Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 4
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G021300.1 | Wheat | extracellular | 97.43 | 97.67 |
| TraesCS3B01G024900.1 | Wheat | mitochondrion | 97.43 | 97.43 |
| TraesCS3D01G025600.1 | Wheat | mitochondrion, nucleus, plastid | 96.15 | 96.54 |
| Os01t0118100-01 | Rice | cytosol, mitochondrion, nucleus | 60.63 | 92.42 |
| KXG32067 | Sorghum | mitochondrion | 87.73 | 88.15 |
| VIT_17s0000g03030.t01 | Wine grape | nucleus | 65.12 | 76.82 |
| Zm00001d040082_P003 | Maize | plastid | 83.64 | 74.13 |
| GSMUA_Achr3P20920_001 | Banana | mitochondrion, nucleus | 72.49 | 72.26 |
| KRH60477 | Soybean | plastid | 64.31 | 67.97 |
| KRH41772 | Soybean | plastid | 63.83 | 67.63 |
| CDY40601 | Canola | nucleus, plastid | 63.35 | 66.89 |
| Bra018747.1-P | Field mustard | plastid | 63.27 | 66.86 |
| CDX93688 | Canola | plastid | 63.27 | 66.86 |
| Solyc03g118920.2.1 | Tomato | mitochondrion, nucleus | 63.75 | 66.19 |
| AT1G48650.2 | Thale cress | nucleus, plastid | 63.83 | 66.0 |
| HORVU5Hr1G094990.5 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 55.01 | 59.65 |
| HORVU1Hr1G039880.1 | Barley | nucleus | 35.93 | 47.41 |
| HORVU4Hr1G052730.3 | Barley | cytosol | 18.68 | 32.32 |
| HORVU3Hr1G028550.17 | Barley | cytosol | 17.16 | 30.7 |
| HORVU3Hr1G074660.7 | Barley | plastid | 27.43 | 26.84 |
| HORVU7Hr1G032080.3 | Barley | plastid | 17.4 | 26.5 |
| HORVU1Hr1G056370.1 | Barley | nucleus | 18.93 | 22.2 |
| HORVU1Hr1G056400.1 | Barley | nucleus | 18.93 | 22.16 |
| HORVU4Hr1G088270.17 | Barley | mitochondrion | 19.01 | 21.94 |
| HORVU0Hr1G007860.1 | Barley | nucleus | 21.17 | 21.26 |
| HORVU2Hr1G047870.2 | Barley | nucleus | 19.25 | 19.0 |
| HORVU0Hr1G039590.6 | Barley | nucleus | 18.36 | 17.79 |
| HORVU5Hr1G019730.1 | Barley | nucleus, plastid | 19.49 | 14.23 |
| HORVU2Hr1G030040.17 | Barley | nucleus | 19.33 | 13.21 |
Protein Annotations
| Gene3D:1.20.120.1080 | Gene3D:3.30.160.20 | Gene3D:3.40.50.300 | MapMan:35.1 | UniProt:A0A287JXW0 | InterPro:DEAD/DEAH_box_helicase_dom |
| InterPro:DUF1605 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003824 |
| GO:GO:0004386 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | EnsemblPlantsGene:HORVU3Hr1G002800 | EnsemblPlants:HORVU3Hr1G002800.8 |
| InterPro:Helicase-assoc_dom | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014720 |
| InterPro:P-loop_NTPase | PFAM:PF00035 | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF04408 | PFAM:PF07717 |
| PFscan:PS50137 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR18934 | PANTHER:PTHR18934:SF192 | SMART:SM00358 |
| SMART:SM00487 | SMART:SM00490 | SMART:SM00847 | SUPFAM:SSF52540 | SUPFAM:SSF54768 | UniParc:UPI000B481BB9 |
| InterPro:dsRBD_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:7368000..7376638
Molecular Weight (calculated)
140014.0 Da
IEP (calculated)
9.059
GRAVY (calculated)
-0.457
Length
1247 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLASTVLRG RLRPLRRPRP LIMPSPLFLS RNPSPGPTTT NSPNLSSPSG AAAMSTSGVY VPPMRRLRSV IASTNGNLAP PPAVQPAWTP DWRADGRSLS
0101: PPSPPQPQQR RAAQLPPRPP PQMQPLRQQS AGYSRYAYDD FSEEDSDREM DRTSVSSKGG ASTLENVDEW KWKLHMLLRN DNEQEIMSRE KKDRRDFDQL
0201: AQLADRMGLH SRQYSRIIVF SKVPLPNYRS DLDDKRPQRE VSIPSGLQRE VDALLADYLA RKRTESGNFP NAAFSRSSST DSFATDESFY EQQDNQTSTN
0301: VVMERIQRRK SLQLRNQQAA WQESNDGQSM MEFRRSLPAQ KERQSLLEAI SQNQVVVVSG ETGCGKTTQL PQYILESEIE AARGATCSII CTQPRRISAI
0401: SVSERVAAER GEKIGESVGY KVRLEGMRGR DTRLLFCTTG VLLRRLLVDR SLKGVTHVIV DEIHERGMNE DFLLIVLKDL LPRRPELRLV LMSATLNAEM
0501: FSSYFGGAPM IHIPGFTYPV RSRFLEDILE ITGHRLTPYN QIDDYGQEKS WKMQKQALRK RKSQIASVVE DAVKAADLRD YSPQTRDSLS CWNPDSIGFN
0601: LIENVLCHIC QKERDGAVLV FMTGWDDINT LKDQLQSNPL LGDPSKVLLL ACHGSMASSE QKLIFDKPEP GVRKIVLATN LAETSITIND VVFVVDCGKA
0701: KETSYDALNN TPCLLPTWIS KASARQRRGR AGRVQSGECF HLYPQCVYNV FADYQLPELL RTPLQSLCLQ IKSLRLGSIS EFLSRALQSP ESLSVQNAIE
0801: YLKVIGAFDQ NEELTVLGKH LSMLPVEPKL GKMLIFGAIF NCLDPILTIV AGLSVRDPFM TPFDKKDLAE SAKLQFSCRD YSDHLAIVRA YDGWREAERD
0901: RNGYDYCWRN FLSAQTLKAL DSLRRQFLFL LKDTGLIDEN MTMCNKWSRD ENLVRAIICA GLYPGVSSVV NKEKSVSLKT MEDGQVMLYS SSVNGKEAKI
1001: PFPWLVFNEK VKVNSVFLRD STAISDSILL LFGGNIQQGG LDGHLKMLGG YLEFFMSRDL ASTYLNLKGE LENLIHHKLQ NPRIDIQTSE ELLSAVRLLV
1101: TEDPCSGRFV YGRQEPRSKK AKTMISSASM VSMDRGGGGG HGGDNPKNQL QTLLTRAGHD NPSYKTKQIK NTLFRSTVEF NGMEFVGQPC ANKKLAEKDA
1201: AGEAINWLTG GEAPPTTTNA RDQQAADHMS MLTKPAPRRR RHHHRRS
0101: PPSPPQPQQR RAAQLPPRPP PQMQPLRQQS AGYSRYAYDD FSEEDSDREM DRTSVSSKGG ASTLENVDEW KWKLHMLLRN DNEQEIMSRE KKDRRDFDQL
0201: AQLADRMGLH SRQYSRIIVF SKVPLPNYRS DLDDKRPQRE VSIPSGLQRE VDALLADYLA RKRTESGNFP NAAFSRSSST DSFATDESFY EQQDNQTSTN
0301: VVMERIQRRK SLQLRNQQAA WQESNDGQSM MEFRRSLPAQ KERQSLLEAI SQNQVVVVSG ETGCGKTTQL PQYILESEIE AARGATCSII CTQPRRISAI
0401: SVSERVAAER GEKIGESVGY KVRLEGMRGR DTRLLFCTTG VLLRRLLVDR SLKGVTHVIV DEIHERGMNE DFLLIVLKDL LPRRPELRLV LMSATLNAEM
0501: FSSYFGGAPM IHIPGFTYPV RSRFLEDILE ITGHRLTPYN QIDDYGQEKS WKMQKQALRK RKSQIASVVE DAVKAADLRD YSPQTRDSLS CWNPDSIGFN
0601: LIENVLCHIC QKERDGAVLV FMTGWDDINT LKDQLQSNPL LGDPSKVLLL ACHGSMASSE QKLIFDKPEP GVRKIVLATN LAETSITIND VVFVVDCGKA
0701: KETSYDALNN TPCLLPTWIS KASARQRRGR AGRVQSGECF HLYPQCVYNV FADYQLPELL RTPLQSLCLQ IKSLRLGSIS EFLSRALQSP ESLSVQNAIE
0801: YLKVIGAFDQ NEELTVLGKH LSMLPVEPKL GKMLIFGAIF NCLDPILTIV AGLSVRDPFM TPFDKKDLAE SAKLQFSCRD YSDHLAIVRA YDGWREAERD
0901: RNGYDYCWRN FLSAQTLKAL DSLRRQFLFL LKDTGLIDEN MTMCNKWSRD ENLVRAIICA GLYPGVSSVV NKEKSVSLKT MEDGQVMLYS SSVNGKEAKI
1001: PFPWLVFNEK VKVNSVFLRD STAISDSILL LFGGNIQQGG LDGHLKMLGG YLEFFMSRDL ASTYLNLKGE LENLIHHKLQ NPRIDIQTSE ELLSAVRLLV
1101: TEDPCSGRFV YGRQEPRSKK AKTMISSASM VSMDRGGGGG HGGDNPKNQL QTLLTRAGHD NPSYKTKQIK NTLFRSTVEF NGMEFVGQPC ANKKLAEKDA
1201: AGEAINWLTG GEAPPTTTNA RDQQAADHMS MLTKPAPRRR RHHHRRS
0001: MQLYSAIFRG HIRPNAVVGA ASMFIQHNSI QLHRSPKLLL RPSSVVRSLH CRRSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL PYFQRQNSGY
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKKRVGR LHKKKSREVL
1201: TDEILS
0101: GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD
0201: DKRPQREVVL PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP
0301: AYKEKDALLK AIAANQVVVV SGETGCGKTT QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR GRDTRLLFCT
0401: TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT
0501: YNQIDDYGEE KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC HIVKGERPGA VLVFMTGWDD INSLKNQLEA
0601: HSLLGDPNKV LLLACHGSMA SSEQRLIFDR PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR RGRAGRVMPG
0701: ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG
0801: AIFNCLDPVM TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC WKNFLSSQTL KAMDSMRKQF FNLLKEASLI
0901: DNIEGCSKLS HDEHLVRAII CAGMFPGVCS VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV LLLFGDKISS
1001: GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN
1101: NKNQLQTLLA RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS LNDLNHMSML LKKNKKRVGR LHKKKSREVL
1201: TDEILS
Arabidopsis Description
DEA(D/H)-box RNA helicase family protein [Source:UniProtKB/TrEMBL;Acc:F4HYJ6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.