96
CDX74061	Canola	cytosol	13.58	13.71
CDX85676	Canola	nucleus	44.75	11.62
CDX91151	Canola	nucleus	44.75	11.61
CDX79642	Canola	nucleus, vacuole	29.63	9.28
CDX84588	Canola	plastid, vacuole	29.63	9.28
CDY48353	Canola	nucleus	32.1	8.5
CDY34159	Canola	nucleus	32.41	8.49
CDY57512	Canola	nucleus	29.63	8.46
CDY17694	Canola	nucleus	29.63	8.46
CDX93688	Canola	plastid	29.94	8.22
CDY40601	Canola	nucleus, plastid	29.63	8.13
CDX98799	Canola	mitochondrion	28.4	7.97
CDX70187	Canola	mitochondrion	28.4	7.96
CDY10756	Canola	nucleus	25.93	7.71
CDX97797	Canola	nucleus	25.93	6.51
CDY29644	Canola	nucleus	26.23	6.5
CDY10215	Canola	nucleus	24.69	6.23
CDY39917	Canola	nucleus	25.93	5.94
CDY29164	Canola	nucleus	25.93	5.9
CDX69841	Canola	plastid	32.1	5.89
CDX96996	Canola	nucleus	32.1	5.88
CDX78376	Canola	plastid	30.86	5.69
CDX81170	Canola	plastid	30.56	5.62
CDY63687	Canola	nucleus, plastid	12.96	3.78

Protein Annotations

Gene3D:1.20.120.1080	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078HI53	UniProt:A0A078HI53	EnsemblPlants:CDY37024
ProteinID:CDY37024	ProteinID:CDY37024.1	ncoils:Coil	InterPro:DUF1605	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00063227001
InterPro:Helicase-assoc_dom	InterPro:P-loop_NTPase	PFAM:PF04408	PFAM:PF07717	PANTHER:PTHR18934	PANTHER:PTHR18934:SF117
SMART:SM00847	SUPFAM:SSF52540	UniParc:UPI0004EE3CE2	SEG:seg	:	:

Description

BnaA04g26020DBnaA04g26020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HI53]

Coordinates

chrLK032390:+:58214..59535

Molecular Weight (calculated)

36723.2 Da

IEP (calculated)

9.754

GRAVY (calculated)

-0.441

Length

324 amino acids

Sequence
(BLAST)

001: MLKLHREFSM KYVVDPGFSK MKSYNPRTGM ESLLVTPISK ASATQRAGRA GRTSAGKCYR LYTAFNYKND LEESTVPEVQ RTNLASVVGE LTKAGRRMAE
101: FPLDPMLSKM IVVSDKYKCS DEVISIAAML SVGGSVFYRP KDKQVHADNA RMNFHVGNVG DHIALLKVYS SWKETNYSTQ WCYENYVQVR SMKRASDIRE
201: QLEGLVERVE IEISSSMNEL DSVRKSIVAG FFPHSAKLQK NGSYRTVKHP QTVHIHPNSG LSQVLPRWVV YHELVLTSKE YMRQVTELKP EWLIELAPHY
301: YQLKDVEDDA SKKMPKGAGK AAAI

Best Arabidopsis Sequence Match ( AT1G32490.1 )
(BLAST)

0001: MASNDLKTWV SDKLMMLLGY SQAAVVNYLI AMAKKTKSPT ELVGELVDYG FSSSGDTRSF AEEIFARVPR KTAGVNLYQK HEAEAAMLVR KQKTYALLDA
0101: DDDEDEVVVE KKSSVSESRK SDKGKKRFRK KSGQSDESDG EVAVREDSRH VRRKVSEEDD GSESEEERVR DQKEREELEQ HLKDRDTART RKLTEQTLSK
0201: KEKEEAVRRA NALEKDDLYS LRKVSRQEYL KKREQKKLDE LRDEIEDEQY LFGGEKLTET ELREFRYKKE LYDLVKKRTQ DEDNVEEYRI PDAYDQEGGV
0301: DQEKRFSVAV QRYRDLDSTE KMNPFAEQEA WEDHQIGKAT LKFGAKNKQA SDDYQFVFED QINFIKESVM AGENYEDAMD AKQKSQDLAE KTALEELQEV
0401: RRSLPIYTYR DQLLKAVEEH QVLVIVGDTG SGKTTQIPQY LHEAGYTKRG KVGCTQPRRV AAMSVAARVA QEMGVKLGHE VGYSIRFEDC TSDKTVLKYM
0501: TDGMLLRELL GEPDLASYSV VIVDEAHERT LSTDILFGLV KDIARFRPDL KLLISSATMD AEKFSDYFDT APIFSFPGRR YPVEINYTSA PEADYMDAAI
0601: VTILTIHVRE PLGDILVFFT GQEEIETAEE ILKHRIRGLG TKIRELIICP IYANLPSELQ AKIFEPTPEG ARKVVLATNI AETSLTIDGI KYVVDPGFSK
0701: MKSYNPRTGM ESLLITPISK ASATQRAGRA GRTSPGKCYR LYTAFNYNND LEENTVPEVQ RTNLASVVLA LKSLGIHDLI NFDFMDPPPA EALVKSLELL
0801: FALGALNKLG ELTKAGRRMA EFPLDPMLSK MIVVSDKYKC SDEIISIAAM LSIGGSIFYR PKDKQVHADN ARMNFHTGNV GDHIALLKVY SSWKETNFST
0901: QWCYENYIQV RSMKRARDIR DQLEGLLERV EIDISSNLNE LDSVRKSIVA GFFPHTAKLQ KNGSYRTVKH PQTVHIHPNS GLSQVLPRWV VYHELVLTSK
1001: EYMRQVTELK PEWLIELAPH YYQLKDVEDA ASKKMPKGAG KAAM

Arabidopsis Description

ESP3ESP3 [Source:UniProtKB/TrEMBL;Acc:A0A178W3A5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.